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The map label for this gene is 183220631

Identifier: 183220631

GI number: 183220631

Start: 1287957

End: 1289183

Strand: Direct

Name: 183220631

Synonym: LEPBI_I1238

Alternate gene names: NA

Gene position: 1287957-1289183 (Clockwise)

Preceding gene: 183220630

Following gene: 183220632

Centisome position: 35.78

GC content: 34.15

Gene sequence:

>1227_bases
ATGGATGAATTAGCTGTTTTGCCTCATTTGTTCCGATTGGAATATTCCAAAATTGTATCTGTACTGTGCAAACGGTATGG
ATTCCATCAAATTGAAACGGCTGAGGATATCGCCAGTGAAACATTTTTAGTCGCGTCCCAGGCATGGGGTAACAATGGGA
TTCCCGAGAAACCCGTTGCTTGGTTGTATGCAGTAGCAAAAAATAAGGCTAAAAATTTAATCCAAAGAGATTCACTTTAT
CAGAATAAAATCCTACCACGTTACCAAATTGAAAATTATGTAGAGGATCATGATTTTGATCTCTCAGAAGAAAATGTAAA
GGATAGTCAATTGAGAATGCTTTTTGCCCTTTCTCATCCTTTGATTCCTTTAGAATCTCAGATTGGTATATCACTTAAGA
TTTTATGCGGTTTTGGGATAGAAGAAATAGCAAAAGTATTTCTTTCAAATAAGGAAACGATAAATAAAAGATTGTCCCGA
GCCAAGGAAAAACTAAGGGAAAACAATATTTCTCTCGAATTACCATCATCAGATGATCTAAAGTCTAGATTAACGTCCGT
TCTTCGAACGATATATTTAATATTCAATGAAGGTTATGCCTCTCATAACCAGGATAAAATTTTGAGAAAAGATTTCTGTT
TGGAAGCAATTCGTCTTTGTACTTTTTTATTGGAAAATGAGAAAACGAATACACCTGAAGTAAATGCTCTCCTGTCACTA
TTTTGTTTTCATATATCAAGATTTGATGCAAGAATGAATGATGCTGGTGAAATCGTTTTATTCGAAGATCAGAATCGTAA
TCTTTGGAATCAAGAATTCATTCAAAAAGGTGAGTATTTTTTTATACAGTCAAACAAGGATCGGAACATTTCTAAATATC
ATTTAGAAGCTGCAATTGCATATTGGCATACTTTGTCTGAAGACAAGGTGGATAAATGGGAAACAATTTATACTCTTTAT
ACTGGTCTTTTAGAATTTGAATCTTCTCAAATTTTATTATTAAATCGTGCTTATGCGCTTTTTCGTTTTAAGGGTAGGGA
CGAAGCTCTGGAAGAGCTGGGACGATTAGATTTCCCTTCAAATCGTTATTATTTTTCTTTATTAGGTGAGATATATTGTG
AGTTCGATCGAAAAAAAGCGAAAGATTGTTTTCGCAAAGCGTATTCGATGGCAGAGAAACCAAGTGATCGGTTGGCAATT
CAAAAGAGAATGAATCTAATGGAGTAA

Upstream 100 bases:

>100_bases
AATGCCCCATTCTTTTGGGTGAAGGGAATAGCGTCGAAATCCGAAAGATAATGGGCATTCATAAGGAAGAATAAAGGCTT
GTTCTGGATTTTTAAATTGT

Downstream 100 bases:

>100_bases
GATTTTGAAAATGGATCCGAAAGTGATTCAATTGATGATTCGCTTACTATTTTTTACTTTTCAAAGTGCAACGACTCAGT
AGTGGGATTGCCAACACATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MDELAVLPHLFRLEYSKIVSVLCKRYGFHQIETAEDIASETFLVASQAWGNNGIPEKPVAWLYAVAKNKAKNLIQRDSLY
QNKILPRYQIENYVEDHDFDLSEENVKDSQLRMLFALSHPLIPLESQIGISLKILCGFGIEEIAKVFLSNKETINKRLSR
AKEKLRENNISLELPSSDDLKSRLTSVLRTIYLIFNEGYASHNQDKILRKDFCLEAIRLCTFLLENEKTNTPEVNALLSL
FCFHISRFDARMNDAGEIVLFEDQNRNLWNQEFIQKGEYFFIQSNKDRNISKYHLEAAIAYWHTLSEDKVDKWETIYTLY
TGLLEFESSQILLLNRAYALFRFKGRDEALEELGRLDFPSNRYYFSLLGEIYCEFDRKKAKDCFRKAYSMAEKPSDRLAI
QKRMNLME

Sequences:

>Translated_408_residues
MDELAVLPHLFRLEYSKIVSVLCKRYGFHQIETAEDIASETFLVASQAWGNNGIPEKPVAWLYAVAKNKAKNLIQRDSLY
QNKILPRYQIENYVEDHDFDLSEENVKDSQLRMLFALSHPLIPLESQIGISLKILCGFGIEEIAKVFLSNKETINKRLSR
AKEKLRENNISLELPSSDDLKSRLTSVLRTIYLIFNEGYASHNQDKILRKDFCLEAIRLCTFLLENEKTNTPEVNALLSL
FCFHISRFDARMNDAGEIVLFEDQNRNLWNQEFIQKGEYFFIQSNKDRNISKYHLEAAIAYWHTLSEDKVDKWETIYTLY
TGLLEFESSQILLLNRAYALFRFKGRDEALEELGRLDFPSNRYYFSLLGEIYCEFDRKKAKDCFRKAYSMAEKPSDRLAI
QKRMNLME
>Mature_408_residues
MDELAVLPHLFRLEYSKIVSVLCKRYGFHQIETAEDIASETFLVASQAWGNNGIPEKPVAWLYAVAKNKAKNLIQRDSLY
QNKILPRYQIENYVEDHDFDLSEENVKDSQLRMLFALSHPLIPLESQIGISLKILCGFGIEEIAKVFLSNKETINKRLSR
AKEKLRENNISLELPSSDDLKSRLTSVLRTIYLIFNEGYASHNQDKILRKDFCLEAIRLCTFLLENEKTNTPEVNALLSL
FCFHISRFDARMNDAGEIVLFEDQNRNLWNQEFIQKGEYFFIQSNKDRNISKYHLEAAIAYWHTLSEDKVDKWETIYTLY
TGLLEFESSQILLLNRAYALFRFKGRDEALEELGRLDFPSNRYYFSLLGEIYCEFDRKKAKDCFRKAYSMAEKPSDRLAI
QKRMNLME

Specific function: Unknown

COG id: COG4941

COG function: function code K; Predicted RNA polymerase sigma factor containing a TPR repeat domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR014284
- InterPro:   IPR007627
- InterPro:   IPR013249
- InterPro:   IPR013325
- InterPro:   IPR013324 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 47798; Mature: 47798

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELAVLPHLFRLEYSKIVSVLCKRYGFHQIETAEDIASETFLVASQAWGNNGIPEKPVA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCHHH
WLYAVAKNKAKNLIQRDSLYQNKILPRYQIENYVEDHDFDLSEENVKDSQLRMLFALSHP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
LIPLESQIGISLKILCGFGIEEIAKVFLSNKETINKRLSRAKEKLRENNISLELPSSDDL
CCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCCCHH
KSRLTSVLRTIYLIFNEGYASHNQDKILRKDFCLEAIRLCTFLLENEKTNTPEVNALLSL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FCFHISRFDARMNDAGEIVLFEDQNRNLWNQEFIQKGEYFFIQSNKDRNISKYHLEAAIA
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
YWHTLSEDKVDKWETIYTLYTGLLEFESSQILLLNRAYALFRFKGRDEALEELGRLDFPS
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHEEHEEECCCHHHHHHHHCCCCCC
NRYYFSLLGEIYCEFDRKKAKDCFRKAYSMAEKPSDRLAIQKRMNLME
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MDELAVLPHLFRLEYSKIVSVLCKRYGFHQIETAEDIASETFLVASQAWGNNGIPEKPVA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEEEECCCCCCCCCCCHHH
WLYAVAKNKAKNLIQRDSLYQNKILPRYQIENYVEDHDFDLSEENVKDSQLRMLFALSHP
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
LIPLESQIGISLKILCGFGIEEIAKVFLSNKETINKRLSRAKEKLRENNISLELPSSDDL
CCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCCCHH
KSRLTSVLRTIYLIFNEGYASHNQDKILRKDFCLEAIRLCTFLLENEKTNTPEVNALLSL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
FCFHISRFDARMNDAGEIVLFEDQNRNLWNQEFIQKGEYFFIQSNKDRNISKYHLEAAIA
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
YWHTLSEDKVDKWETIYTLYTGLLEFESSQILLLNRAYALFRFKGRDEALEELGRLDFPS
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHEEHEEECCCHHHHHHHHCCCCCC
NRYYFSLLGEIYCEFDRKKAKDCFRKAYSMAEKPSDRLAIQKRMNLME
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430; 7751302 [H]