| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221456
Identifier: 183221456
GI number: 183221456
Start: 2163767
End: 2165194
Strand: Reverse
Name: 183221456
Synonym: LEPBI_I2074
Alternate gene names: NA
Gene position: 2165194-2163767 (Counterclockwise)
Preceding gene: 183221457
Following gene: 183221455
Centisome position: 60.15
GC content: 38.52
Gene sequence:
>1428_bases TTGAATTTCCTTCGCTCCATCACTCCAATTGTTTTTGGGTTTTTGTTTTTTTTACCTATGAGTTCGGTTGATTCTTTGGG ATGGGAGGTTGGGATTTTAGGTTACGAATTATTTTTAAAAGAAAACCAAAACCAAAAACAATTGGTCGTCCCAGGTTGGG ACTTTCATACACGAAACTGGGGAAAGGTATTTCAATCAGAGGCCTACCTTCACAGAGTCTCCAGCGAATCTTTGTTTGTC GGTTTGAAAGATAAAAACAGAAAGAACCAAATCCATTGGGATTTGGATATAAAACTGACTTCTGGTCCCGAGACAGGACT CAGAAATTATTATTTAGGGAAAAATCATTTTTTAGGTTACGAGACCAAAGTATTTTTTTTAGGAGTGGGGCGAAGGGAAC ATTTATTTTCCCCTAAAAGTTTCAGCTCTTTTTTTGATGGTGGGGAAGGCCTCTTTCTCGAATTAAAACCAGAGAAATCC TTCCTTGTCCAATTTTTCCTTTGGGACCATTATTCGGGATCCCTTTTATTCTCCAAAGATCAATTCCGGCATTTACTTTA TGTATCAGATGAATATGAAACCAATTCAAAAACTCAAGTTACAAGCTTTAGTCGAAACCATCACCGAAGGCAAAGTTTTG GATTGATTTACGGTGACTTTTTGACACTTCGAATTGGGTTTCATTATTTGGAGCTCGGAAGTTTTGGTCCAAATACAAAA GACCATCCCCCAGAAACTAAAAAAAGTTTTGCAGATGGAGACTCGTTATTCTCCGGAAATTTTGGTTTTGGTGCCCATTT CGAACACTTCTCGTTTGAATTTGATTTTTTATGGTCGAAAGGCAATGATAGAACACGATCAAAACTAGCGGCTCACTCTG GATCTATCCCCATCGCTGGTGAAGCCATTCAGTTAGGAACCGAACTTCGATTTGGTGGTTTTAAATTTAGAAGTTCCCAT TTTTTATCGGATCGAGCAGAAACAAATGAAAAACACCAGATCGTAAAGGAAGGTTACATTTCGTTTGGCACTCATCCTAG TCAAACGCCTTACTTATCTCAAATCTTTCGTGTATTTCCTTCCGCGGCAGTGACTGAAAAAGGTTATGAAAAGAACTTTG CCATCATCGAAGGACGTTCCTTTGGTTATTTGACTGAGCTTGTGATCAGTTTTGAATTCCCTCCATTGGTAGTGAAATGC ATAGGAAACTATTTTGTCCCATATAAACAAAACGTTCCGAGTGACGGAAGGATCAGTGTCAATCGACGAGAATTCGAAAG GTTTTTCCTAGCAGAAGGAATGATGGAAGTTTCTCTGAAAGAGGAAGCGGGACTTGAGTTAGGTGTAGGAATCTCTCAAT TATTTTTACCAGAAACATTCAATCTCACCTCCAATTTTGGATATGTATATGGAAGGTTACAAATTTGA
Upstream 100 bases:
>100_bases CACCGTTTCGAAAGTATGTGAATTCAGGTGAATACCTCTGGTTAAAAAAAAACAGTGACGGGACCAAGTCAAAAGATTTT GAAATCTATCGTGAGGAAAA
Downstream 100 bases:
>100_bases ACTCTAAGACAAAGATTCAATTCCAACGTCTGGTTTGGATCATAATTGGCATCCATTTGATCCAATGCCGTACACATAAA TCCAATTACGATCTTTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MNFLRSITPIVFGFLFFLPMSSVDSLGWEVGILGYELFLKENQNQKQLVVPGWDFHTRNWGKVFQSEAYLHRVSSESLFV GLKDKNRKNQIHWDLDIKLTSGPETGLRNYYLGKNHFLGYETKVFFLGVGRREHLFSPKSFSSFFDGGEGLFLELKPEKS FLVQFFLWDHYSGSLLFSKDQFRHLLYVSDEYETNSKTQVTSFSRNHHRRQSFGLIYGDFLTLRIGFHYLELGSFGPNTK DHPPETKKSFADGDSLFSGNFGFGAHFEHFSFEFDFLWSKGNDRTRSKLAAHSGSIPIAGEAIQLGTELRFGGFKFRSSH FLSDRAETNEKHQIVKEGYISFGTHPSQTPYLSQIFRVFPSAAVTEKGYEKNFAIIEGRSFGYLTELVISFEFPPLVVKC IGNYFVPYKQNVPSDGRISVNRREFERFFLAEGMMEVSLKEEAGLELGVGISQLFLPETFNLTSNFGYVYGRLQI
Sequences:
>Translated_475_residues MNFLRSITPIVFGFLFFLPMSSVDSLGWEVGILGYELFLKENQNQKQLVVPGWDFHTRNWGKVFQSEAYLHRVSSESLFV GLKDKNRKNQIHWDLDIKLTSGPETGLRNYYLGKNHFLGYETKVFFLGVGRREHLFSPKSFSSFFDGGEGLFLELKPEKS FLVQFFLWDHYSGSLLFSKDQFRHLLYVSDEYETNSKTQVTSFSRNHHRRQSFGLIYGDFLTLRIGFHYLELGSFGPNTK DHPPETKKSFADGDSLFSGNFGFGAHFEHFSFEFDFLWSKGNDRTRSKLAAHSGSIPIAGEAIQLGTELRFGGFKFRSSH FLSDRAETNEKHQIVKEGYISFGTHPSQTPYLSQIFRVFPSAAVTEKGYEKNFAIIEGRSFGYLTELVISFEFPPLVVKC IGNYFVPYKQNVPSDGRISVNRREFERFFLAEGMMEVSLKEEAGLELGVGISQLFLPETFNLTSNFGYVYGRLQI >Mature_475_residues MNFLRSITPIVFGFLFFLPMSSVDSLGWEVGILGYELFLKENQNQKQLVVPGWDFHTRNWGKVFQSEAYLHRVSSESLFV GLKDKNRKNQIHWDLDIKLTSGPETGLRNYYLGKNHFLGYETKVFFLGVGRREHLFSPKSFSSFFDGGEGLFLELKPEKS FLVQFFLWDHYSGSLLFSKDQFRHLLYVSDEYETNSKTQVTSFSRNHHRRQSFGLIYGDFLTLRIGFHYLELGSFGPNTK DHPPETKKSFADGDSLFSGNFGFGAHFEHFSFEFDFLWSKGNDRTRSKLAAHSGSIPIAGEAIQLGTELRFGGFKFRSSH FLSDRAETNEKHQIVKEGYISFGTHPSQTPYLSQIFRVFPSAAVTEKGYEKNFAIIEGRSFGYLTELVISFEFPPLVVKC IGNYFVPYKQNVPSDGRISVNRREFERFFLAEGMMEVSLKEEAGLELGVGISQLFLPETFNLTSNFGYVYGRLQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54576; Mature: 54576
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFLRSITPIVFGFLFFLPMSSVDSLGWEVGILGYELFLKENQNQKQLVVPGWDFHTRNW CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCEEEECCCCCCCCCH GKVFQSEAYLHRVSSESLFVGLKDKNRKNQIHWDLDIKLTSGPETGLRNYYLGKNHFLGY HHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEECCCCCCCCE ETKVFFLGVGRREHLFSPKSFSSFFDGGEGLFLELKPEKSFLVQFFLWDHYSGSLLFSKD EEEEEEEECCCHHHCCCCCHHHHHHCCCCEEEEEECCCHHHEEEEEEEECCCCCEEEEHH QFRHLLYVSDEYETNSKTQVTSFSRNHHRRQSFGLIYGDFLTLRIGFHYLELGSFGPNTK HCCEEEEEECCCCCCCCEEEEECHHHHHHHHHCCEEECCEEEEEECEEEEEECCCCCCCC DHPPETKKSFADGDSLFSGNFGFGAHFEHFSFEFDFLWSKGNDRTRSKLAAHSGSIPIAG CCCCHHHHHHCCCCCEEECCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHCCCCCCCCC EAIQLGTELRFGGFKFRSSHFLSDRAETNEKHQIVKEGYISFGTHPSQTPYLSQIFRVFP CCEEECCEEEECCEEECCCCCCCCHHCCCHHHHHHHHCCEECCCCCCCCHHHHHHHHHCC SAAVTEKGYEKNFAIIEGRSFGYLTELVISFEFPPLVVKCIGNYFVPYKQNVPSDGRISV CHHHHCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEE NRREFERFFLAEGMMEVSLKEEAGLELGVGISQLFLPETFNLTSNFGYVYGRLQI CHHHHHHHHHHCCHHEEEEHHHCCCEECCCHHHHHCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MNFLRSITPIVFGFLFFLPMSSVDSLGWEVGILGYELFLKENQNQKQLVVPGWDFHTRNW CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCEEEECCCCCCCCCH GKVFQSEAYLHRVSSESLFVGLKDKNRKNQIHWDLDIKLTSGPETGLRNYYLGKNHFLGY HHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEECCCCCCCCE ETKVFFLGVGRREHLFSPKSFSSFFDGGEGLFLELKPEKSFLVQFFLWDHYSGSLLFSKD EEEEEEEECCCHHHCCCCCHHHHHHCCCCEEEEEECCCHHHEEEEEEEECCCCCEEEEHH QFRHLLYVSDEYETNSKTQVTSFSRNHHRRQSFGLIYGDFLTLRIGFHYLELGSFGPNTK HCCEEEEEECCCCCCCCEEEEECHHHHHHHHHCCEEECCEEEEEECEEEEEECCCCCCCC DHPPETKKSFADGDSLFSGNFGFGAHFEHFSFEFDFLWSKGNDRTRSKLAAHSGSIPIAG CCCCHHHHHHCCCCCEEECCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHCCCCCCCCC EAIQLGTELRFGGFKFRSSHFLSDRAETNEKHQIVKEGYISFGTHPSQTPYLSQIFRVFP CCEEECCEEEECCEEECCCCCCCCHHCCCHHHHHHHHCCEECCCCCCCCHHHHHHHHHCC SAAVTEKGYEKNFAIIEGRSFGYLTELVISFEFPPLVVKCIGNYFVPYKQNVPSDGRISV CHHHHCCCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEE NRREFERFFLAEGMMEVSLKEEAGLELGVGISQLFLPETFNLTSNFGYVYGRLQI CHHHHHHHHHHCCHHEEEEHHHCCCEECCCHHHHHCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA