| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221785
Identifier: 183221785
GI number: 183221785
Start: 2488320
End: 2489162
Strand: Direct
Name: 183221785
Synonym: LEPBI_I2415
Alternate gene names: NA
Gene position: 2488320-2489162 (Clockwise)
Preceding gene: 183221784
Following gene: 183221793
Centisome position: 69.13
GC content: 39.62
Gene sequence:
>843_bases ATGGCAACACTGGAAGAATACCTATCCCAAATCAAAGATCTGACGATTGTTCCGCCAGTCTTACTCTCCGTACTTTCCCT AGACGATGATAATGAAATTTCATTTGGGGAATTAGAGAAAAAAGTCCAATCAGACCAAGTCCTTGTCGCAAGGCTTTTGA AATTGGCGAATTCTCCCTTTTTCTCTCGTGGGAATCCTGTCGCCAATATGAAACAAGTCATCACACGTCTTGGATTCAAA ACTGTAAGAAGTATGGTTGCGATGTCGATGACCGATTCGCTCTTTAGCCAAGGGAATTATAAAAAATTTCGAGATGAAGT TTGGGATCATTCCGTTGCGAAAGGGATTTTTGCACAAATCCTCTGTGAAGAAAAAAAGTTCAAAAAAGAAGCAGAACTTG CCATCACATGTGGCCTCATGCAAGACTTAGGGCGCATTGTACTCAATACAATTGATCGAAAGAAGTATGTAGAAGTTTTA ACTGAATTCCAAACTTCCGATGTGAGCCTTGTCTCTCTTGAAAAAAAAGCCTTCGGTGTGGATTCATATGAGATGGGGAG TGCCGCTGCCAAACTTTGGAAAATGCCAACGATCATCATCACATCCATTGACGATTTGTCGAAACCAGTCGCAGAACAAT CATCACTTGGTCAAATCATAGGATTTGCGGGAGTGATTGCAAAACTTACAGGACATGGCAAACAAGAACCTGGGACTTTA GAAAAATTAGAAGAATACAAAACTTCATTGGGATTCGAAATTGAAGATGTAAAATCTTATCTTGCCGCTAAAGATGAAAA ACTGAAAACGAATGAATTGTATCAGTTCTGTAGCACATTATAA
Upstream 100 bases:
>100_bases CAAAGGAATCGAATTCGCGAGAATCGTCGCCAGATAAAGCGTAGTTTTTGGTTTCCATCGTCAGAAGATTTTAAATTCTG GCGTTAGGTTCAAAAAACGT
Downstream 100 bases:
>100_bases AAAATGTTAAATTGGTTTTACACTCAAAATACGATGTAGACCTTCTTTGCCTTTGATTTTCACAGGCTCCAATTCCTCAT ATCGGTATTTTTTGGAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Transduction Protein; HD Domain-Containing Protein; Response Regulator Receiver Modulated Diguanylate Cyclase; Diguanylate Cyclase; Metal-Dependent Phosphoesterase; HD Domain Protein; HDOD Domain Family; Chemotaxis Signal Transduction Protein; Phosphohydrolase; HDIG Domain-Containing Protein; HD-GYP Domain-Containing Protein; Two Component Response Regulator Protein; CheY-Like Response Regulator; Metal-Dependent Hydrolase HDOD; Transmembrane GGDEF Family Signalling Protein; HDIG Domain Protein; Response Regulator Receiver Protein; Hdod Domain Family Protein
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MATLEEYLSQIKDLTIVPPVLLSVLSLDDDNEISFGELEKKVQSDQVLVARLLKLANSPFFSRGNPVANMKQVITRLGFK TVRSMVAMSMTDSLFSQGNYKKFRDEVWDHSVAKGIFAQILCEEKKFKKEAELAITCGLMQDLGRIVLNTIDRKKYVEVL TEFQTSDVSLVSLEKKAFGVDSYEMGSAAAKLWKMPTIIITSIDDLSKPVAEQSSLGQIIGFAGVIAKLTGHGKQEPGTL EKLEEYKTSLGFEIEDVKSYLAAKDEKLKTNELYQFCSTL
Sequences:
>Translated_280_residues MATLEEYLSQIKDLTIVPPVLLSVLSLDDDNEISFGELEKKVQSDQVLVARLLKLANSPFFSRGNPVANMKQVITRLGFK TVRSMVAMSMTDSLFSQGNYKKFRDEVWDHSVAKGIFAQILCEEKKFKKEAELAITCGLMQDLGRIVLNTIDRKKYVEVL TEFQTSDVSLVSLEKKAFGVDSYEMGSAAAKLWKMPTIIITSIDDLSKPVAEQSSLGQIIGFAGVIAKLTGHGKQEPGTL EKLEEYKTSLGFEIEDVKSYLAAKDEKLKTNELYQFCSTL >Mature_279_residues ATLEEYLSQIKDLTIVPPVLLSVLSLDDDNEISFGELEKKVQSDQVLVARLLKLANSPFFSRGNPVANMKQVITRLGFKT VRSMVAMSMTDSLFSQGNYKKFRDEVWDHSVAKGIFAQILCEEKKFKKEAELAITCGLMQDLGRIVLNTIDRKKYVEVLT EFQTSDVSLVSLEKKAFGVDSYEMGSAAAKLWKMPTIIITSIDDLSKPVAEQSSLGQIIGFAGVIAKLTGHGKQEPGTLE KLEEYKTSLGFEIEDVKSYLAAKDEKLKTNELYQFCSTL
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31228; Mature: 31097
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLEEYLSQIKDLTIVPPVLLSVLSLDDDNEISFGELEKKVQSDQVLVARLLKLANSPF CCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC FSRGNPVANMKQVITRLGFKTVRSMVAMSMTDSLFSQGNYKKFRDEVWDHSVAKGIFAQI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LCEEKKFKKEAELAITCGLMQDLGRIVLNTIDRKKYVEVLTEFQTSDVSLVSLEKKAFGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHCC DSYEMGSAAAKLWKMPTIIITSIDDLSKPVAEQSSLGQIIGFAGVIAKLTGHGKQEPGTL CCHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH EKLEEYKTSLGFEIEDVKSYLAAKDEKLKTNELYQFCSTL HHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure ATLEEYLSQIKDLTIVPPVLLSVLSLDDDNEISFGELEKKVQSDQVLVARLLKLANSPF CCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC FSRGNPVANMKQVITRLGFKTVRSMVAMSMTDSLFSQGNYKKFRDEVWDHSVAKGIFAQI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LCEEKKFKKEAELAITCGLMQDLGRIVLNTIDRKKYVEVLTEFQTSDVSLVSLEKKAFGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHCC DSYEMGSAAAKLWKMPTIIITSIDDLSKPVAEQSSLGQIIGFAGVIAKLTGHGKQEPGTL CCHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH EKLEEYKTSLGFEIEDVKSYLAAKDEKLKTNELYQFCSTL HHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA