Click here to switch to the map view.

The map label for this gene is wcaE [H]

Identifier: 183221381

GI number: 183221381

Start: 2080750

End: 2081679

Strand: Reverse

Name: wcaE [H]

Synonym: LEPBI_I1999

Alternate gene names: 183221381

Gene position: 2081679-2080750 (Counterclockwise)

Preceding gene: 183221382

Following gene: 183221380

Centisome position: 57.83

GC content: 33.33

Gene sequence:

>930_bases
ATGCAAAATAAGAAACCTTTAGTATCCATCATAACAGTTGTTCGCAATGCTGAAGACACAATTGTTCGAACGATCCGTTC
CGCCTTAATCCAAAAAAATGTTAACTTTGAAGTATTGGTATGGGATGGTTTGAGTTCTGACCACACAGTCGATAAAATTA
AAACTTTCGGAGATCAAATTCGGTTCTTTTCAGGAAAGGATACGGGCGTATACGATGCCATGAATCGAGCTTTGCCGTTA
GCCAATGGAAAATGGATTTTGTTTTTAAATGCCGATGATTATTTTTTACACCCACTTGCACTTGAAAAATTAGTTTTATC
CACATTGGATTCAAAAGTAGATTATGTATGTGGCGAGGCCAAAATGTTTTTTGGATTGAAGCGTTGGAAACCAAAAACCC
TTACAGATTTTGATTTTTTGATTGGGAATCCTTCCAATCACCAAGCGTATTTGTGTAAAAAAGAAATTTATACCAAGTTA
AAAGGATTTAACACGGATTATAGATATTCTGCTGATGTAGATTTTATGTTTCGCGTGATTCAGAAAGGTTACATTGGGAA
AAAAATCCAAGATTCAATTGTGCATTACTCCTTAGGTGGCTTGTCTACTAAAAATGTTGGAAAAGGAGTCTCTGAATTAG
AGTCCATCATGGCTCATTTTCTACATTCTGATTTGGAATTTGCACGTGAAGCTAGATTAGTTTTCCATGAAGGGAAATTA
CCAAGAGAAACGTTTTTAGAAAAATTAATTTCTATGAAACTTTCAGATTCTCAATGGAAGATGATAATACTTTTTTTAGG
AAAAAAAGTAAGTTATGAATCTACCTCTGGTCTGATGAAGATATTTTATTATTATAAATCGATTGGAATCAAAATGTTCA
AAAGGATTGTGTTTTTGATTCTAAGTTTATTACCAAAACGGGTTTTATGA

Upstream 100 bases:

>100_bases
GAGAAACTGATCGAAAATGGGTTCAATCGAGTGAAGCATTTTTCCTGGGATCAATGTGCCGATGAACATATACAGTTGTA
TGAATCCTTAACACAATCAA

Downstream 100 bases:

>100_bases
AAAAAGTATTAATAGTCGGAGCAGGTTTTTCTGGTGCTGTCGTAGCAAATACACTCGCAAAAACAGGAAAATATCAAATC
GAAGTTGTGGATGAAAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MQNKKPLVSIITVVRNAEDTIVRTIRSALIQKNVNFEVLVWDGLSSDHTVDKIKTFGDQIRFFSGKDTGVYDAMNRALPL
ANGKWILFLNADDYFLHPLALEKLVLSTLDSKVDYVCGEAKMFFGLKRWKPKTLTDFDFLIGNPSNHQAYLCKKEIYTKL
KGFNTDYRYSADVDFMFRVIQKGYIGKKIQDSIVHYSLGGLSTKNVGKGVSELESIMAHFLHSDLEFAREARLVFHEGKL
PRETFLEKLISMKLSDSQWKMIILFLGKKVSYESTSGLMKIFYYYKSIGIKMFKRIVFLILSLLPKRVL

Sequences:

>Translated_309_residues
MQNKKPLVSIITVVRNAEDTIVRTIRSALIQKNVNFEVLVWDGLSSDHTVDKIKTFGDQIRFFSGKDTGVYDAMNRALPL
ANGKWILFLNADDYFLHPLALEKLVLSTLDSKVDYVCGEAKMFFGLKRWKPKTLTDFDFLIGNPSNHQAYLCKKEIYTKL
KGFNTDYRYSADVDFMFRVIQKGYIGKKIQDSIVHYSLGGLSTKNVGKGVSELESIMAHFLHSDLEFAREARLVFHEGKL
PRETFLEKLISMKLSDSQWKMIILFLGKKVSYESTSGLMKIFYYYKSIGIKMFKRIVFLILSLLPKRVL
>Mature_309_residues
MQNKKPLVSIITVVRNAEDTIVRTIRSALIQKNVNFEVLVWDGLSSDHTVDKIKTFGDQIRFFSGKDTGVYDAMNRALPL
ANGKWILFLNADDYFLHPLALEKLVLSTLDSKVDYVCGEAKMFFGLKRWKPKTLTDFDFLIGNPSNHQAYLCKKEIYTKL
KGFNTDYRYSADVDFMFRVIQKGYIGKKIQDSIVHYSLGGLSTKNVGKGVSELESIMAHFLHSDLEFAREARLVFHEGKL
PRETFLEKLISMKLSDSQWKMIILFLGKKVSYESTSGLMKIFYYYKSIGIKMFKRIVFLILSLLPKRVL

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788368, Length=225, Percent_Identity=30.2222222222222, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 35577; Mature: 35577

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNKKPLVSIITVVRNAEDTIVRTIRSALIQKNVNFEVLVWDGLSSDHTVDKIKTFGDQI
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHE
RFFSGKDTGVYDAMNRALPLANGKWILFLNADDYFLHPLALEKLVLSTLDSKVDYVCGEA
EEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCH
KMFFGLKRWKPKTLTDFDFLIGNPSNHQAYLCKKEIYTKLKGFNTDYRYSADVDFMFRVI
HHHHHHHHCCCCCCCCCHHEECCCCCCCEEEHHHHHHHHHHCCCCCCEECCCHHHHHHHH
QKGYIGKKIQDSIVHYSLGGLSTKNVGKGVSELESIMAHFLHSDLEFAREARLVFHEGKL
HHCCCCCHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
PRETFLEKLISMKLSDSQWKMIILFLGKKVSYESTSGLMKIFYYYKSIGIKMFKRIVFLI
CHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLLPKRVL
HHHHHHHCC
>Mature Secondary Structure
MQNKKPLVSIITVVRNAEDTIVRTIRSALIQKNVNFEVLVWDGLSSDHTVDKIKTFGDQI
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHE
RFFSGKDTGVYDAMNRALPLANGKWILFLNADDYFLHPLALEKLVLSTLDSKVDYVCGEA
EEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCH
KMFFGLKRWKPKTLTDFDFLIGNPSNHQAYLCKKEIYTKLKGFNTDYRYSADVDFMFRVI
HHHHHHHHCCCCCCCCCHHEECCCCCCCEEEHHHHHHHHHHCCCCCCEECCCHHHHHHHH
QKGYIGKKIQDSIVHYSLGGLSTKNVGKGVSELESIMAHFLHSDLEFAREARLVFHEGKL
HHCCCCCHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
PRETFLEKLISMKLSDSQWKMIILFLGKKVSYESTSGLMKIFYYYKSIGIKMFKRIVFLI
CHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLLPKRVL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759852; 9278503 [H]