| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220653
Identifier: 183220653
GI number: 183220653
Start: 1307090
End: 1307842
Strand: Direct
Name: 183220653
Synonym: LEPBI_I1262
Alternate gene names: NA
Gene position: 1307090-1307842 (Clockwise)
Preceding gene: 183220652
Following gene: 183220654
Centisome position: 36.31
GC content: 40.24
Gene sequence:
>753_bases ATGAAATTCTTACAACCAATCATAATTTTTTCGATTCTTTTGACTCTGGGTAATTGTGCGGAGTTATTTTCTTCTAAGGA TAAGGACAATAATAACGATGCGATCCTTGCGGCCCTTTTGTCAAATAGTGGGACTTGTGGGCAATCGGCACGGTCTGGTG CGGCAGGAACAGGAACGCGTTATAATTTTTTCGGTTGTTCCGGGGATGCAACAACTACTTTATTAGGTTTAGGATTTACT GCCCAAAACATAACCTTCAATGGTGGACTTTCCGGAACAAGTGATGCATCCACAATTGTGACTCGTGGTAGCAGTTTGTC TTCTTCTGGAGGATCAAAGAAAGCTGGGATTGAAATCACTTATGTTTTGAACAATGCTTCATCGATTTTAAAAGCAAATT TACCAAGTGAAGCTAGTATCAATGGACCAGGATTTTCTATCTTTGCTACTGGTGCGAATAAACTTGTCAATGATGCTGCA AGTGCATTTGATGATAAACCTGCCAGTTGGAGTTCCTCGGTCGGTGTTGAAAAAATTTTGTGTCTAGAAGTTCACGAAGA AGGGACTGGAGCGCATATTTTTGGTTGGGAAGGTTCCTGTGATACTGTAAATAGGAATTCGTATCAATTTGAACAAGAAG ATGTCGCATTAGCTGTCTCTGGCGATCGAGTGGCACTGAAACTAAATAATGTTGTCGTAAAATCAATGACGATATACTCA TCTGTTATTGGTCTAGGCGCAATGATTCGATAA
Upstream 100 bases:
>100_bases AACAAAAAATCCTCTACCAAAACGCAAAAAACCGATTTTTCAAATGAAACGTGGTTGCATTTGCAACAGCGTTGCAAATG ATAGGCAAACAGAGGTAGTG
Downstream 100 bases:
>100_bases GGAAAATCTTTCAATACAGTGAAACTCGGATTCCTAAAATCTTTTTCTTATCCGCGACTGGTGGTACTCCTACTGCCAGT CTTTTTGTCGTTCTTTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKFLQPIIIFSILLTLGNCAELFSSKDKDNNNDAILAALLSNSGTCGQSARSGAAGTGTRYNFFGCSGDATTTLLGLGFT AQNITFNGGLSGTSDASTIVTRGSSLSSSGGSKKAGIEITYVLNNASSILKANLPSEASINGPGFSIFATGANKLVNDAA SAFDDKPASWSSSVGVEKILCLEVHEEGTGAHIFGWEGSCDTVNRNSYQFEQEDVALAVSGDRVALKLNNVVVKSMTIYS SVIGLGAMIR
Sequences:
>Translated_250_residues MKFLQPIIIFSILLTLGNCAELFSSKDKDNNNDAILAALLSNSGTCGQSARSGAAGTGTRYNFFGCSGDATTTLLGLGFT AQNITFNGGLSGTSDASTIVTRGSSLSSSGGSKKAGIEITYVLNNASSILKANLPSEASINGPGFSIFATGANKLVNDAA SAFDDKPASWSSSVGVEKILCLEVHEEGTGAHIFGWEGSCDTVNRNSYQFEQEDVALAVSGDRVALKLNNVVVKSMTIYS SVIGLGAMIR >Mature_250_residues MKFLQPIIIFSILLTLGNCAELFSSKDKDNNNDAILAALLSNSGTCGQSARSGAAGTGTRYNFFGCSGDATTTLLGLGFT AQNITFNGGLSGTSDASTIVTRGSSLSSSGGSKKAGIEITYVLNNASSILKANLPSEASINGPGFSIFATGANKLVNDAA SAFDDKPASWSSSVGVEKILCLEVHEEGTGAHIFGWEGSCDTVNRNSYQFEQEDVALAVSGDRVALKLNNVVVKSMTIYS SVIGLGAMIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25861; Mature: 25861
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLQPIIIFSILLTLGNCAELFSSKDKDNNNDAILAALLSNSGTCGQSARSGAAGTGTR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCE YNFFGCSGDATTTLLGLGFTAQNITFNGGLSGTSDASTIVTRGSSLSSSGGSKKAGIEIT EEEEECCCCCCEEEEECCEEECCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEE YVLNNASSILKANLPSEASINGPGFSIFATGANKLVNDAASAFDDKPASWSSSVGVEKIL EEECCCCHHEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEE CLEVHEEGTGAHIFGWEGSCDTVNRNSYQFEQEDVALAVSGDRVALKLNNVVVKSMTIYS EEEEECCCCCEEEEECCCCCCCCCCCCEEECCCCEEEEEECCEEEEEECCEEEHHHHHHH SVIGLGAMIR HHHHHHHHCC >Mature Secondary Structure MKFLQPIIIFSILLTLGNCAELFSSKDKDNNNDAILAALLSNSGTCGQSARSGAAGTGTR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCE YNFFGCSGDATTTLLGLGFTAQNITFNGGLSGTSDASTIVTRGSSLSSSGGSKKAGIEIT EEEEECCCCCCEEEEECCEEECCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEE YVLNNASSILKANLPSEASINGPGFSIFATGANKLVNDAASAFDDKPASWSSSVGVEKIL EEECCCCHHEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEE CLEVHEEGTGAHIFGWEGSCDTVNRNSYQFEQEDVALAVSGDRVALKLNNVVVKSMTIYS EEEEECCCCCEEEEECCCCCCCCCCCCEEECCCCEEEEEECCEEEEEECCEEEHHHHHHH SVIGLGAMIR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA