| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is ybbP [H]
Identifier: 183220147
GI number: 183220147
Start: 749635
End: 750465
Strand: Direct
Name: ybbP [H]
Synonym: LEPBI_I0735
Alternate gene names: 183220147
Gene position: 749635-750465 (Clockwise)
Preceding gene: 183220146
Following gene: 183220148
Centisome position: 20.83
GC content: 40.79
Gene sequence:
>831_bases TTGGATTTTTTTCGAGGATTATACATCATTCCGTGGAGTAAAAATTATATCTCCATTACACTTGATGTACTCATCGTCGC GTTTCTGATTTATAAAACATACACAACATTACGCAGAACCCGTGGTATCCAACTTCTCCTCGGTGTGGGAATTATTTGGA TTTCAGGGAGTTTTGCTGAATACTTAGGATTTGAATTACTCGAATGGATCCTCACTAATATTCGGCCAGCATTGGTTTTT GCTATCATCGTTCTTTTACAACCCGAGTTACGTCGTCTAACAGGTGATTTAGCGCGGATACGTCTCCTTCGATTGTTTTT TTTGAAACCTTCCTTTGATTTGGATCCCATTGTGGAAGCGGTGCGTGCCATGTCCCAAGAAAAAATTGGATCCATCATTG TGCTTGTGAAAGACATAAGCCTGAAAGATATTTCGGAGAATGCAGTGCCGATGGACTCACTAGTCACTTCCGAAATATTA CAAACTATCTTCTTTAAAAATTCACCACTCCATGATGGGGCTGTTATCATCGAGCAAAATCGTATTGTTTGTGCGGCATC TTATTTGCCAATGAGTAGTTCTGTTGAGATTTCAACTTTAGGGGCAAGGCATAGATCGGCACTTGGCCTTTCCGAAGAAA CAGATTCCATCATCATTGTCACCTCTGAAGAAACTGGTGACATCACGATTTGTTACGAAGGAGAAATGATCCATCCAGTC AAACCTCTAGAGCTAAAAGCTCTCGTCAGTGGATTGATGTCAGGGAACAAACGACCCAAAGATGAATCCCTAAGAAAATC CAAAGAGAAAGATTCCGGAGTCATCATATGA
Upstream 100 bases:
>100_bases GACCGCAAAACATTTGCTAGTGGTGCAGTCAAAGCTGCCGAATTTTTACATGGCAAATCGAAAGGTTTGTACAATATGTT TGATGTTTTAGGGATTTAAA
Downstream 100 bases:
>100_bases TTTTGAAATTATTTGGAAAGATGGTTCGCAACTGGAAAGCAAAGTTGATTTCTCTTATCATTGCTAGTATCTTCTATGTA AATCTACAAAATTCAAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MDFFRGLYIIPWSKNYISITLDVLIVAFLIYKTYTTLRRTRGIQLLLGVGIIWISGSFAEYLGFELLEWILTNIRPALVF AIIVLLQPELRRLTGDLARIRLLRLFFLKPSFDLDPIVEAVRAMSQEKIGSIIVLVKDISLKDISENAVPMDSLVTSEIL QTIFFKNSPLHDGAVIIEQNRIVCAASYLPMSSSVEISTLGARHRSALGLSEETDSIIIVTSEETGDITICYEGEMIHPV KPLELKALVSGLMSGNKRPKDESLRKSKEKDSGVII
Sequences:
>Translated_276_residues MDFFRGLYIIPWSKNYISITLDVLIVAFLIYKTYTTLRRTRGIQLLLGVGIIWISGSFAEYLGFELLEWILTNIRPALVF AIIVLLQPELRRLTGDLARIRLLRLFFLKPSFDLDPIVEAVRAMSQEKIGSIIVLVKDISLKDISENAVPMDSLVTSEIL QTIFFKNSPLHDGAVIIEQNRIVCAASYLPMSSSVEISTLGARHRSALGLSEETDSIIIVTSEETGDITICYEGEMIHPV KPLELKALVSGLMSGNKRPKDESLRKSKEKDSGVII >Mature_276_residues MDFFRGLYIIPWSKNYISITLDVLIVAFLIYKTYTTLRRTRGIQLLLGVGIIWISGSFAEYLGFELLEWILTNIRPALVF AIIVLLQPELRRLTGDLARIRLLRLFFLKPSFDLDPIVEAVRAMSQEKIGSIIVLVKDISLKDISENAVPMDSLVTSEIL QTIFFKNSPLHDGAVIIEQNRIVCAASYLPMSSSVEISTLGARHRSALGLSEETDSIIIVTSEETGDITICYEGEMIHPV KPLELKALVSGLMSGNKRPKDESLRKSKEKDSGVII
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 30899; Mature: 30899
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFFRGLYIIPWSKNYISITLDVLIVAFLIYKTYTTLRRTRGIQLLLGVGIIWISGSFAE CCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEEEECCCHHH YLGFELLEWILTNIRPALVFAIIVLLQPELRRLTGDLARIRLLRLFFLKPSFDLDPIVEA HHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VRAMSQEKIGSIIVLVKDISLKDISENAVPMDSLVTSEILQTIFFKNSPLHDGAVIIEQN HHHHHHHCCCEEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECC RIVCAASYLPMSSSVEISTLGARHRSALGLSEETDSIIIVTSEETGDITICYEGEMIHPV CEEEEEECCCCCCCCEEEECCCHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCEECCC KPLELKALVSGLMSGNKRPKDESLRKSKEKDSGVII CCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure MDFFRGLYIIPWSKNYISITLDVLIVAFLIYKTYTTLRRTRGIQLLLGVGIIWISGSFAE CCCCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEEEECCCHHH YLGFELLEWILTNIRPALVFAIIVLLQPELRRLTGDLARIRLLRLFFLKPSFDLDPIVEA HHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH VRAMSQEKIGSIIVLVKDISLKDISENAVPMDSLVTSEILQTIFFKNSPLHDGAVIIEQN HHHHHHHCCCEEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECC RIVCAASYLPMSSSVEISTLGARHRSALGLSEETDSIIIVTSEETGDITICYEGEMIHPV CEEEEEECCCCCCCCEEEECCCHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCEECCC KPLELKALVSGLMSGNKRPKDESLRKSKEKDSGVII CCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]