| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is fusA [H]
Identifier: 183220549
GI number: 183220549
Start: 1199542
End: 1201662
Strand: Reverse
Name: fusA [H]
Synonym: LEPBI_I1153
Alternate gene names: 183220549
Gene position: 1201662-1199542 (Counterclockwise)
Preceding gene: 183220555
Following gene: 183220548
Centisome position: 33.38
GC content: 45.12
Gene sequence:
>2121_bases ATGACCTCTGCGACGCAAGCAACCAAACGTGATCCAAAATTGGAAAGAATCCGTAACATCGGGATTTCCGCACACATTGA CTCTGGGAAAACAACCCTTACAGAACGTATCTTATTTTATACGAACAAAATCCATGCCATCCACGAAGTACGTGGAAAAG ACGGTGTGGGTGCTACGATGGATAGTATGGACCTCGAACGAGAAAGAGGGATCACAATCCAATCCGCAGCAACGTATGCG ACATGGAAAGACATCACCATCAACATCATTGACACTCCGGGCCACGTTGACTTCACGATCGAAGTAGAACGTTCCCTTCG TGTCCTTGACTCTGCGATTATGGTCCTTTGTGGGGTTGCGGGTGTTCAGTCCCAGTCCATTACAGTTGACCGCCAGATGA AACGTTATAGTGTTCCGCGTGTTGCCTTTATCAACAAACTTGATAGAACAGGTGCGAACCCATGGCGCGTCATCGAACAA CTTCGTGAAAAACTCCACCTCAACGCACATGCAGTACAACTTCCCATCGGACTCGAAAACGACCTGAAAGGGATCGTTGA CCTTGTGGAGATGAAGGCATATTATTTTGAAGGTCCAAACGGACAAGACATCAAAATCACTGATATCCCAGATGAGTTAA AAGACCAAGCCAACGAAAAACGTGAGGCACTTCTGGATGCAGTTTCCCTTTTCAGTGACGAACTCACAGAAGAGATGTTG GAAGGAACTCCTTCTGAAGCGCGAGTGAAAGAAGCGATCCGTCGTGGAGTACTCGCACTGAAATTTGTTCCTGTATTTAT GGGTTCCGCGTTTAAAAACAAAGGGGTACAAAGACTCCTTGATGGCGTTGCAGATTACCTCGCATCTCCATACGATGTGG AAAACAAAGCAAAAGAAATTGGAAACGAAGAAAACGAATTCAATTTGGAATCCGATCCAGAAAAACCACTCGTTTGCCTT GCCTTCAAATTAGAAGACGGGCGATACGGTCAGTTAACTTACGTTCGTGTTTACCAAGGTAGACTCGAAAAAGGGATGAC GATCTATAACTCCTCAAACAACAAACGCCATAACATTGGACGTCTGGTTCGTATGCACTCAAACGATATGGAAGATATCG CAAAAGCAGAAGCAGGTGACATTGTTGCTCTATTTGGTATTGATTGTGCCTCTGGGGATACCTTCACTGATGGAAAAGCA AAAGTGACGATGGAGTCTATGTTTGTTCCAAACCCGGTGATTTCACTTACCATCGAATGTAAAGAATCCAAACAACTTCC AAACCTTGCGAAAGCTCTCAACCGATTCACAAAGGAAGACCCAACTTTCCAAACAGAAATCGACAAAGAGTCGGGACAAA CCATCATCAAAGGGATGGGAGAACTCCACCTCGAAGTGTACATCGAACGTATGAAACGGGAATACGGAGTGGATTTAGTC ACAGGAGCTCCGCAAGTTGCTTACCGTGAAACCATCACTAAGGCTGCCGATTTCGACTACACACACAAAAAACAAACGGG TGGTCAAGGTCAGTTCTCTCGAGTGGCAGGTTTTATCGAACCAATCCCCCAAGAAGAAGGAAAAGACTACGAATTCGTGG ATAAAATTGTGGGTGGATCCATCCCTCGCGAATACATCGGTTCTTGCGATAAGGGTTTTCGCTCTTGTTTAGAGAGAGGA TCTCTCATTGGATTCCCTATCATTGGAGTTCGTTGTGTGATCAATGACGGTGCTTACCATGATGTGGATTCATCGGATAT GGCCTTCCAAATTGGTGCTCGTTACGGATTCCGCCAAGGATTCTCGAAAGCAGCTCCGATCATTCTTGAGCCAATCATGA GAGTGGAAGTGGAAGGACCGACAGAATTCCAAGGAGCCATCCTTGCCTCTGTGAACCAAAGACGTGGTATGATCTTAAAC ACGACAGAAGAGAACGGTTATGCGAAAATTGAAGCAGAAGTTCCTCTTGCTGATATGTTTGGGTATTCGACTGTATTACG TTCGTCGACACAAGGAAAGGCTGAGTTTGCGATGGAATTCTCCAAGTATGCTCCTGTTCCAAGAAACGTAGCAGACGAGC TCATGAAAAAATACAAAGTCAATAACAAAGACGAAGAATAA
Upstream 100 bases:
>100_bases GATTTTCCCTCTAACCAAAAATCCCAAGTACTTTACAAACGCAGTCCATTTCAGATTTTGGTAGAATCAATTCAACTTTA ACCTTATTTTTGAGGAAAAT
Downstream 100 bases:
>100_bases ATCTTCGTTTTTACAACCAATTGATTTTGGAAAAGGCGGGTCCTCCCGCCTTTTTTATTGCCCTCTCCCTTTTTCCTGTC GATACTTCCCTTAGGGATTT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 706; Mature: 705
Protein sequence:
>706_residues MTSATQATKRDPKLERIRNIGISAHIDSGKTTLTERILFYTNKIHAIHEVRGKDGVGATMDSMDLERERGITIQSAATYA TWKDITINIIDTPGHVDFTIEVERSLRVLDSAIMVLCGVAGVQSQSITVDRQMKRYSVPRVAFINKLDRTGANPWRVIEQ LREKLHLNAHAVQLPIGLENDLKGIVDLVEMKAYYFEGPNGQDIKITDIPDELKDQANEKREALLDAVSLFSDELTEEML EGTPSEARVKEAIRRGVLALKFVPVFMGSAFKNKGVQRLLDGVADYLASPYDVENKAKEIGNEENEFNLESDPEKPLVCL AFKLEDGRYGQLTYVRVYQGRLEKGMTIYNSSNNKRHNIGRLVRMHSNDMEDIAKAEAGDIVALFGIDCASGDTFTDGKA KVTMESMFVPNPVISLTIECKESKQLPNLAKALNRFTKEDPTFQTEIDKESGQTIIKGMGELHLEVYIERMKREYGVDLV TGAPQVAYRETITKAADFDYTHKKQTGGQGQFSRVAGFIEPIPQEEGKDYEFVDKIVGGSIPREYIGSCDKGFRSCLERG SLIGFPIIGVRCVINDGAYHDVDSSDMAFQIGARYGFRQGFSKAAPIILEPIMRVEVEGPTEFQGAILASVNQRRGMILN TTEENGYAKIEAEVPLADMFGYSTVLRSSTQGKAEFAMEFSKYAPVPRNVADELMKKYKVNNKDEE
Sequences:
>Translated_706_residues MTSATQATKRDPKLERIRNIGISAHIDSGKTTLTERILFYTNKIHAIHEVRGKDGVGATMDSMDLERERGITIQSAATYA TWKDITINIIDTPGHVDFTIEVERSLRVLDSAIMVLCGVAGVQSQSITVDRQMKRYSVPRVAFINKLDRTGANPWRVIEQ LREKLHLNAHAVQLPIGLENDLKGIVDLVEMKAYYFEGPNGQDIKITDIPDELKDQANEKREALLDAVSLFSDELTEEML EGTPSEARVKEAIRRGVLALKFVPVFMGSAFKNKGVQRLLDGVADYLASPYDVENKAKEIGNEENEFNLESDPEKPLVCL AFKLEDGRYGQLTYVRVYQGRLEKGMTIYNSSNNKRHNIGRLVRMHSNDMEDIAKAEAGDIVALFGIDCASGDTFTDGKA KVTMESMFVPNPVISLTIECKESKQLPNLAKALNRFTKEDPTFQTEIDKESGQTIIKGMGELHLEVYIERMKREYGVDLV TGAPQVAYRETITKAADFDYTHKKQTGGQGQFSRVAGFIEPIPQEEGKDYEFVDKIVGGSIPREYIGSCDKGFRSCLERG SLIGFPIIGVRCVINDGAYHDVDSSDMAFQIGARYGFRQGFSKAAPIILEPIMRVEVEGPTEFQGAILASVNQRRGMILN TTEENGYAKIEAEVPLADMFGYSTVLRSSTQGKAEFAMEFSKYAPVPRNVADELMKKYKVNNKDEE >Mature_705_residues TSATQATKRDPKLERIRNIGISAHIDSGKTTLTERILFYTNKIHAIHEVRGKDGVGATMDSMDLERERGITIQSAATYAT WKDITINIIDTPGHVDFTIEVERSLRVLDSAIMVLCGVAGVQSQSITVDRQMKRYSVPRVAFINKLDRTGANPWRVIEQL REKLHLNAHAVQLPIGLENDLKGIVDLVEMKAYYFEGPNGQDIKITDIPDELKDQANEKREALLDAVSLFSDELTEEMLE GTPSEARVKEAIRRGVLALKFVPVFMGSAFKNKGVQRLLDGVADYLASPYDVENKAKEIGNEENEFNLESDPEKPLVCLA FKLEDGRYGQLTYVRVYQGRLEKGMTIYNSSNNKRHNIGRLVRMHSNDMEDIAKAEAGDIVALFGIDCASGDTFTDGKAK VTMESMFVPNPVISLTIECKESKQLPNLAKALNRFTKEDPTFQTEIDKESGQTIIKGMGELHLEVYIERMKREYGVDLVT GAPQVAYRETITKAADFDYTHKKQTGGQGQFSRVAGFIEPIPQEEGKDYEFVDKIVGGSIPREYIGSCDKGFRSCLERGS LIGFPIIGVRCVINDGAYHDVDSSDMAFQIGARYGFRQGFSKAAPIILEPIMRVEVEGPTEFQGAILASVNQRRGMILNT TEENGYAKIEAEVPLADMFGYSTVLRSSTQGKAEFAMEFSKYAPVPRNVADELMKKYKVNNKDEE
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=694, Percent_Identity=53.314121037464, Blast_Score=755, Evalue=0.0, Organism=Homo sapiens, GI19923640, Length=718, Percent_Identity=36.3509749303621, Blast_Score=394, Evalue=1e-109, Organism=Homo sapiens, GI25306283, Length=401, Percent_Identity=41.1471321695761, Blast_Score=260, Evalue=3e-69, Organism=Homo sapiens, GI25306287, Length=294, Percent_Identity=46.2585034013605, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI4503483, Length=480, Percent_Identity=24.5833333333333, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI157426893, Length=195, Percent_Identity=30.7692307692308, Blast_Score=94, Evalue=6e-19, Organism=Homo sapiens, GI94966754, Length=137, Percent_Identity=43.0656934306569, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI310132016, Length=113, Percent_Identity=42.4778761061947, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI310110807, Length=113, Percent_Identity=42.4778761061947, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI310123363, Length=113, Percent_Identity=42.4778761061947, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1789738, Length=702, Percent_Identity=48.4330484330484, Blast_Score=617, Evalue=1e-178, Organism=Escherichia coli, GI1790835, Length=489, Percent_Identity=26.9938650306748, Blast_Score=174, Evalue=2e-44, Organism=Escherichia coli, GI48994988, Length=178, Percent_Identity=39.8876404494382, Blast_Score=119, Evalue=7e-28, Organism=Escherichia coli, GI1788922, Length=161, Percent_Identity=36.6459627329193, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17533571, Length=693, Percent_Identity=50.6493506493506, Blast_Score=705, Evalue=0.0, Organism=Caenorhabditis elegans, GI17556745, Length=725, Percent_Identity=28.4137931034483, Blast_Score=275, Evalue=8e-74, Organism=Caenorhabditis elegans, GI17506493, Length=479, Percent_Identity=25.678496868476, Blast_Score=115, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17557151, Length=195, Percent_Identity=33.8461538461538, Blast_Score=102, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71988819, Length=201, Percent_Identity=30.8457711442786, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71988811, Length=201, Percent_Identity=30.8457711442786, Blast_Score=85, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6323098, Length=694, Percent_Identity=54.6109510086455, Blast_Score=781, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6322359, Length=783, Percent_Identity=29.6296296296296, Blast_Score=300, Evalue=5e-82, Organism=Saccharomyces cerevisiae, GI6324707, Length=476, Percent_Identity=25.4201680672269, Blast_Score=115, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6320593, Length=476, Percent_Identity=25.4201680672269, Blast_Score=115, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6323320, Length=168, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6324166, Length=155, Percent_Identity=33.5483870967742, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24582462, Length=704, Percent_Identity=53.9772727272727, Blast_Score=778, Evalue=0.0, Organism=Drosophila melanogaster, GI221458488, Length=724, Percent_Identity=30.3867403314917, Blast_Score=301, Evalue=1e-81, Organism=Drosophila melanogaster, GI24585711, Length=821, Percent_Identity=24.9695493300853, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24585713, Length=821, Percent_Identity=24.9695493300853, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24585709, Length=821, Percent_Identity=24.9695493300853, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI78706572, Length=153, Percent_Identity=38.562091503268, Blast_Score=101, Evalue=2e-21, Organism=Drosophila melanogaster, GI28574573, Length=144, Percent_Identity=37.5, Blast_Score=76, Evalue=9e-14,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 78809; Mature: 78677
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSATQATKRDPKLERIRNIGISAHIDSGKTTLTERILFYTNKIHAIHEVRGKDGVGATM CCCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH DSMDLERERGITIQSAATYATWKDITINIIDTPGHVDFTIEVERSLRVLDSAIMVLCGVA HHHCHHHHCCCEEECCCCEEEECCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHC GVQSQSITVDRQMKRYSVPRVAFINKLDRTGANPWRVIEQLREKLHLNAHAVQLPIGLEN CCCCCCEEHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCH DLKGIVDLVEMKAYYFEGPNGQDIKITDIPDELKDQANEKREALLDAVSLFSDELTEEML HHHHHHHHHHHHHHEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGTPSEARVKEAIRRGVLALKFVPVFMGSAFKNKGVQRLLDGVADYLASPYDVENKAKEI HCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHC GNEENEFNLESDPEKPLVCLAFKLEDGRYGQLTYVRVYQGRLEKGMTIYNSSNNKRHNIG CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEHHHHHCCEEEEECCCCCHHHHH RLVRMHSNDMEDIAKAEAGDIVALFGIDCASGDTFTDGKAKVTMESMFVPNPVISLTIEC HHHHHCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCCCCEEEEEHHHCCCCCEEEEEEEE KESKQLPNLAKALNRFTKEDPTFQTEIDKESGQTIIKGMGELHLEVYIERMKREYGVDLV CCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE TGAPQVAYRETITKAADFDYTHKKQTGGQGQFSRVAGFIEPIPQEEGKDYEFVDKIVGGS CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC IPREYIGSCDKGFRSCLERGSLIGFPIIGVRCVINDGAYHDVDSSDMAFQIGARYGFRQG CCHHHHCCHHHHHHHHHHCCCEECCCEEEEEEEEECCCCCCCCCCCCEEEECCHHHHHHC FSKAAPIILEPIMRVEVEGPTEFQGAILASVNQRRGMILNTTEENGYAKIEAEVPLADMF CCCCCCHHHCCCCEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCHHHHH GYSTVLRSSTQGKAEFAMEFSKYAPVPRNVADELMKKYKVNNKDEE HHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TSATQATKRDPKLERIRNIGISAHIDSGKTTLTERILFYTNKIHAIHEVRGKDGVGATM CCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH DSMDLERERGITIQSAATYATWKDITINIIDTPGHVDFTIEVERSLRVLDSAIMVLCGVA HHHCHHHHCCCEEECCCCEEEECCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHC GVQSQSITVDRQMKRYSVPRVAFINKLDRTGANPWRVIEQLREKLHLNAHAVQLPIGLEN CCCCCCEEHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCH DLKGIVDLVEMKAYYFEGPNGQDIKITDIPDELKDQANEKREALLDAVSLFSDELTEEML HHHHHHHHHHHHHHEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGTPSEARVKEAIRRGVLALKFVPVFMGSAFKNKGVQRLLDGVADYLASPYDVENKAKEI HCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHC GNEENEFNLESDPEKPLVCLAFKLEDGRYGQLTYVRVYQGRLEKGMTIYNSSNNKRHNIG CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEHHHHHCCEEEEECCCCCHHHHH RLVRMHSNDMEDIAKAEAGDIVALFGIDCASGDTFTDGKAKVTMESMFVPNPVISLTIEC HHHHHCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCCCCEEEEEHHHCCCCCEEEEEEEE KESKQLPNLAKALNRFTKEDPTFQTEIDKESGQTIIKGMGELHLEVYIERMKREYGVDLV CCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE TGAPQVAYRETITKAADFDYTHKKQTGGQGQFSRVAGFIEPIPQEEGKDYEFVDKIVGGS CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC IPREYIGSCDKGFRSCLERGSLIGFPIIGVRCVINDGAYHDVDSSDMAFQIGARYGFRQG CCHHHHCCHHHHHHHHHHCCCEECCCEEEEEEEEECCCCCCCCCCCCEEEECCHHHHHHC FSKAAPIILEPIMRVEVEGPTEFQGAILASVNQRRGMILNTTEENGYAKIEAEVPLADMF CCCCCCHHHCCCCEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCHHHHH GYSTVLRSSTQGKAEFAMEFSKYAPVPRNVADELMKKYKVNNKDEE HHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA