Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183220647

Identifier: 183220647

GI number: 183220647

Start: 1300556

End: 1301083

Strand: Reverse

Name: 183220647

Synonym: LEPBI_I1255

Alternate gene names: NA

Gene position: 1301083-1300556 (Counterclockwise)

Preceding gene: 183220648

Following gene: 183220640

Centisome position: 36.14

GC content: 38.45

Gene sequence:

>528_bases
ATGAAAGTGTATTTAGGTGACCTGCCAGTGGAACTCATTGGCAAAAGACCAAAAACAGGCGAACCTATCGATGGTAAGTT
TGGTTTTAGACCGGTGCTCAACACGAAGGCCAATTTCCCTTGTTTGGGAAACGTGAAGGGGATCGTTTTTCTTTCCACCT
TACCAAATGTCAGATCGTTTGCTTGTTCGACACAAGTCCTAGATTTAGAAGAAGAAGTGATCAAACGAAAAATACCTGCC
AAAATTTTCCATCTTGCTTCTTGTGGAAAAGAATCTTGGTCTGAGATCAAAAATCTCCACCCACAATTAAAAGCACATGG
ATATTCCCTTCAAAATTGTAACACCAATGATGTGAATCGCTTTAAACATAAATTAGGTGTAGGAGTGTCCAATTCAAATC
GTTTAGCACATGGACTTTTTGTATTAAAAAATGGGAAATTCATCGCTAGTTATATCCCCAAACAACAGTATGGTGTGCCA
AACATCAAACGATTTCTCAATCGATTGGAGAGAAGTTTGCATTCTTAA

Upstream 100 bases:

>100_bases
TTTGGGAAACCTTAGAAGATCCATTTCCCAATTGGGATGAGATGATGGAATCCTCTGAACAACTAACAGAATCTGAGTTG
GATCCTCTGAGGGTCACGAA

Downstream 100 bases:

>100_bases
GACAAATTTGACAGTATTCTTCTGGGGTTTCAGATTTTCCAAAAAGAAAGAAGGATCACTGAAATCCACCAGAAGAGATT
CGTTTCAATCTAAGGATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKVYLGDLPVELIGKRPKTGEPIDGKFGFRPVLNTKANFPCLGNVKGIVFLSTLPNVRSFACSTQVLDLEEEVIKRKIPA
KIFHLASCGKESWSEIKNLHPQLKAHGYSLQNCNTNDVNRFKHKLGVGVSNSNRLAHGLFVLKNGKFIASYIPKQQYGVP
NIKRFLNRLERSLHS

Sequences:

>Translated_175_residues
MKVYLGDLPVELIGKRPKTGEPIDGKFGFRPVLNTKANFPCLGNVKGIVFLSTLPNVRSFACSTQVLDLEEEVIKRKIPA
KIFHLASCGKESWSEIKNLHPQLKAHGYSLQNCNTNDVNRFKHKLGVGVSNSNRLAHGLFVLKNGKFIASYIPKQQYGVP
NIKRFLNRLERSLHS
>Mature_175_residues
MKVYLGDLPVELIGKRPKTGEPIDGKFGFRPVLNTKANFPCLGNVKGIVFLSTLPNVRSFACSTQVLDLEEEVIKRKIPA
KIFHLASCGKESWSEIKNLHPQLKAHGYSLQNCNTNDVNRFKHKLGVGVSNSNRLAHGLFVLKNGKFIASYIPKQQYGVP
NIKRFLNRLERSLHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19641; Mature: 19641

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVYLGDLPVELIGKRPKTGEPIDGKFGFRPVLNTKANFPCLGNVKGIVFLSTLPNVRSF
CEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCHHHH
ACSTQVLDLEEEVIKRKIPAKIFHLASCGKESWSEIKNLHPQLKAHGYSLQNCNTNDVNR
HHHHHHCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCHHHHHCCEECCCCCCHHHHH
FKHKLGVGVSNSNRLAHGLFVLKNGKFIASYIPKQQYGVPNIKRFLNRLERSLHS
HHHHHCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVYLGDLPVELIGKRPKTGEPIDGKFGFRPVLNTKANFPCLGNVKGIVFLSTLPNVRSF
CEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCHHHH
ACSTQVLDLEEEVIKRKIPAKIFHLASCGKESWSEIKNLHPQLKAHGYSLQNCNTNDVNR
HHHHHHCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCHHHHHCCEECCCCCCHHHHH
FKHKLGVGVSNSNRLAHGLFVLKNGKFIASYIPKQQYGVPNIKRFLNRLERSLHS
HHHHHCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA