| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is cah [H]
Identifier: 183221110
GI number: 183221110
Start: 1796194
End: 1797162
Strand: Direct
Name: cah [H]
Synonym: LEPBI_I1724
Alternate gene names: 183221110
Gene position: 1796194-1797162 (Clockwise)
Preceding gene: 183221109
Following gene: 183221111
Centisome position: 49.9
GC content: 37.56
Gene sequence:
>969_bases ATGTCGCAAATCGTTAGTTTTGACGAATGTTTTCAAACCGTTCCAAAATTGGATCCTCCAAGTGATTTAGATAGTTTTTG GAAATCTGGAATCGGTGAACTGAAAAAAGTTCCTATCAAAGCCACATATAAAACAGTGCTGAAGGGTTCCTTTATTTGGG AATCTCTAAATGATATCAGTTTTCAAAGTATCGACAATCATGTGTTACATGGTAAACTGGCGATTCCAAGAAAACGTGGA GATCGCCCAGTAGTTGTGTATTTTCATGATTATCTTGCCATCCCTGAGGAAATCCAAAAAGGATATTCTGATTTGGGTGT GGCGCAACTTCACATCACCTTACGTGGACATGGCGATGAAATGGTACAGATGCCGGTGGACCCAACAACTGGCAAATCCC CGATAGGATGGACACCGAATTATTTTGCTCATGGACTGGACCAAAAAGAAGAGTTTTATATGCGAAAACTTTATTTGGAT GTCATTAGGACCATTGAATTTTTAAGACTTTCGGATGGGATCGATGGAGACCAAATCATCCTTCATGGTAAGTCCATCGG ATCTGCATTGGCTGTTTTTGGTGCAGCATATTCTGATCGAATTAAAGGTTTAATCCTCGAGACACCTTCTTTTTGTTACA TTGATAAAGAACAAATGTCTTTAAAAGGAAATCCATGGGTAAGAGAACTCACGCCATTTTTTGAAAAAAGAGCAACGAAA AAAATCGATTATAAAAAAGAGTTAGCTTATTTTGATGCAATGAACTTTGCCAAAAAGATTAAAATCCCTGCCCTATTTTC ATGTGGTATGGAAGACCAAATTTCGCATCCCAAGTCTACCTTCGCATTATTCAATCATATGAATTGTGATAAACGAATGC AAATTTATCCAACGGAAGGAAATGAAGCAGGCAAAGAAAAACAACCACAAGCCAACCTTGAGTTTGTAAAAGAAATTTTT GGATTATGA
Upstream 100 bases:
>100_bases ACTCCAGTACCTGGTGGTGTGGGACCGATGACCATTTCTGTTTTACTCTTACAAACGATGTATAGTTTTTTAGGTCAATT TTCGCCTAAGTTGGAGTCTC
Downstream 100 bases:
>100_bases CAACAATTCCCTTCTTCTTTCAAAATACCAAGTCTGGAAAAAAAGAGCCCTTCCAACCAAAAGATCCAAATTCTGTTACG ATTTATTCATGTGGACCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyl xylan esterase [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSQIVSFDECFQTVPKLDPPSDLDSFWKSGIGELKKVPIKATYKTVLKGSFIWESLNDISFQSIDNHVLHGKLAIPRKRG DRPVVVYFHDYLAIPEEIQKGYSDLGVAQLHITLRGHGDEMVQMPVDPTTGKSPIGWTPNYFAHGLDQKEEFYMRKLYLD VIRTIEFLRLSDGIDGDQIILHGKSIGSALAVFGAAYSDRIKGLILETPSFCYIDKEQMSLKGNPWVRELTPFFEKRATK KIDYKKELAYFDAMNFAKKIKIPALFSCGMEDQISHPKSTFALFNHMNCDKRMQIYPTEGNEAGKEKQPQANLEFVKEIF GL
Sequences:
>Translated_322_residues MSQIVSFDECFQTVPKLDPPSDLDSFWKSGIGELKKVPIKATYKTVLKGSFIWESLNDISFQSIDNHVLHGKLAIPRKRG DRPVVVYFHDYLAIPEEIQKGYSDLGVAQLHITLRGHGDEMVQMPVDPTTGKSPIGWTPNYFAHGLDQKEEFYMRKLYLD VIRTIEFLRLSDGIDGDQIILHGKSIGSALAVFGAAYSDRIKGLILETPSFCYIDKEQMSLKGNPWVRELTPFFEKRATK KIDYKKELAYFDAMNFAKKIKIPALFSCGMEDQISHPKSTFALFNHMNCDKRMQIYPTEGNEAGKEKQPQANLEFVKEIF GL >Mature_321_residues SQIVSFDECFQTVPKLDPPSDLDSFWKSGIGELKKVPIKATYKTVLKGSFIWESLNDISFQSIDNHVLHGKLAIPRKRGD RPVVVYFHDYLAIPEEIQKGYSDLGVAQLHITLRGHGDEMVQMPVDPTTGKSPIGWTPNYFAHGLDQKEEFYMRKLYLDV IRTIEFLRLSDGIDGDQIILHGKSIGSALAVFGAAYSDRIKGLILETPSFCYIDKEQMSLKGNPWVRELTPFFEKRATKK IDYKKELAYFDAMNFAKKIKIPALFSCGMEDQISHPKSTFALFNHMNCDKRMQIYPTEGNEAGKEKQPQANLEFVKEIFG L
Specific function: Esterase that removed acetyl groups from a number of O- acetylated small substrates, such as acetylated xylose, short xylooligosaccharides and cephalosporin C. Has no activity towards polymeric acetylated xylan. Cannot cleave amide linkages [H]
COG id: COG3458
COG function: function code Q; Acetyl esterase (deacetylase)
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate esterase 7 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008391 [H]
Pfam domain/function: PF05448 AXE1 [H]
EC number: =3.1.1.41; =3.1.1.72 [H]
Molecular weight: Translated: 36672; Mature: 36540
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIVSFDECFQTVPKLDPPSDLDSFWKSGIGELKKVPIKATYKTVLKGSFIWESLNDIS CCCCCCHHHHHHHCCCCCCCHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC FQSIDNHVLHGKLAIPRKRGDRPVVVYFHDYLAIPEEIQKGYSDLGVAQLHITLRGHGDE HHHHCCCEEECEEECCCCCCCCCEEEEECCHHCCCHHHHCCHHHCCEEEEEEEEECCCCC MVQMPVDPTTGKSPIGWTPNYFAHGLDQKEEFYMRKLYLDVIRTIEFLRLSDGIDGDQII EEEECCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE LHGKSIGSALAVFGAAYSDRIKGLILETPSFCYIDKEQMSLKGNPWVRELTPFFEKRATK EECCHHHHHHHHHHHHHHHHHCEEEECCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHH KIDYKKELAYFDAMNFAKKIKIPALFSCGMEDQISHPKSTFALFNHMNCDKRMQIYPTEG CCCHHHHHHHHHHHHHHHHCCCCHHEECCCHHHHCCCHHHHHHHHCCCCCCCEEEEECCC NEAGKEKQPQANLEFVKEIFGL CCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SQIVSFDECFQTVPKLDPPSDLDSFWKSGIGELKKVPIKATYKTVLKGSFIWESLNDIS CCCCCHHHHHHHCCCCCCCHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC FQSIDNHVLHGKLAIPRKRGDRPVVVYFHDYLAIPEEIQKGYSDLGVAQLHITLRGHGDE HHHHCCCEEECEEECCCCCCCCCEEEEECCHHCCCHHHHCCHHHCCEEEEEEEEECCCCC MVQMPVDPTTGKSPIGWTPNYFAHGLDQKEEFYMRKLYLDVIRTIEFLRLSDGIDGDQII EEEECCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE LHGKSIGSALAVFGAAYSDRIKGLILETPSFCYIDKEQMSLKGNPWVRELTPFFEKRATK EECCHHHHHHHHHHHHHHHHHCEEEECCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHH KIDYKKELAYFDAMNFAKKIKIPALFSCGMEDQISHPKSTFALFNHMNCDKRMQIYPTEG CCCHHHHHHHHHHHHHHHHCCCCHHEECCCHHHHCCCHHHHHHHHCCCCCCCEEEEECCC NEAGKEKQPQANLEFVKEIFGL CCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]