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The map label for this gene is ybfF [C]

Identifier: 183221378

GI number: 183221378

Start: 2077945

End: 2078655

Strand: Reverse

Name: ybfF [C]

Synonym: LEPBI_I1996

Alternate gene names: 183221378

Gene position: 2078655-2077945 (Counterclockwise)

Preceding gene: 183221379

Following gene: 183221377

Centisome position: 57.75

GC content: 37.13

Gene sequence:

>711_bases
TTGGAGGAGTTTCTTCAAAAGATTGATTCTCTAACATTACCCACCTCCAAAGAACTGGTTTTTATCGATGATGCTTCGAG
AGACCAATCTCTTATAATCCTTCAGAATTTCAAATTTCGATCTGAATTCAAAATCCTGGCACAGGAAAAGAACCAAGGTA
AGGGCGCTGCCCTGCACCGTGGGATTGACGAGGCCACCGGTGACATTCTCATCATTCAGGATGCTGATTTCGAATATGAC
ATGGAAGAAATTCCAGTGCTCATTGAACCCATTGCGAAGGAAAAAGCGGATGTAGTATTCGGGTCCCGATTTAAGAAAGA
TGGAAGACAAGTGCATCGAACCTTTCATTATCTAATCAATCGGATTCTAACCATACTATCTAATTTTTTAAGTGGTCTAT
ACTTAACAGATATGGAAACATGTTATAAAGTTTTCCGTGCCGATATTCTTAAAAATATAATTTTAGAATCGAAACGATTT
GGATTCGAACCTGAAATCACAGCTAAAGTGGCAAGGCTCAAGATTCGTGTACAAGAATTTCCTATTTCTTACTATCCGAG
AAATTATTTAGAAGGAAAAAAAATAACTTGGAAGGATGGGATTGCAGCAATTCGGCATATTATCCATTTCAACATCTTTG
CAAATAAGAGAGATTTTTTCAAAAAAACTCTTCCAGAAAAGTACATTCCGAAGACAGCCAATTGGTTATAA

Upstream 100 bases:

>100_bases
TTCTTAGATATTAGTTATGGTCGCCAGACGGAATCTCGGTAGTTCAAAAAAAACAGTCAAAACCTCTCTCATCATTCCTG
TTTACAACGAATCAGCTCAT

Downstream 100 bases:

>100_bases
ACCAATGAAAAGGTTTTTCCCTTTTTTAATTGATGCGTTTCTATTGTTTGGAATTTCTTTTTTATTCCAATCTTATACGA
ATCAAAAAAATTTCCGGATT

Product: putative glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Family 2 Glycosyl Transferase; Dolichol-Phosphate Mannosyltransferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyl Transferase Family 2 Protein; Dolichol-P-Glucose Synthetase; Glycosyl Transferase Group 2 Family Protein; Dolichyl-Phosphate Mannose Synthase Related Protein; Dolichol-Phosphate Mannose Synthase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyltransferase Transmembrane Protein; Glycosyltransferase Group 2 Family Protein; Glycosyltransferases; Glycosyl Transferase GT2 Family; Polyprenyl-Phosphate Beta-D-Mannosyltransferase; Glycosyltransferase Protein; Sugar Transferase; Histidinol-Phosphate Phosphatase Family Protein; Family Glycosyltransferase; Fused Dolichol-Phosphate Mannosyltransferase/ Protein; Family 2 Glycosyl Transferase Protein; Dolichyl-Phosphate Beta-Glucosyltransferase; Ypothetical Protein SMU.; B-Glycosyltransferase; Group 2 Family Glycosyl Transferase; B-Glycosyltransferase Glycosyltransferase Family 2 Protein; Dolichyl-Phosphate Hexose Synthase; Glycosyl Transferase Group 2 Family; Undecaprenol Glycosyltransferase; Dolichyl-Phosphate Mannose Synthase-Like Protein; Dolichol Monophosphate Mannose Synthase

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MEEFLQKIDSLTLPTSKELVFIDDASRDQSLIILQNFKFRSEFKILAQEKNQGKGAALHRGIDEATGDILIIQDADFEYD
MEEIPVLIEPIAKEKADVVFGSRFKKDGRQVHRTFHYLINRILTILSNFLSGLYLTDMETCYKVFRADILKNIILESKRF
GFEPEITAKVARLKIRVQEFPISYYPRNYLEGKKITWKDGIAAIRHIIHFNIFANKRDFFKKTLPEKYIPKTANWL

Sequences:

>Translated_236_residues
MEEFLQKIDSLTLPTSKELVFIDDASRDQSLIILQNFKFRSEFKILAQEKNQGKGAALHRGIDEATGDILIIQDADFEYD
MEEIPVLIEPIAKEKADVVFGSRFKKDGRQVHRTFHYLINRILTILSNFLSGLYLTDMETCYKVFRADILKNIILESKRF
GFEPEITAKVARLKIRVQEFPISYYPRNYLEGKKITWKDGIAAIRHIIHFNIFANKRDFFKKTLPEKYIPKTANWL
>Mature_236_residues
MEEFLQKIDSLTLPTSKELVFIDDASRDQSLIILQNFKFRSEFKILAQEKNQGKGAALHRGIDEATGDILIIQDADFEYD
MEEIPVLIEPIAKEKADVVFGSRFKKDGRQVHRTFHYLINRILTILSNFLSGLYLTDMETCYKVFRADILKNIILESKRF
GFEPEITAKVARLKIRVQEFPISYYPRNYLEGKKITWKDGIAAIRHIIHFNIFANKRDFFKKTLPEKYIPKTANWL

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=186, Percent_Identity=29.5698924731183, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71999402, Length=185, Percent_Identity=29.7297297297297, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24585265, Length=178, Percent_Identity=29.2134831460674, Blast_Score=71, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27612; Mature: 27612

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEFLQKIDSLTLPTSKELVFIDDASRDQSLIILQNFKFRSEFKILAQEKNQGKGAALHR
CHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHC
GIDEATGDILIIQDADFEYDMEEIPVLIEPIAKEKADVVFGSRFKKDGRQVHRTFHYLIN
CHHHCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RILTILSNFLSGLYLTDMETCYKVFRADILKNIILESKRFGFEPEITAKVARLKIRVQEF
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEHHHC
PISYYPRNYLEGKKITWKDGIAAIRHIIHFNIFANKRDFFKKTLPEKYIPKTANWL
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHCCCCCCCC
>Mature Secondary Structure
MEEFLQKIDSLTLPTSKELVFIDDASRDQSLIILQNFKFRSEFKILAQEKNQGKGAALHR
CHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHC
GIDEATGDILIIQDADFEYDMEEIPVLIEPIAKEKADVVFGSRFKKDGRQVHRTFHYLIN
CHHHCCCCEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RILTILSNFLSGLYLTDMETCYKVFRADILKNIILESKRFGFEPEITAKVARLKIRVQEF
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEHHHC
PISYYPRNYLEGKKITWKDGIAAIRHIIHFNIFANKRDFFKKTLPEKYIPKTANWL
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA