| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221055
Identifier: 183221055
GI number: 183221055
Start: 1740161
End: 1741348
Strand: Direct
Name: 183221055
Synonym: LEPBI_I1668
Alternate gene names: NA
Gene position: 1740161-1741348 (Clockwise)
Preceding gene: 183221054
Following gene: 183221056
Centisome position: 48.34
GC content: 40.99
Gene sequence:
>1188_bases ATGCGGAAAATCTCCATACGTGACTTAGAGGCTGGTTCTAAGTTTACCAAGTCTCTTTACTTAGATAAGGACACTGTTTT TGTTGGAGCCGACCAACCCATCACACAACAAGATCTAGACCGTCTCGTCCAATTCGGGATCACATTCATCCTCACGGATG GAGAAAAAGTCACCGCCGACCAAAGTGACAAATCAGCAAACACCAATGGACCTGGATATTTTGATACCAATCTTCCTTTT TACCAGGATGATGAAAACTCGACTCGTTATAAATACCTTCTTGAAAAAACCAATACTGCGAAAGTAGAGTTCAATGCTGT TTTCAAAGATTGTTTTGATTTAGTGCAAAAAACATATAAGTCAGCATCGGAAGGGCGTTATACGGAGATTCGAGAGTTTC GTGAAATCGCGGAGCGGATCGCAGACCATACCAAAACAAACGCACAAATTCCGATTTTACTTTTATCCCATTCTCATTCT GGTTATTACCTCTACACTCATATTTGTTATGCGACTTTTTTTTCAGTGATGCTTGGAAACTTTTTGGAATTTTCCAGACC CAAACTCATTGATTTGGCACTCGCCTCCCTGTTTGCTGATATTGGAATGGTCACCGTTCCTGAAGAAGTCTCCGAAAAAA AAGGAAACCTGACAGAGTTAGATCTAAAAACCATCAAACGCCACCCTGTCACGGGTTACCAAATCCTCACCCAAAGGTTA AAATTAAAAAATTCCCTGGCGATTGTTGCCTTACAACACCATGAAGCCGTTGATGGATCTGGTTACCCACAACGAATCCT TGCCAACCAAATCGAAGAGCTCACCAAAGTATTTATGATTGCAGACCAATTTGCTGCGATGATCCATCCAAGGCCCTATC GACAAGCCATCCTTCCATACGAAGCAATGAAGATCATGATCAGCGAAAACGTGAACCGTTTTGATTTAAAAATGGTTCGG CTCTTTTTAAATAAACTTTCTATGTTTCCAGTGGGGTCCGGTGTTGTACTTTCTGACCTCAGAATGGGTATGGTGATCGA ATCCAATAAAGACAAACCTCTAAGGCCTGTGATCCGCGTGACAAAGGATGCCGAAGGAAAACGATTGAAACATTTAGAGT TTGTGGATCTTATGAAAGACCTAAATTTATACATCCAACAGGCCATTCCTTTTTCACAAATTTATTAA
Upstream 100 bases:
>100_bases TTGTATGAAGTCGTTGCTTCCGTCTTTCGTATCCTGGTTTTAGAGAGAGAAAAGAAAAACAATTGAAGTTTCTACGCTTC CTACTAGGATTTACGCAATT
Downstream 100 bases:
>100_bases CCAATTTTAGAATTGATATTCTAACGGTAGTTAATTTCTATTTGTTTCGGTTGGACTTTGGTTCCTAATTGAAAATTCAA GAATTCTCTAGGCCAAAGGA
Product: HD family metal-dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MRKISIRDLEAGSKFTKSLYLDKDTVFVGADQPITQQDLDRLVQFGITFILTDGEKVTADQSDKSANTNGPGYFDTNLPF YQDDENSTRYKYLLEKTNTAKVEFNAVFKDCFDLVQKTYKSASEGRYTEIREFREIAERIADHTKTNAQIPILLLSHSHS GYYLYTHICYATFFSVMLGNFLEFSRPKLIDLALASLFADIGMVTVPEEVSEKKGNLTELDLKTIKRHPVTGYQILTQRL KLKNSLAIVALQHHEAVDGSGYPQRILANQIEELTKVFMIADQFAAMIHPRPYRQAILPYEAMKIMISENVNRFDLKMVR LFLNKLSMFPVGSGVVLSDLRMGMVIESNKDKPLRPVIRVTKDAEGKRLKHLEFVDLMKDLNLYIQQAIPFSQIY
Sequences:
>Translated_395_residues MRKISIRDLEAGSKFTKSLYLDKDTVFVGADQPITQQDLDRLVQFGITFILTDGEKVTADQSDKSANTNGPGYFDTNLPF YQDDENSTRYKYLLEKTNTAKVEFNAVFKDCFDLVQKTYKSASEGRYTEIREFREIAERIADHTKTNAQIPILLLSHSHS GYYLYTHICYATFFSVMLGNFLEFSRPKLIDLALASLFADIGMVTVPEEVSEKKGNLTELDLKTIKRHPVTGYQILTQRL KLKNSLAIVALQHHEAVDGSGYPQRILANQIEELTKVFMIADQFAAMIHPRPYRQAILPYEAMKIMISENVNRFDLKMVR LFLNKLSMFPVGSGVVLSDLRMGMVIESNKDKPLRPVIRVTKDAEGKRLKHLEFVDLMKDLNLYIQQAIPFSQIY >Mature_395_residues MRKISIRDLEAGSKFTKSLYLDKDTVFVGADQPITQQDLDRLVQFGITFILTDGEKVTADQSDKSANTNGPGYFDTNLPF YQDDENSTRYKYLLEKTNTAKVEFNAVFKDCFDLVQKTYKSASEGRYTEIREFREIAERIADHTKTNAQIPILLLSHSHS GYYLYTHICYATFFSVMLGNFLEFSRPKLIDLALASLFADIGMVTVPEEVSEKKGNLTELDLKTIKRHPVTGYQILTQRL KLKNSLAIVALQHHEAVDGSGYPQRILANQIEELTKVFMIADQFAAMIHPRPYRQAILPYEAMKIMISENVNRFDLKMVR LFLNKLSMFPVGSGVVLSDLRMGMVIESNKDKPLRPVIRVTKDAEGKRLKHLEFVDLMKDLNLYIQQAIPFSQIY
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45212; Mature: 45212
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKISIRDLEAGSKFTKSLYLDKDTVFVGADQPITQQDLDRLVQFGITFILTDGEKVTAD CCCCCCCCCCCCCHHHHHHEECCCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCEEECC QSDKSANTNGPGYFDTNLPFYQDDENSTRYKYLLEKTNTAKVEFNAVFKDCFDLVQKTYK CCCCCCCCCCCCEECCCCCCEECCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHH SASEGRYTEIREFREIAERIADHTKTNAQIPILLLSHSHSGYYLYTHICYATFFSVMLGN CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHH FLEFSRPKLIDLALASLFADIGMVTVPEEVSEKKGNLTELDLKTIKRHPVTGYQILTQRL HHHHCCCHHHHHHHHHHHHHCCCEECCHHHHHCCCCCEEHHHHHHHCCCCHHHHHHHHHH KLKNSLAIVALQHHEAVDGSGYPQRILANQIEELTKVFMIADQFAAMIHPRPYRQAILPY HHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCH EAMKIMISENVNRFDLKMVRLFLNKLSMFPVGSGVVLSDLRMGMVIESNKDKPLRPVIRV HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEECCCCCCCCHHHHC TKDAEGKRLKHLEFVDLMKDLNLYIQQAIPFSQIY CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure MRKISIRDLEAGSKFTKSLYLDKDTVFVGADQPITQQDLDRLVQFGITFILTDGEKVTAD CCCCCCCCCCCCCHHHHHHEECCCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCEEECC QSDKSANTNGPGYFDTNLPFYQDDENSTRYKYLLEKTNTAKVEFNAVFKDCFDLVQKTYK CCCCCCCCCCCCEECCCCCCEECCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHH SASEGRYTEIREFREIAERIADHTKTNAQIPILLLSHSHSGYYLYTHICYATFFSVMLGN CCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHHHHH FLEFSRPKLIDLALASLFADIGMVTVPEEVSEKKGNLTELDLKTIKRHPVTGYQILTQRL HHHHCCCHHHHHHHHHHHHHCCCEECCHHHHHCCCCCEEHHHHHHHCCCCHHHHHHHHHH KLKNSLAIVALQHHEAVDGSGYPQRILANQIEELTKVFMIADQFAAMIHPRPYRQAILPY HHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCH EAMKIMISENVNRFDLKMVRLFLNKLSMFPVGSGVVLSDLRMGMVIESNKDKPLRPVIRV HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEECCCCCCCCHHHHC TKDAEGKRLKHLEFVDLMKDLNLYIQQAIPFSQIY CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]