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The map label for this gene is 183220928

Identifier: 183220928

GI number: 183220928

Start: 1607492

End: 1607860

Strand: Reverse

Name: 183220928

Synonym: LEPBI_I1541

Alternate gene names: NA

Gene position: 1607860-1607492 (Counterclockwise)

Preceding gene: 183220930

Following gene: 183220927

Centisome position: 44.67

GC content: 49.59

Gene sequence:

>369_bases
ATGAAGTTATCCATTGGAAACCTCCCCCAAACCCTTACGGACGAAGCCCTCGAGAAACTTCTTTCCGCTCATGGAAAGGT
GACACACCTTCAAATCAAACGAGACAAACTCACCAAGGTTTCACTCGGGTATGGAACTGCCGAAATGGCGGATGCCGATG
CGGAAAAAGCCATTGCGAGTTTGAACGGAAAGGAATTGGAAGGCAAAAAAATCGTCGTTGTCAACCAAGAAGAACTGACC
AAAGCCCAAAATGAGGCCCAAAAGAAAAAAGGAAGTCCTGCTGTGGCAAAACCCACGTTTGGTCGAAACCAAACATCTGG
CGGTGGCAATACAGGAGTCCAACGCCGAGGCGGTTCACGCGGGTCGTAG

Upstream 100 bases:

>100_bases
ATCTTTTCTTTCGACCAGAACCGCCATTTCCCCAAGAGAAAATGCGACATAGTCAAAAAAGAGTTGAAGTTTTAAGGAAT
TTTAAGGAAAAAAGAAGGAC

Downstream 100 bases:

>100_bases
ATGAAACAATTGAATGGAAGTTATCTCTCCATAGGAGCTGGAGAGAACCAAATCCCTCTCATTCGTGCAGCAAAAGGGAG
AGGCCTTAAGGTCATCGCCG

Product: putative glycine-rich RNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKLSIGNLPQTLTDEALEKLLSAHGKVTHLQIKRDKLTKVSLGYGTAEMADADAEKAIASLNGKELEGKKIVVVNQEELT
KAQNEAQKKKGSPAVAKPTFGRNQTSGGGNTGVQRRGGSRGS

Sequences:

>Translated_122_residues
MKLSIGNLPQTLTDEALEKLLSAHGKVTHLQIKRDKLTKVSLGYGTAEMADADAEKAIASLNGKELEGKKIVVVNQEELT
KAQNEAQKKKGSPAVAKPTFGRNQTSGGGNTGVQRRGGSRGS
>Mature_122_residues
MKLSIGNLPQTLTDEALEKLLSAHGKVTHLQIKRDKLTKVSLGYGTAEMADADAEKAIASLNGKELEGKKIVVVNQEELT
KAQNEAQKKKGSPAVAKPTFGRNQTSGGGNTGVQRRGGSRGS

Specific function: Unknown

COG id: COG0724

COG function: function code R; RNA-binding proteins (RRM domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12884; Mature: 12884

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS50102 RRM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSIGNLPQTLTDEALEKLLSAHGKVTHLQIKRDKLTKVSLGYGTAEMADADAEKAIAS
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCHHHCCCHHHHHHHH
LNGKELEGKKIVVVNQEELTKAQNEAQKKKGSPAVAKPTFGRNQTSGGGNTGVQRRGGSR
CCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GS
CC
>Mature Secondary Structure
MKLSIGNLPQTLTDEALEKLLSAHGKVTHLQIKRDKLTKVSLGYGTAEMADADAEKAIAS
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCHHHCCCHHHHHHHH
LNGKELEGKKIVVVNQEELTKAQNEAQKKKGSPAVAKPTFGRNQTSGGGNTGVQRRGGSR
CCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA