| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is ygcG [H]
Identifier: 183220504
GI number: 183220504
Start: 1149777
End: 1151555
Strand: Reverse
Name: ygcG [H]
Synonym: LEPBI_I1105
Alternate gene names: 183220504
Gene position: 1151555-1149777 (Counterclockwise)
Preceding gene: 183220505
Following gene: 183220495
Centisome position: 31.99
GC content: 37.94
Gene sequence:
>1779_bases ATGAAGTTATATGTTGTCTGTTTAGCATTTCTCCATATATTATATTGCCAACGAACCAAGGACCCATATCCAGAACTTAC GGGTCCTGTGATCGACCCGAGTGTTTACCTTCCTTTGGAGGTAAAATCCAAACTAGAAACGATGCTTCTCGAAGCAGAAA AGGCCACGACCAATCAAGTCGTAGTTTTCATCACAAAAAAATTAAACGAAGATACAATAGAAAAGGAAGCGATTGCCGTA TTTGAAAAATGGAAACTAGGTCAAAAAGACAAAGACAATGGAATTTTATTCCTACTAGCTCCAAATGAAAGGAAAGTAAG GATCGAAGTCGGTTATGGATTGGAATCGGTTCTTACCGATCTAGTCGCCAAACGAATCATAGACGAAATAGTCATTCCCA ATATCAAATCAGGGAATCCTTCACTAGCAATGTTGAATGGAACACGTGCCATTTTAGAGCACCTCCACTCCGGTTCCCCG AATCTCACCAATCAAAATTGTCCAAATTCCTTTAGTGATACAAATGGTGATTTGCACCCCGATACGATTCCATTTCTTCA AAGAGAAATCAAAAGCTTAAAATCGGTGGATTTTTACTTTTGTATCTTACCTTTGGATACTCAATTTGGAGTGGAAGCAG CAACAAACAAATTATACCTACACCGACAAAAGTCTAGTTCCAATACAAAATCGATCGTGTTTGTTACTTCACCCAATTCT GATTATCTAGGATCGATCGTCACAAGCCCCGAATTCAATTGGTCTCTGAGTCAAAACAAAATCAGAACTATTTTTAGAAA TCGATATCAGGAAAGACATAGTGGTGATTTTACCAATTTTACTTACCGTGCTTTTTTAGATATGTTAGATCATATCAAAC ACAACCAAAAGTTTGAATTGGAAAAAGGCACAGGAATCTTTGATCCCTATGGCGCTTTGGAAACTTTCTCTTTTACCAGA ACAAATGAAACGATTCAAAAACTAGAAAATAAATATAAAGTTGGCATTCAGATCCTACTTCTAGATACAAAGTATGACCT TTCCGACGAAGCAAAAAATTTCCATAACCTTAACTTTGGTAAATCACCAGGAATTACCTTACTCTTTTCGTTGAACCAAA AAAAAATCTTTGTGTTTACGGATGAATATTCAATCATCCAAGGCCCCGATGGAAATAGCCCCAAAACAATCATAAACCAT ACTTTGAACGAGATGGTGAATTCGGCGATCGCTTCTGATTTCAAATCCGCAGATATTGATTGGATGAGCATCCGAAGTGC GGAGGGAATCGATTCCTATCTCAATCATTTGCAAGATCAGAAATCTTTAGTGGAAAGCCGAGTCACAGAAGCAACAATTA AGAGTGGATCTAATGAATATAAAATGGCAGAAGCTCATTTCATATTCAACTTGATATTTGCACTTATGTTTTTTGTCACC TGGGTTGGTTTGGCTTCAGGTGAAGGGATCCTATTCTTTTATGGTTTGTTTTATATAATTGGTCAAATTGTAAGAGGGAA ACTATTGCTTATCCCTGATTCACCTAACCTATACCAGATGATACTTCTGTTTGCATCCGCAATCTTAAGTTATCTCTTCG TTACATTCTTTCGAAAAATTGGTTGGGCAAACAAAGTTAGTACAAGCACACAAGATTTTTTCACTCCATCTTCCTCTAGT TCTGGTTCTAACTCCGGTTCTAGTTACCGATCTTCAAGTAGCTCCTATTCAGGAGGAGGGGGAAGGTCAGGAGGTGGAGG TGCGAGCGGTAGTTGGTAA
Upstream 100 bases:
>100_bases ATCCTTTTTATTATTTGTACTTGGGACTTGGGAAAGTAAAAGATGGAATCATTTGGTTGTTTGTTCAGGAAATTCCAAAA GAAACCTAACGAACGTTTGT
Downstream 100 bases:
>100_bases ACGAATTTTTAGGCTTTGATCAATCTTTGTGCGGAATGGATCATTTGAGATTTCATACGTTCAATCACTTTACGATCTTT GGTTAAAGCATACAAACGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 592; Mature: 592
Protein sequence:
>592_residues MKLYVVCLAFLHILYCQRTKDPYPELTGPVIDPSVYLPLEVKSKLETMLLEAEKATTNQVVVFITKKLNEDTIEKEAIAV FEKWKLGQKDKDNGILFLLAPNERKVRIEVGYGLESVLTDLVAKRIIDEIVIPNIKSGNPSLAMLNGTRAILEHLHSGSP NLTNQNCPNSFSDTNGDLHPDTIPFLQREIKSLKSVDFYFCILPLDTQFGVEAATNKLYLHRQKSSSNTKSIVFVTSPNS DYLGSIVTSPEFNWSLSQNKIRTIFRNRYQERHSGDFTNFTYRAFLDMLDHIKHNQKFELEKGTGIFDPYGALETFSFTR TNETIQKLENKYKVGIQILLLDTKYDLSDEAKNFHNLNFGKSPGITLLFSLNQKKIFVFTDEYSIIQGPDGNSPKTIINH TLNEMVNSAIASDFKSADIDWMSIRSAEGIDSYLNHLQDQKSLVESRVTEATIKSGSNEYKMAEAHFIFNLIFALMFFVT WVGLASGEGILFFYGLFYIIGQIVRGKLLLIPDSPNLYQMILLFASAILSYLFVTFFRKIGWANKVSTSTQDFFTPSSSS SGSNSGSSYRSSSSSYSGGGGRSGGGGASGSW
Sequences:
>Translated_592_residues MKLYVVCLAFLHILYCQRTKDPYPELTGPVIDPSVYLPLEVKSKLETMLLEAEKATTNQVVVFITKKLNEDTIEKEAIAV FEKWKLGQKDKDNGILFLLAPNERKVRIEVGYGLESVLTDLVAKRIIDEIVIPNIKSGNPSLAMLNGTRAILEHLHSGSP NLTNQNCPNSFSDTNGDLHPDTIPFLQREIKSLKSVDFYFCILPLDTQFGVEAATNKLYLHRQKSSSNTKSIVFVTSPNS DYLGSIVTSPEFNWSLSQNKIRTIFRNRYQERHSGDFTNFTYRAFLDMLDHIKHNQKFELEKGTGIFDPYGALETFSFTR TNETIQKLENKYKVGIQILLLDTKYDLSDEAKNFHNLNFGKSPGITLLFSLNQKKIFVFTDEYSIIQGPDGNSPKTIINH TLNEMVNSAIASDFKSADIDWMSIRSAEGIDSYLNHLQDQKSLVESRVTEATIKSGSNEYKMAEAHFIFNLIFALMFFVT WVGLASGEGILFFYGLFYIIGQIVRGKLLLIPDSPNLYQMILLFASAILSYLFVTFFRKIGWANKVSTSTQDFFTPSSSS SGSNSGSSYRSSSSSYSGGGGRSGGGGASGSW >Mature_592_residues MKLYVVCLAFLHILYCQRTKDPYPELTGPVIDPSVYLPLEVKSKLETMLLEAEKATTNQVVVFITKKLNEDTIEKEAIAV FEKWKLGQKDKDNGILFLLAPNERKVRIEVGYGLESVLTDLVAKRIIDEIVIPNIKSGNPSLAMLNGTRAILEHLHSGSP NLTNQNCPNSFSDTNGDLHPDTIPFLQREIKSLKSVDFYFCILPLDTQFGVEAATNKLYLHRQKSSSNTKSIVFVTSPNS DYLGSIVTSPEFNWSLSQNKIRTIFRNRYQERHSGDFTNFTYRAFLDMLDHIKHNQKFELEKGTGIFDPYGALETFSFTR TNETIQKLENKYKVGIQILLLDTKYDLSDEAKNFHNLNFGKSPGITLLFSLNQKKIFVFTDEYSIIQGPDGNSPKTIINH TLNEMVNSAIASDFKSADIDWMSIRSAEGIDSYLNHLQDQKSLVESRVTEATIKSGSNEYKMAEAHFIFNLIFALMFFVT WVGLASGEGILFFYGLFYIIGQIVRGKLLLIPDSPNLYQMILLFASAILSYLFVTFFRKIGWANKVSTSTQDFFTPSSSS SGSNSGSSYRSSSSSYSGGGGRSGGGGASGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=113, Percent_Identity=38.0530973451327, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 66384; Mature: 66384
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYVVCLAFLHILYCQRTKDPYPELTGPVIDPSVYLPLEVKSKLETMLLEAEKATTNQV CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCE VVFITKKLNEDTIEKEAIAVFEKWKLGQKDKDNGILFLLAPNERKVRIEVGYGLESVLTD EEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHH LVAKRIIDEIVIPNIKSGNPSLAMLNGTRAILEHLHSGSPNLTNQNCPNSFSDTNGDLHP HHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC DTIPFLQREIKSLKSVDFYFCILPLDTQFGVEAATNKLYLHRQKSSSNTKSIVFVTSPNS CHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHCCEEEEEECCCCCCCEEEEEEECCCC DYLGSIVTSPEFNWSLSQNKIRTIFRNRYQERHSGDFTNFTYRAFLDMLDHIKHNQKFEL CCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEE EKGTGIFDPYGALETFSFTRTNETIQKLENKYKVGIQILLLDTKYDLSDEAKNFHNLNFG CCCCCCCCCCCCHHHEEECHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHCCCCCCCC KSPGITLLFSLNQKKIFVFTDEYSIIQGPDGNSPKTIINHTLNEMVNSAIASDFKSADID CCCCEEEEEEECCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC WMSIRSAEGIDSYLNHLQDQKSLVESRVTEATIKSGSNEYKMAEAHFIFNLIFALMFFVT CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH WVGLASGEGILFFYGLFYIIGQIVRGKLLLIPDSPNLYQMILLFASAILSYLFVTFFRKI HHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH GWANKVSTSTQDFFTPSSSSSGSNSGSSYRSSSSSYSGGGGRSGGGGASGSW CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLYVVCLAFLHILYCQRTKDPYPELTGPVIDPSVYLPLEVKSKLETMLLEAEKATTNQV CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCE VVFITKKLNEDTIEKEAIAVFEKWKLGQKDKDNGILFLLAPNERKVRIEVGYGLESVLTD EEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCHHHHHHH LVAKRIIDEIVIPNIKSGNPSLAMLNGTRAILEHLHSGSPNLTNQNCPNSFSDTNGDLHP HHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC DTIPFLQREIKSLKSVDFYFCILPLDTQFGVEAATNKLYLHRQKSSSNTKSIVFVTSPNS CHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHCCEEEEEECCCCCCCEEEEEEECCCC DYLGSIVTSPEFNWSLSQNKIRTIFRNRYQERHSGDFTNFTYRAFLDMLDHIKHNQKFEL CCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEE EKGTGIFDPYGALETFSFTRTNETIQKLENKYKVGIQILLLDTKYDLSDEAKNFHNLNFG CCCCCCCCCCCCHHHEEECHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHCCCCCCCC KSPGITLLFSLNQKKIFVFTDEYSIIQGPDGNSPKTIINHTLNEMVNSAIASDFKSADID CCCCEEEEEEECCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC WMSIRSAEGIDSYLNHLQDQKSLVESRVTEATIKSGSNEYKMAEAHFIFNLIFALMFFVT CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH WVGLASGEGILFFYGLFYIIGQIVRGKLLLIPDSPNLYQMILLFASAILSYLFVTFFRKI HHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH GWANKVSTSTQDFFTPSSSSSGSNSGSSYRSSSSSYSGGGGRSGGGGASGSW CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]