| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is yxiO [H]
Identifier: 183220073
GI number: 183220073
Start: 664552
End: 665907
Strand: Direct
Name: yxiO [H]
Synonym: LEPBI_I0660
Alternate gene names: 183220073
Gene position: 664552-665907 (Clockwise)
Preceding gene: 183220069
Following gene: 183220074
Centisome position: 18.46
GC content: 42.26
Gene sequence:
>1356_bases ATGTCCAAAGACAAAAACCCGGAAGCAAAAAAGAAAAAAAACCGTGAAATTTTTGGATGGTGTATGTTTGATTTTGCGAA CTCATCCTATACCACCGTCATCATCAGTGTCGTGTATTGTGAAATTTTCACAAGACTCGTCGTTCCTTCCGAAGTTGGTT CGGACAATCCGTTCCGAATGGGGAATACTCTCTGGGCCTGGGCTCTTGCTGCCTCCTATCTCTTCGTTGTTGTGACAGGA CCCATATTTGGAGCCATCACTGACTACAGTTCCAAGAAAAAATTGTTTTTATTCCTGAGTTATATCGGTTGTGTGATCGC CACTTTTTTACTCTATTATGTGGAACCTGGGATGATCTGGATGGGGATGATACTCGTTGCGTTCTCCAATTTTTTCTTTG CTTCGGGTGAAAACTTTGCTTCTAGTTTTTTGCCATTTCTCGGCTCCAAAGAAGACTTAGGCAAAATTTCTGGATACGCA TGGGGGATTGGATACTTTGGTGGGATAGGGTCTGTTGCCCTTGCTACCACACTTGGTGATTACACCCTCGATAATTTCGA AAATTTAAAGTTAGTTGGGCCATACACCGCCATCTTCTTTTTGATTGCAGCCATCCCGACCTTCCTCTTTTTGAAAGAAC CCCACCTTCCACTTGGGGTTTCTCATAAGGTGAATTATTTCAAAATTGGAAAGGACCGAGTCATCCAAACCTTAAAAGAT GCACGTAATTTCAAAGATTTGATGATTTATCTTGTTTCCTTGTTTTTTACCATGGCGGCCCTTGCGATTGTGATCTCCTT TGCTTTTATTTATGGATCCCAAGAAATTCATATAGAAGCCGAACACAAACAAGCCATGTTTATCTTCATCCAAATTGCTG CCGCAATCGGTGCCCTTGCGTTTGGAGTGATCCAAGATAGTATTGGTGCCAAAAAAACTTTTAACCTTACGCTTGTTCTC TGGCTTGTGACTTGTGCCTTGATTTATTATGTACATGATCTCACATCCATAGCCAACGAAGTGCTTGGCAAAAATTGGAC GGTACAATGGGTGTTTGTATTTATCTCCTCACTCGCAGGAATGGGCCTCGGTTCCACACAATCTGCTTCCCGAGCCCTTG TGGGTATCTTTAGTCCCGAATCCAAATCGGGTGAGTTTTTTGGGATGTGGGGACTTTCTGGTAAAATTGCCGCAGCAGCA GGACTCTTTTTGTTTGGATACATCCAAACCTTGGTGAGCTTACGAAATGCCTTTTTGGTAGTGGCTTTCTTTTACTTTTT ATCACTCATCATTAACTTTTTTGTAGATGAAGAAAGAGGAGTGGAAGCCGCCAATCGGTTCCAAGAAAAAACATGA
Upstream 100 bases:
>100_bases AATCGAAAGGATCCATACCTGAACTAATCATTTGACAGATTTACGAAAGGGAGGGAAACTCTTTAATTACTTTCATCCAA GGAAAATTCTGAAACCCTCT
Downstream 100 bases:
>100_bases TTGTAGAAGACGAGGACGATTTTGAATTACACCAGAGCCAAAGGAATTTGGCTCTCGCTACCATTGACGAATTGATGTTA ACGAAAATGGATTTGTTAGA
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSKDKNPEAKKKKNREIFGWCMFDFANSSYTTVIISVVYCEIFTRLVVPSEVGSDNPFRMGNTLWAWALAASYLFVVVTG PIFGAITDYSSKKKLFLFLSYIGCVIATFLLYYVEPGMIWMGMILVAFSNFFFASGENFASSFLPFLGSKEDLGKISGYA WGIGYFGGIGSVALATTLGDYTLDNFENLKLVGPYTAIFFLIAAIPTFLFLKEPHLPLGVSHKVNYFKIGKDRVIQTLKD ARNFKDLMIYLVSLFFTMAALAIVISFAFIYGSQEIHIEAEHKQAMFIFIQIAAAIGALAFGVIQDSIGAKKTFNLTLVL WLVTCALIYYVHDLTSIANEVLGKNWTVQWVFVFISSLAGMGLGSTQSASRALVGIFSPESKSGEFFGMWGLSGKIAAAA GLFLFGYIQTLVSLRNAFLVVAFFYFLSLIINFFVDEERGVEAANRFQEKT
Sequences:
>Translated_451_residues MSKDKNPEAKKKKNREIFGWCMFDFANSSYTTVIISVVYCEIFTRLVVPSEVGSDNPFRMGNTLWAWALAASYLFVVVTG PIFGAITDYSSKKKLFLFLSYIGCVIATFLLYYVEPGMIWMGMILVAFSNFFFASGENFASSFLPFLGSKEDLGKISGYA WGIGYFGGIGSVALATTLGDYTLDNFENLKLVGPYTAIFFLIAAIPTFLFLKEPHLPLGVSHKVNYFKIGKDRVIQTLKD ARNFKDLMIYLVSLFFTMAALAIVISFAFIYGSQEIHIEAEHKQAMFIFIQIAAAIGALAFGVIQDSIGAKKTFNLTLVL WLVTCALIYYVHDLTSIANEVLGKNWTVQWVFVFISSLAGMGLGSTQSASRALVGIFSPESKSGEFFGMWGLSGKIAAAA GLFLFGYIQTLVSLRNAFLVVAFFYFLSLIINFFVDEERGVEAANRFQEKT >Mature_450_residues SKDKNPEAKKKKNREIFGWCMFDFANSSYTTVIISVVYCEIFTRLVVPSEVGSDNPFRMGNTLWAWALAASYLFVVVTGP IFGAITDYSSKKKLFLFLSYIGCVIATFLLYYVEPGMIWMGMILVAFSNFFFASGENFASSFLPFLGSKEDLGKISGYAW GIGYFGGIGSVALATTLGDYTLDNFENLKLVGPYTAIFFLIAAIPTFLFLKEPHLPLGVSHKVNYFKIGKDRVIQTLKDA RNFKDLMIYLVSLFFTMAALAIVISFAFIYGSQEIHIEAEHKQAMFIFIQIAAAIGALAFGVIQDSIGAKKTFNLTLVLW LVTCALIYYVHDLTSIANEVLGKNWTVQWVFVFISSLAGMGLGSTQSASRALVGIFSPESKSGEFFGMWGLSGKIAAAAG LFLFGYIQTLVSLRNAFLVVAFFYFLSLIINFFVDEERGVEAANRFQEKT
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50053; Mature: 49922
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDKNPEAKKKKNREIFGWCMFDFANSSYTTVIISVVYCEIFTRLVVPSEVGSDNPFRM CCCCCCCCHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GNTLWAWALAASYLFVVVTGPIFGAITDYSSKKKLFLFLSYIGCVIATFLLYYVEPGMIW CCHHHHHHHHHHHHHHEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH MGMILVAFSNFFFASGENFASSFLPFLGSKEDLGKISGYAWGIGYFGGIGSVALATTLGD HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCEEECHHHHCCHHHHHHHHHHCC YTLDNFENLKLVGPYTAIFFLIAAIPTFLFLKEPHLPLGVSHKVNYFKIGKDRVIQTLKD CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHH ARNFKDLMIYLVSLFFTMAALAIVISFAFIYGSQEIHIEAEHKQAMFIFIQIAAAIGALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHH FGVIQDSIGAKKTFNLTLVLWLVTCALIYYVHDLTSIANEVLGKNWTVQWVFVFISSLAG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC MGLGSTQSASRALVGIFSPESKSGEFFGMWGLSGKIAAAAGLFLFGYIQTLVSLRNAFLV CCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VAFFYFLSLIINFFVDEERGVEAANRFQEKT HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC >Mature Secondary Structure SKDKNPEAKKKKNREIFGWCMFDFANSSYTTVIISVVYCEIFTRLVVPSEVGSDNPFRM CCCCCCCHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GNTLWAWALAASYLFVVVTGPIFGAITDYSSKKKLFLFLSYIGCVIATFLLYYVEPGMIW CCHHHHHHHHHHHHHHEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH MGMILVAFSNFFFASGENFASSFLPFLGSKEDLGKISGYAWGIGYFGGIGSVALATTLGD HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCEEECHHHHCCHHHHHHHHHHCC YTLDNFENLKLVGPYTAIFFLIAAIPTFLFLKEPHLPLGVSHKVNYFKIGKDRVIQTLKD CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHH ARNFKDLMIYLVSLFFTMAALAIVISFAFIYGSQEIHIEAEHKQAMFIFIQIAAAIGALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHH FGVIQDSIGAKKTFNLTLVLWLVTCALIYYVHDLTSIANEVLGKNWTVQWVFVFISSLAG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC MGLGSTQSASRALVGIFSPESKSGEFFGMWGLSGKIAAAAGLFLFGYIQTLVSLRNAFLV CCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VAFFYFLSLIINFFVDEERGVEAANRFQEKT HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]