| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220546
Identifier: 183220546
GI number: 183220546
Start: 1196480
End: 1197535
Strand: Reverse
Name: 183220546
Synonym: LEPBI_I1150
Alternate gene names: NA
Gene position: 1197535-1196480 (Counterclockwise)
Preceding gene: 183220547
Following gene: 183220545
Centisome position: 33.27
GC content: 41.19
Gene sequence:
>1056_bases TTGACAGGTCCGATAATTCGTAATTACAAAGGTGGTTCCATCGTCTACTTTGAGAAAGACAAAGCAGAAGATATCTTTGT ACTACAAAAAGGCCGAGTTGTACTAACTTACACGAATATCAATGGTGTGGAACTCAAAGAAGATGTGAAACTTGGTGAGT TTTTTGGTGTGAAGAGTGCCATAGGGCGTTATCCTAGAGAAGAAACAGCACAAGTCATTGGAGCAGCGACTGTCCTTGTC TTCAAAGTCCCTGAATTTGAAAAATTTGTCTCCGACAAAACCCATCTCATCATCAAAATGCTCAAAGTCTTTTCAAGCCA ACTACGGCAAGTCCATAGACAGGTTAGGGAAATCCTCGGACAAGGGGAAGCCAAGAACCCTGCATTTGAACTCATGAATG TCGCAGAAGTTTTTTATAAAAATGGTAACTTTGATCATGCGGCTTATGCATTTGAAAAATACATCCAACATTATCCGGAC GGAATGTACTTGGATCGTGCCAAACAACTTCTAGACCTTGCACGTAAAAAAACTCCATTTCCTCTCACCATACAAGAGTT AGTTTATAAACCGGAACCAGGATCCCAAACAGGGAAACTCCAAGAGATGTTGAAGACGATGGCAGTGCAAGCGCCGAATG CAACGTCGAACGTCGATCCAAATTCTATCCTTTCCCAATACGATAAGGCATCGACATTTATGAATGCGGGAAAGTATGCG GATGCCATCGATCTATTCAAAAAGGTTTCGGATCGGACAGATTCCGTGACCCAAGAAGAAGAACAATTTGTCGAAAATTC CCTTTTTTACATGGGTAAATCGAGTTTCAAAGCGAAAGATTACCCAAGTGCCATTTCTCATTTTTCCAATTTTATCAAAC GATACCCAAAAGGACTTTTGCTGAAAGAAAACCTTTACCATTTGGCTCTCGCAACAGAAGCCTCCGGCGATAAAGAAAAA TCCAAACAACTCTTTCAAAAGGTAACACAGATGCCTCCAATGGATGATAGTATCTCAGAAGATGCGAAATCCAAACTCAA AGGAGGGAGATCGTGA
Upstream 100 bases:
>100_bases CCAAAAAAACTCATGAAACAAGTTTCTGAGAGTGTTGGTTACAAAAAGAGTTTGGCTTTTTTACCTAATTTTTGAAAATG AAGTGCAAGCGAGGCATGAG
Downstream 100 bases:
>100_bases ACGACCAAATGTTGGAAGCCATGTTTGGAAAATTTGGAAAGGTATTCCAACCAAACGAAGTTTTGTTTTGCGAATACGAA CCTGGGAACGATTTTTACCT
Product: putative cAMP binding protein
Products: NA
Alternate protein names: Catabolite Gene Activator
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTGPIIRNYKGGSIVYFEKDKAEDIFVLQKGRVVLTYTNINGVELKEDVKLGEFFGVKSAIGRYPREETAQVIGAATVLV FKVPEFEKFVSDKTHLIIKMLKVFSSQLRQVHRQVREILGQGEAKNPAFELMNVAEVFYKNGNFDHAAYAFEKYIQHYPD GMYLDRAKQLLDLARKKTPFPLTIQELVYKPEPGSQTGKLQEMLKTMAVQAPNATSNVDPNSILSQYDKASTFMNAGKYA DAIDLFKKVSDRTDSVTQEEEQFVENSLFYMGKSSFKAKDYPSAISHFSNFIKRYPKGLLLKENLYHLALATEASGDKEK SKQLFQKVTQMPPMDDSISEDAKSKLKGGRS
Sequences:
>Translated_351_residues MTGPIIRNYKGGSIVYFEKDKAEDIFVLQKGRVVLTYTNINGVELKEDVKLGEFFGVKSAIGRYPREETAQVIGAATVLV FKVPEFEKFVSDKTHLIIKMLKVFSSQLRQVHRQVREILGQGEAKNPAFELMNVAEVFYKNGNFDHAAYAFEKYIQHYPD GMYLDRAKQLLDLARKKTPFPLTIQELVYKPEPGSQTGKLQEMLKTMAVQAPNATSNVDPNSILSQYDKASTFMNAGKYA DAIDLFKKVSDRTDSVTQEEEQFVENSLFYMGKSSFKAKDYPSAISHFSNFIKRYPKGLLLKENLYHLALATEASGDKEK SKQLFQKVTQMPPMDDSISEDAKSKLKGGRS >Mature_350_residues TGPIIRNYKGGSIVYFEKDKAEDIFVLQKGRVVLTYTNINGVELKEDVKLGEFFGVKSAIGRYPREETAQVIGAATVLVF KVPEFEKFVSDKTHLIIKMLKVFSSQLRQVHRQVREILGQGEAKNPAFELMNVAEVFYKNGNFDHAAYAFEKYIQHYPDG MYLDRAKQLLDLARKKTPFPLTIQELVYKPEPGSQTGKLQEMLKTMAVQAPNATSNVDPNSILSQYDKASTFMNAGKYAD AIDLFKKVSDRTDSVTQEEEQFVENSLFYMGKSSFKAKDYPSAISHFSNFIKRYPKGLLLKENLYHLALATEASGDKEKS KQLFQKVTQMPPMDDSISEDAKSKLKGGRS
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39713; Mature: 39582
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS50042 CNMP_BINDING_3 ; PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPIIRNYKGGSIVYFEKDKAEDIFVLQKGRVVLTYTNINGVELKEDVKLGEFFGVKSA CCCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCCHHHHCCHHHHHHHHHH IGRYPREETAQVIGAATVLVFKVPEFEKFVSDKTHLIIKMLKVFSSQLRQVHRQVREILG HHCCCHHHHHHHHHHHHHEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC QGEAKNPAFELMNVAEVFYKNGNFDHAAYAFEKYIQHYPDGMYLDRAKQLLDLARKKTPF CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC PLTIQELVYKPEPGSQTGKLQEMLKTMAVQAPNATSNVDPNSILSQYDKASTFMNAGKYA CEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHH DAIDLFKKVSDRTDSVTQEEEQFVENSLFYMGKSSFKAKDYPSAISHFSNFIKRYPKGLL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCE LKENLYHLALATEASGDKEKSKQLFQKVTQMPPMDDSISEDAKSKLKGGRS ECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure TGPIIRNYKGGSIVYFEKDKAEDIFVLQKGRVVLTYTNINGVELKEDVKLGEFFGVKSA CCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCCHHHHCCHHHHHHHHHH IGRYPREETAQVIGAATVLVFKVPEFEKFVSDKTHLIIKMLKVFSSQLRQVHRQVREILG HHCCCHHHHHHHHHHHHHEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC QGEAKNPAFELMNVAEVFYKNGNFDHAAYAFEKYIQHYPDGMYLDRAKQLLDLARKKTPF CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC PLTIQELVYKPEPGSQTGKLQEMLKTMAVQAPNATSNVDPNSILSQYDKASTFMNAGKYA CEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHH DAIDLFKKVSDRTDSVTQEEEQFVENSLFYMGKSSFKAKDYPSAISHFSNFIKRYPKGLL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCE LKENLYHLALATEASGDKEKSKQLFQKVTQMPPMDDSISEDAKSKLKGGRS ECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA