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The map label for this gene is yfbE [C]

Identifier: 183221406

GI number: 183221406

Start: 2106100

End: 2107374

Strand: Reverse

Name: yfbE [C]

Synonym: LEPBI_I2024

Alternate gene names: 183221406

Gene position: 2107374-2106100 (Counterclockwise)

Preceding gene: 183221407

Following gene: 183221405

Centisome position: 58.54

GC content: 35.61

Gene sequence:

>1275_bases
ATGGAAAAGTTAGCTTACTTAGGTGGCAAAAAAACTATTAATAAAGAATTAAAACCATATATTTCCTTTGGAAAAGAGGA
AATTGATTCGGTTCAATCTGTTTTGCAATCTGGTGAATTGTCTCGATTCTATGGTTCTTGGCATGAAGACTTTTTCGGTG
GTAAGAAAGTAAAGGAATTTGAATCCAACTGGTCCAAAGAATTTGGAATAGAGTATTCAGTAAGTGTAAATTCAGCAACA
TCCGGTTTAATAGCCGCCTTAGGAGCCGTTGGTGTAGAACCTTTTGACGAGGTTTTAGTAAGTCCTTGGACTATGTGTGC
TTCTGCCACTGCTATTTTAGTTTGGAATGCAATACCAGTGTTTGTTGATATCAATCCTGATAATTTTAATATTGATCCAA
CAAAAATTAGGTCATTGATCACAAAAAAAACGAAAGCAATTGTTGTACCTGATATTTTTGGTCAATCGGCTCAGCTTACT
GAAATTTTGAAAATAGCGAAAGAATTCGGTTTAAAAGTAATTGAAGATGCCTCACAAGCTCCGGGAGCAATGTATAAGGG
AAAAAAAGTAGGTACAAACGCAGATATTGGTGTGTTTAGTTTGAATTACCATAAACATATCCATACTGGAGAAGGCGGAG
TTTGTGTTACTGCAGATGCAAAAATTGCAGAAAGACTGCAATTGATACGAAATCATGCGGAGGCAGTAGTCGGTCCCAAA
GGTGAAATTGATATCTCGAATATGATTGGTTTTAATTTTAGATTGGGAGAAATTGAGTCAGCAATTGGAATTGAACAACT
AAAAAAACTACCTTCAATTGCTGAACAGCGGATTCGTGCTGGTGCACTTTTAAACGAGGGTTTGAAAGATTTAAAAGGAT
TAAAACTTCCAGTGCCATTAGAAGGATGTACGCACGTTTATTATATGTATGGTTTGATTGTTGATTTTGATTCGTTAGGT
GTTACTCGAGAGAAGTTAATTGAGGTTTTAACTGCAGAGGGAATCCCTAGTTTAAGGCCGAGTTATTTAAATATTCATCT
ACTTCCCATGTACCAAAAAAGAATTGCTTATGGTAAATCGGGTTTTCCATGGATTTCTCCTGGTGAGACAAGTAAAGTTA
CTTATGAAAAAGGAATCTGCCCTATTGCCGAGAACCTCCAAGATAAGAGTTACATTGGTTTTTATTTTGGCGGTTTTGCT
CTGGACGATGAAGAAATAAACTTATTAATTGCAGCCTTTCGTAAAGTTTGGAATCAATTAAATTTAATTAAATGA

Upstream 100 bases:

>100_bases
TGAAATTGATTGTGAATCAGACGGTAGTTCTGCGTTAAATACTCAGTTAGTAGTAGATCAAATTTTCTCTCAATGTTCGA
ATATGGAAGGAATGAATTAA

Downstream 100 bases:

>100_bases
AAAAATTTTCTTTGTTACCAAATCTCAGTGGCAAAGGGGTGTTCGTATTTAGTGATCCAGGTGGAGCTAAGCCAGTTTTA
GCATTTTTGAAGTTAAATCA

Product: putative aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MEKLAYLGGKKTINKELKPYISFGKEEIDSVQSVLQSGELSRFYGSWHEDFFGGKKVKEFESNWSKEFGIEYSVSVNSAT
SGLIAALGAVGVEPFDEVLVSPWTMCASATAILVWNAIPVFVDINPDNFNIDPTKIRSLITKKTKAIVVPDIFGQSAQLT
EILKIAKEFGLKVIEDASQAPGAMYKGKKVGTNADIGVFSLNYHKHIHTGEGGVCVTADAKIAERLQLIRNHAEAVVGPK
GEIDISNMIGFNFRLGEIESAIGIEQLKKLPSIAEQRIRAGALLNEGLKDLKGLKLPVPLEGCTHVYYMYGLIVDFDSLG
VTREKLIEVLTAEGIPSLRPSYLNIHLLPMYQKRIAYGKSGFPWISPGETSKVTYEKGICPIAENLQDKSYIGFYFGGFA
LDDEEINLLIAAFRKVWNQLNLIK

Sequences:

>Translated_424_residues
MEKLAYLGGKKTINKELKPYISFGKEEIDSVQSVLQSGELSRFYGSWHEDFFGGKKVKEFESNWSKEFGIEYSVSVNSAT
SGLIAALGAVGVEPFDEVLVSPWTMCASATAILVWNAIPVFVDINPDNFNIDPTKIRSLITKKTKAIVVPDIFGQSAQLT
EILKIAKEFGLKVIEDASQAPGAMYKGKKVGTNADIGVFSLNYHKHIHTGEGGVCVTADAKIAERLQLIRNHAEAVVGPK
GEIDISNMIGFNFRLGEIESAIGIEQLKKLPSIAEQRIRAGALLNEGLKDLKGLKLPVPLEGCTHVYYMYGLIVDFDSLG
VTREKLIEVLTAEGIPSLRPSYLNIHLLPMYQKRIAYGKSGFPWISPGETSKVTYEKGICPIAENLQDKSYIGFYFGGFA
LDDEEINLLIAAFRKVWNQLNLIK
>Mature_424_residues
MEKLAYLGGKKTINKELKPYISFGKEEIDSVQSVLQSGELSRFYGSWHEDFFGGKKVKEFESNWSKEFGIEYSVSVNSAT
SGLIAALGAVGVEPFDEVLVSPWTMCASATAILVWNAIPVFVDINPDNFNIDPTKIRSLITKKTKAIVVPDIFGQSAQLT
EILKIAKEFGLKVIEDASQAPGAMYKGKKVGTNADIGVFSLNYHKHIHTGEGGVCVTADAKIAERLQLIRNHAEAVVGPK
GEIDISNMIGFNFRLGEIESAIGIEQLKKLPSIAEQRIRAGALLNEGLKDLKGLKLPVPLEGCTHVYYMYGLIVDFDSLG
VTREKLIEVLTAEGIPSLRPSYLNIHLLPMYQKRIAYGKSGFPWISPGETSKVTYEKGICPIAENLQDKSYIGFYFGGFA
LDDEEINLLIAAFRKVWNQLNLIK

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=354, Percent_Identity=27.9661016949153, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI2367285, Length=340, Percent_Identity=29.4117647058824, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 46761; Mature: 46761

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLAYLGGKKTINKELKPYISFGKEEIDSVQSVLQSGELSRFYGSWHEDFFGGKKVKEF
CCCCHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCHHHHHCCCCHHHHH
ESNWSKEFGIEYSVSVNSATSGLIAALGAVGVEPFDEVLVSPWTMCASATAILVWNAIPV
HHCCCHHCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHEEEEEECEEE
FVDINPDNFNIDPTKIRSLITKKTKAIVVPDIFGQSAQLTEILKIAKEFGLKVIEDASQA
EEEECCCCCCCCHHHHHHHHHHCCCEEEECHHCCCCHHHHHHHHHHHHHCCCEEHHCCCC
PGAMYKGKKVGTNADIGVFSLNYHKHIHTGEGGVCVTADAKIAERLQLIRNHAEAVVGPK
CCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCC
GEIDISNMIGFNFRLGEIESAIGIEQLKKLPSIAEQRIRAGALLNEGLKDLKGLKLPVPL
CCEEHHHHCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EGCTHVYYMYGLIVDFDSLGVTREKLIEVLTAEGIPSLRPSYLNIHLLPMYQKRIAYGKS
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHCCCC
GFPWISPGETSKVTYEKGICPIAENLQDKSYIGFYFGGFALDDEEINLLIAAFRKVWNQL
CCCCCCCCCCCEEEHHCCCCHHHHCCCCCCEEEEEECCEEECHHHHHHHHHHHHHHHHHC
NLIK
CCCC
>Mature Secondary Structure
MEKLAYLGGKKTINKELKPYISFGKEEIDSVQSVLQSGELSRFYGSWHEDFFGGKKVKEF
CCCCHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCHHHHHCCCCHHHHH
ESNWSKEFGIEYSVSVNSATSGLIAALGAVGVEPFDEVLVSPWTMCASATAILVWNAIPV
HHCCCHHCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHEEEEEECEEE
FVDINPDNFNIDPTKIRSLITKKTKAIVVPDIFGQSAQLTEILKIAKEFGLKVIEDASQA
EEEECCCCCCCCHHHHHHHHHHCCCEEEECHHCCCCHHHHHHHHHHHHHCCCEEHHCCCC
PGAMYKGKKVGTNADIGVFSLNYHKHIHTGEGGVCVTADAKIAERLQLIRNHAEAVVGPK
CCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCC
GEIDISNMIGFNFRLGEIESAIGIEQLKKLPSIAEQRIRAGALLNEGLKDLKGLKLPVPL
CCEEHHHHCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EGCTHVYYMYGLIVDFDSLGVTREKLIEVLTAEGIPSLRPSYLNIHLLPMYQKRIAYGKS
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHCCCC
GFPWISPGETSKVTYEKGICPIAENLQDKSYIGFYFGGFALDDEEINLLIAAFRKVWNQL
CCCCCCCCCCCEEEHHCCCCHHHHCCCCCCEEEEEECCEEECHHHHHHHHHHHHHHHHHC
NLIK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]