| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221219
Identifier: 183221219
GI number: 183221219
Start: 1922118
End: 1922810
Strand: Direct
Name: 183221219
Synonym: LEPBI_I1833
Alternate gene names: NA
Gene position: 1922118-1922810 (Clockwise)
Preceding gene: 183221216
Following gene: 183221220
Centisome position: 53.4
GC content: 40.26
Gene sequence:
>693_bases ATGTCGGCACGAGTTCCATTTTTGAAAACGAATCTTTTTCTTCTCTTATTTTTTTCACAGTGTGTCCTGTTTGAACCCAA AATCAGTAAGGTGCCCGATGCCTATGTGCGGGAAGAGGTCATGAATTCGGAGCAAAAAAATGCAACGAAGATTCTCACAG ATAAAATCATCAAATTAAATAACGAAGTCACAAACCAGCGAAAGGCAAATGCTCTCACATCCCAAGCCATCAAAATTTCT CAATCGAAAGTAACTAAACATGCCGCAGAAAGAGATTTAAAACGTGCCAAAGAATCTTACTTCACTCTCAAAGAAGATCA GGTTTCTGCCAAACGATACTTAGAAGAAAGCCAAGCAGTTGAATTAGAAAGAGCAAAAGAAGAAACCAGATACAAAACTT GGGTGCAAAAAGAAAAAGAAGACAAAGCATACTTAGAAATGAAGGAAGCGGCTCTCGGGGAACTCATCGCAGAACTCGAG TTAGTTCGGTCTGAAATTGCGGTGAAATTCCAAGAATCCCAAGGGAAAACACCCGCTGACCCAGAATACATCAAAAAAGA AATTTATGAAACCCAATATGCGGAAAAAAAATCAGATGCCCGCAGGCGGCTGTCCGATTGGGAACGAATCAAAACAGAAG CTCCCAGTCTCCCGAAAGTGAATTTAGAGGATAGTTTTGATGACTCCAAATAA
Upstream 100 bases:
>100_bases CGGAATTCTGACTCTTTCTTTCTTTCTTCTTCCATAAATCAGCGGATTTCCTGAATTTTCCAATTGACGGTTATGTCACG TGAACCATAGGCTATATCCT
Downstream 100 bases:
>100_bases AAAACTAAGTTTTGTTTTCCTTTCCATTGGTTTCCTATTCCTTGGAATTTTCAATCCTTCAGAACTGCAAGCGGATTGGG TTTACTTTCCCTATGAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSARVPFLKTNLFLLLFFSQCVLFEPKISKVPDAYVREEVMNSEQKNATKILTDKIIKLNNEVTNQRKANALTSQAIKIS QSKVTKHAAERDLKRAKESYFTLKEDQVSAKRYLEESQAVELERAKEETRYKTWVQKEKEDKAYLEMKEAALGELIAELE LVRSEIAVKFQESQGKTPADPEYIKKEIYETQYAEKKSDARRRLSDWERIKTEAPSLPKVNLEDSFDDSK
Sequences:
>Translated_230_residues MSARVPFLKTNLFLLLFFSQCVLFEPKISKVPDAYVREEVMNSEQKNATKILTDKIIKLNNEVTNQRKANALTSQAIKIS QSKVTKHAAERDLKRAKESYFTLKEDQVSAKRYLEESQAVELERAKEETRYKTWVQKEKEDKAYLEMKEAALGELIAELE LVRSEIAVKFQESQGKTPADPEYIKKEIYETQYAEKKSDARRRLSDWERIKTEAPSLPKVNLEDSFDDSK >Mature_229_residues SARVPFLKTNLFLLLFFSQCVLFEPKISKVPDAYVREEVMNSEQKNATKILTDKIIKLNNEVTNQRKANALTSQAIKISQ SKVTKHAAERDLKRAKESYFTLKEDQVSAKRYLEESQAVELERAKEETRYKTWVQKEKEDKAYLEMKEAALGELIAELEL VRSEIAVKFQESQGKTPADPEYIKKEIYETQYAEKKSDARRRLSDWERIKTEAPSLPKVNLEDSFDDSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26735; Mature: 26603
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARVPFLKTNLFLLLFFSQCVLFEPKISKVPDAYVREEVMNSEQKNATKILTDKIIKLN CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH NEVTNQRKANALTSQAIKISQSKVTKHAAERDLKRAKESYFTLKEDQVSAKRYLEESQAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ELERAKEETRYKTWVQKEKEDKAYLEMKEAALGELIAELELVRSEIAVKFQESQGKTPAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PEYIKKEIYETQYAEKKSDARRRLSDWERIKTEAPSLPKVNLEDSFDDSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SARVPFLKTNLFLLLFFSQCVLFEPKISKVPDAYVREEVMNSEQKNATKILTDKIIKLN CCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH NEVTNQRKANALTSQAIKISQSKVTKHAAERDLKRAKESYFTLKEDQVSAKRYLEESQAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ELERAKEETRYKTWVQKEKEDKAYLEMKEAALGELIAELELVRSEIAVKFQESQGKTPAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PEYIKKEIYETQYAEKKSDARRRLSDWERIKTEAPSLPKVNLEDSFDDSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA