| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220101
Identifier: 183220101
GI number: 183220101
Start: 696979
End: 697896
Strand: Direct
Name: 183220101
Synonym: LEPBI_I0689
Alternate gene names: NA
Gene position: 696979-697896 (Clockwise)
Preceding gene: 183220097
Following gene: 183220102
Centisome position: 19.36
GC content: 41.29
Gene sequence:
>918_bases ATGGGCACAAAAAACAGCAGGTTTTCGTTGGTTTCCGCACTCAAAATGGGAATGCTCTTGAGTTTGGTGTCTTTTTTCAC CCACTGCGAATACTTAAAGTCTCTGACCGAATCTAGGTACCGCAAACGGATTGGGGGAGAGCCTGCTTCCGAAAAAGACA TCGTCAATTGGAAGGAAAAACTGGCCTTGGAAGAAGCAGAGATTGAGGAGATGGAAAAACGGATCCGGAAGTTGGTCCAA AAATCCAATCAGTCTGCGGCTCTCTCTTGGAAAATTGCTCGGGCTTACATGAGGGCAGGTTCTGCTGATGTGGGCGTTCG GTATTACGAAGAAGCCATCTCGGAATCCATTCCCAATGCCAAACAAGGTGGATTTGAAATCCATTCGTATGAATCTGCCT TACCTTATTTTGAAAAGGCCATCCAATCGGGAAAACTGGATAAACAGTTGTTATACGAGACTGCCGTTGCCTATGCAAAT GCATCCAAAGATATGGGATGGGAAGTGACGCGGAGAAGCCGAGCTATATCTTTATTCAAACAATTGGTAAAGTTGGACAA AGAGGACACTCGTTTTCCTTTCCAAATGGCATTGATTTATTTTGATTCTTCTTTGAAAGATGAAGTTTGGAATGGAAAAC TAAGTAGTGGTTATGAAGAAGTTGAAATCGCATTCTCCCTTCTCGACCAAATTTTAAGGAAAGAACCTTATAATGTCCCC ACTCGATTTGCAAAGGCAAATTTTTTATACCAAGTGGGAAAAACGTCTCTGGCTTATGATGAATACTCTCGCATCAAATC CATTTTGGAAGAGATGAAAGAAAAAGGTAACATCCGAGAACCATTGGAAGAAAATACATCCTACAAAAATGTTTTAAAAA ATTTGAACCTACTTGGGGCCCAAAACAAATCAAACTGA
Upstream 100 bases:
>100_bases AGGATCTCTTTGAGATGATCTTCCCCCAAGCTTCGAAAACTAAGAGACATAATCACATTTTTTTCTTTTCATCCAAAAGA AAGAAACTAAAATCGAACCG
Downstream 100 bases:
>100_bases CCTAATCCATTGTGGTTGTTTCCATTTTGGGTCATCCCAAGGTCACCTCTTATTTACGCAAAACAAAGATTTGGCGAAGT TACAATTCCTTTCCCAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MGTKNSRFSLVSALKMGMLLSLVSFFTHCEYLKSLTESRYRKRIGGEPASEKDIVNWKEKLALEEAEIEEMEKRIRKLVQ KSNQSAALSWKIARAYMRAGSADVGVRYYEEAISESIPNAKQGGFEIHSYESALPYFEKAIQSGKLDKQLLYETAVAYAN ASKDMGWEVTRRSRAISLFKQLVKLDKEDTRFPFQMALIYFDSSLKDEVWNGKLSSGYEEVEIAFSLLDQILRKEPYNVP TRFAKANFLYQVGKTSLAYDEYSRIKSILEEMKEKGNIREPLEENTSYKNVLKNLNLLGAQNKSN
Sequences:
>Translated_305_residues MGTKNSRFSLVSALKMGMLLSLVSFFTHCEYLKSLTESRYRKRIGGEPASEKDIVNWKEKLALEEAEIEEMEKRIRKLVQ KSNQSAALSWKIARAYMRAGSADVGVRYYEEAISESIPNAKQGGFEIHSYESALPYFEKAIQSGKLDKQLLYETAVAYAN ASKDMGWEVTRRSRAISLFKQLVKLDKEDTRFPFQMALIYFDSSLKDEVWNGKLSSGYEEVEIAFSLLDQILRKEPYNVP TRFAKANFLYQVGKTSLAYDEYSRIKSILEEMKEKGNIREPLEENTSYKNVLKNLNLLGAQNKSN >Mature_304_residues GTKNSRFSLVSALKMGMLLSLVSFFTHCEYLKSLTESRYRKRIGGEPASEKDIVNWKEKLALEEAEIEEMEKRIRKLVQK SNQSAALSWKIARAYMRAGSADVGVRYYEEAISESIPNAKQGGFEIHSYESALPYFEKAIQSGKLDKQLLYETAVAYANA SKDMGWEVTRRSRAISLFKQLVKLDKEDTRFPFQMALIYFDSSLKDEVWNGKLSSGYEEVEIAFSLLDQILRKEPYNVPT RFAKANFLYQVGKTSLAYDEYSRIKSILEEMKEKGNIREPLEENTSYKNVLKNLNLLGAQNKSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34997; Mature: 34866
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTKNSRFSLVSALKMGMLLSLVSFFTHCEYLKSLTESRYRKRIGGEPASEKDIVNWKEK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LALEEAEIEEMEKRIRKLVQKSNQSAALSWKIARAYMRAGSADVGVRYYEEAISESIPNA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC KQGGFEIHSYESALPYFEKAIQSGKLDKQLLYETAVAYANASKDMGWEVTRRSRAISLFK CCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QLVKLDKEDTRFPFQMALIYFDSSLKDEVWNGKLSSGYEEVEIAFSLLDQILRKEPYNVP HHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCCCCCC TRFAKANFLYQVGKTSLAYDEYSRIKSILEEMKEKGNIREPLEENTSYKNVLKNLNLLGA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHCC QNKSN CCCCC >Mature Secondary Structure GTKNSRFSLVSALKMGMLLSLVSFFTHCEYLKSLTESRYRKRIGGEPASEKDIVNWKEK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LALEEAEIEEMEKRIRKLVQKSNQSAALSWKIARAYMRAGSADVGVRYYEEAISESIPNA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC KQGGFEIHSYESALPYFEKAIQSGKLDKQLLYETAVAYANASKDMGWEVTRRSRAISLFK CCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QLVKLDKEDTRFPFQMALIYFDSSLKDEVWNGKLSSGYEEVEIAFSLLDQILRKEPYNVP HHHHCCCCCCCCHHHHHHHHHCCHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHCCCCCCC TRFAKANFLYQVGKTSLAYDEYSRIKSILEEMKEKGNIREPLEENTSYKNVLKNLNLLGA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHCC QNKSN CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA