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The map label for this gene is etfB [H]

Identifier: 183220531

GI number: 183220531

Start: 1181061

End: 1181822

Strand: Reverse

Name: etfB [H]

Synonym: LEPBI_I1133

Alternate gene names: 183220531

Gene position: 1181822-1181061 (Counterclockwise)

Preceding gene: 183220532

Following gene: 183220530

Centisome position: 32.83

GC content: 44.88

Gene sequence:

>762_bases
ATGAAAATTGTTGTTCTAGTAAAGCAGGTTCCGGATACGGAAACCAATATCAAGGTCGGTGACAAATCGATCAACGAAGC
TGGCGTAAAATGGATCATCTCTCCTTATGATGAATTCGCTATCGAAGAGGGAATTAGAATTCGTGAAAAAAGCGGTGGAG
AAGTCATCGCTATCTCCCTCGGTCCGGACCGTGTCGTAGAAGCACTTCGCACTGCCTACGCTATGGGAGTCGACAGAGCC
GTTCATGTAAAAGTGGATGACTATGTAACTTTTGATTCTACATACACTTCCGAACTCCTTGCAAATTTCATCAAAGCAGA
AAATGCAGATGTTATCATTGGTGGTCGTCAATCGATCGATACTGACAGCTCACAAGTAGTGGTGCAAATTGCAGAGAGAT
TGAATGTCCCTCACGTAGCAATGGCACTCAAACTGGAGTTTGACGGTAACAAAGTAACTGCCACTCGCGAAATCGAGGGT
GGAACAGAAGTTGTGGAAACATCTGCTCCTCTTGCAGTGACTGCTCAAAAAGGTTTGAACGAACCAAGATACCCAAGTTT
AAAAGGAATCATGTCTGCGAAGAAAAAACCAGTCGATGTGAAAAAACCAGACGAACTCGGTGCAACTGGATCCAAACTCG
AAGTTGTCTCTCTCGAACCACCTCCTCCACGTATCGCTGGTCGAAAACTGGAAGCAGCAGATGCACAAGGTTTTGCATCT
CAACTTGTAAAAGCTCTTCGCGAAGAAGCGAAGGTCATCTAA

Upstream 100 bases:

>100_bases
ATTGGTCCAAATACAGCTTCTTTCGAGAATAAATTACTTCCCTTATCACTTCCCTCTCGTTTTCTGGTCTTAAGGTAATC
CACGAAAACGGGGTTAAGGA

Downstream 100 bases:

>100_bases
GGAGACGAACATGGCTGATGTTTTAGTAGTTGGTGAATTAAAAAACGGCGAACTTAAAAAAATCTCAAAAGAACTCACTT
CGGCAGCTCGCAAAATTGCG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKIVVLVKQVPDTETNIKVGDKSINEAGVKWIISPYDEFAIEEGIRIREKSGGEVIAISLGPDRVVEALRTAYAMGVDRA
VHVKVDDYVTFDSTYTSELLANFIKAENADVIIGGRQSIDTDSSQVVVQIAERLNVPHVAMALKLEFDGNKVTATREIEG
GTEVVETSAPLAVTAQKGLNEPRYPSLKGIMSAKKKPVDVKKPDELGATGSKLEVVSLEPPPPRIAGRKLEAADAQGFAS
QLVKALREEAKVI

Sequences:

>Translated_253_residues
MKIVVLVKQVPDTETNIKVGDKSINEAGVKWIISPYDEFAIEEGIRIREKSGGEVIAISLGPDRVVEALRTAYAMGVDRA
VHVKVDDYVTFDSTYTSELLANFIKAENADVIIGGRQSIDTDSSQVVVQIAERLNVPHVAMALKLEFDGNKVTATREIEG
GTEVVETSAPLAVTAQKGLNEPRYPSLKGIMSAKKKPVDVKKPDELGATGSKLEVVSLEPPPPRIAGRKLEAADAQGFAS
QLVKALREEAKVI
>Mature_253_residues
MKIVVLVKQVPDTETNIKVGDKSINEAGVKWIISPYDEFAIEEGIRIREKSGGEVIAISLGPDRVVEALRTAYAMGVDRA
VHVKVDDYVTFDSTYTSELLANFIKAENADVIIGGRQSIDTDSSQVVVQIAERLNVPHVAMALKLEFDGNKVTATREIEG
GTEVVETSAPLAVTAQKGLNEPRYPSLKGIMSAKKKPVDVKKPDELGATGSKLEVVSLEPPPPRIAGRKLEAADAQGFAS
QLVKALREEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=240, Percent_Identity=39.5833333333333, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI62420877, Length=229, Percent_Identity=39.7379912663755, Blast_Score=150, Evalue=1e-36,
Organism=Escherichia coli, GI87081682, Length=213, Percent_Identity=30.5164319248826, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI2367123, Length=242, Percent_Identity=25.2066115702479, Blast_Score=64, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI25141345, Length=262, Percent_Identity=37.4045801526718, Blast_Score=134, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6321646, Length=257, Percent_Identity=32.295719844358, Blast_Score=124, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24651147, Length=253, Percent_Identity=39.1304347826087, Blast_Score=143, Evalue=9e-35,
Organism=Drosophila melanogaster, GI24651145, Length=253, Percent_Identity=39.1304347826087, Blast_Score=143, Evalue=9e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27319; Mature: 27319

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVVLVKQVPDTETNIKVGDKSINEAGVKWIISPYDEFAIEEGIRIREKSGGEVIAISL
CEEEEEEEECCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHCCCEEEECCCCCEEEEEC
GPDRVVEALRTAYAMGVDRAVHVKVDDYVTFDSTYTSELLANFIKAENADVIIGGRQSID
CHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHCCCCCEEECCCCCCC
TDSSQVVVQIAERLNVPHVAMALKLEFDGNKVTATREIEGGTEVVETSAPLAVTAQKGLN
CCCHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEECCCCCEEEECCCCEEEEHHHCCC
EPRYPSLKGIMSAKKKPVDVKKPDELGATGSKLEVVSLEPPPPRIAGRKLEAADAQGFAS
CCCCCCHHHHHHHCCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCCCCEECCCCHHHHHH
QLVKALREEAKVI
HHHHHHHHHHCCC
>Mature Secondary Structure
MKIVVLVKQVPDTETNIKVGDKSINEAGVKWIISPYDEFAIEEGIRIREKSGGEVIAISL
CEEEEEEEECCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHCCCEEEECCCCCEEEEEC
GPDRVVEALRTAYAMGVDRAVHVKVDDYVTFDSTYTSELLANFIKAENADVIIGGRQSID
CHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCHHHHHHHHHHHHCCCCCEEECCCCCCC
TDSSQVVVQIAERLNVPHVAMALKLEFDGNKVTATREIEGGTEVVETSAPLAVTAQKGLN
CCCHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEECCCCCEEEECCCCEEEEHHHCCC
EPRYPSLKGIMSAKKKPVDVKKPDELGATGSKLEVVSLEPPPPRIAGRKLEAADAQGFAS
CCCCCCHHHHHHHCCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCCCCEECCCCHHHHHH
QLVKALREEAKVI
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]