| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is dctB [H]
Identifier: 183220032
GI number: 183220032
Start: 621042
End: 623192
Strand: Direct
Name: dctB [H]
Synonym: LEPBI_I0618
Alternate gene names: 183220032
Gene position: 621042-623192 (Clockwise)
Preceding gene: 183220031
Following gene: 183220033
Centisome position: 17.25
GC content: 33.8
Gene sequence:
>2151_bases ATGAAAACGAATTTGATTCGTCAGGCAATAAACTATGTCTTATCATTTTTGTTATTTTCATTTTCTTTTCAAAGTTTATT TGCCGAAGAAAAAGTTACCTTACACCTCAAATGGTTCCATCAATTTCAATTTGCTGGCTACTATGCAGCATATGAAAAAG GGTTCTACAAGGATGTAGGATTGGATGTTGAAATCATTGAAAGCACAGTCGGAATAAAGGGGATACATGAGAAGGTAGTA AAGACAACAGGTCAATATGGTGTAGGTAGTAATGAGATATTACTTCATAGACATATGGGAAAACCAGTTGTTGTGTTGGG TGTAATCTTTCAACATTCTCCCTCCGTTTTATTTTTTAAAAAATCTTCTAATGTTCAAAGTATTCATGATTTAGTTGGCA AACGAGTGATGTTAACTCCTTGGATGGAAGAAATCGTCGTCTACCTCAAAAAAGAAGGAATTAATACATCGGATCTTCAG ATATTAGAACACAGATTCAATCCACGAGATTTAATTGAGGGGAGAGTAGATGCTTTTTCCGGATATGCGACGACTCAGGC ATATGATTTTAAGAAAGCCGGATTTCAATTCATAGCGTATTCTCCAAGGTTAGCTGGAATTGATTTTTATGGAGATAATT TTTTTACAAGTGAAGATGAACTAAAAAAACACCCTAATCGTGTAAAAGTTTTTAGAGAAGCTACGTTACGGGGTTGGCAA TATGCGATGAGCCACCAAGAAGAAATCGCAGATCTCATATATAATAAATATTCTAAAAAAAATCCAAAGGAACGATTGTT ATTTGAAGCAGAACAAATGACACCTCTCATCCAACCTGTATTGGTAGAGATGGGATATATGAATCCTGGCCGTTGGAAAC ACATCAATGATATTTATCATGAACTTGGTATGTTGCCAAAAAACATGAATCTGAAAGGATTTTTGTACGACCCGAATCCT CCTACTAATTATGAATGGTTATACTATTCTTTTTTTATAATTTTATCTGCTGTTGGGATTATTTGGCTAATACAGTGGAA AAGGCTTAATAAACAATATTCCGAAAATTTAAAAAACCAGGTAAAACAAAGAACAGAAGAATTAAGGCAATCAAATGAAA GTTTACAAATTTTAAATCAAAGTTTGGTGAACACGTTAAAAGAACTTACTGAAGCACAAGATCGATTGTTGGCTTCGGAA AAATTGGCAGTGCTCGGTCAATTGGCTGCAGGAATGGCTCACGAATTGAATACTCCATTGGGTGCTATCGTTTCATCAAA TTTGTCTCTTTTGGATTTTCTTAAGAATAAGTTACATTCTGTGATCTCAACCATCATTCATTTTAATGAGGAAGATTCAA AACGTTATCATTTGGTTTTAGCTGAAAGTCTGGAAAATCAAACTTACATTGAAGGCAAATTGGAACGTAATCTGAAAAAA GAAATACATCTGAAATTCTCTCATTTAGAAAAAATGGATTTGTATGGAAGCCACTTACAAATGGTAATTGAAACTGGACT ATTTCGGAAACCAAATCAAATTGAATATATATTAGAAAGCGAAAGATCTTTGGAAATTTTACAAGTTGTATCAAGTATCA ATTCAGCATATCGATGTAATCAAATTATTTCAGTTGCGTCAGAAAAGGCGACACATGTAATTCGTGCCCTTAAAAATTAT TTGGTTTCGGAAAAAGAAACAACTAGCGATGAATCGATAATCGATTTGGAGTCCGAAATAGAGACTATTTTGTCTTTGTA TCATTATAATTTAAGCAAAGTAACAGTTGTTAAAAACTATGGTACTGATACAAAATGTATAGGCAATCGCGACAAACTAA ATCAAGTTTGGATCAATTTGATCAATAACGGTTTGCATGCAATGTCCTATACTGGAACGTTAGAAATTAAAATTCAATCA ATCCAAAAATGGATCAAAGTTTCCGTAATTGACTCAGGAGTCGGAGTTCCCGATGGTATAAAGGAGAAGATATTTGAGCC TTTTTTTACGACTAAACCAAACGGGGAAGGGATGGGTTTAGGTTTGGATATTTGTAGAAAAATGATCATTCAGATGGGTG GAAAAATTGAACTTGAACCAGTCAGTCAAGGAGCTTGTTTTTCTGTTTGGTTGCCAAAAGCAAAATTTTAA
Upstream 100 bases:
>100_bases AAAAAGTGAAAGGAAAAATCCAAGAAAAACAATAAAAATCAGAAACGTAAATCGTTATTTCATTGATTTACGCTAATGAA TCTTTATAAAAAAATATAGA
Downstream 100 bases:
>100_bases TTAAACTTGAATGAAATCATTATCAAAATTCCTAATATTATCTTAATCACCGATGGAACCATTAAAAGAAATATATTCTG TAGATTGGGTGAAAAACCTA
Product: putative two-component sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MKTNLIRQAINYVLSFLLFSFSFQSLFAEEKVTLHLKWFHQFQFAGYYAAYEKGFYKDVGLDVEIIESTVGIKGIHEKVV KTTGQYGVGSNEILLHRHMGKPVVVLGVIFQHSPSVLFFKKSSNVQSIHDLVGKRVMLTPWMEEIVVYLKKEGINTSDLQ ILEHRFNPRDLIEGRVDAFSGYATTQAYDFKKAGFQFIAYSPRLAGIDFYGDNFFTSEDELKKHPNRVKVFREATLRGWQ YAMSHQEEIADLIYNKYSKKNPKERLLFEAEQMTPLIQPVLVEMGYMNPGRWKHINDIYHELGMLPKNMNLKGFLYDPNP PTNYEWLYYSFFIILSAVGIIWLIQWKRLNKQYSENLKNQVKQRTEELRQSNESLQILNQSLVNTLKELTEAQDRLLASE KLAVLGQLAAGMAHELNTPLGAIVSSNLSLLDFLKNKLHSVISTIIHFNEEDSKRYHLVLAESLENQTYIEGKLERNLKK EIHLKFSHLEKMDLYGSHLQMVIETGLFRKPNQIEYILESERSLEILQVVSSINSAYRCNQIISVASEKATHVIRALKNY LVSEKETTSDESIIDLESEIETILSLYHYNLSKVTVVKNYGTDTKCIGNRDKLNQVWINLINNGLHAMSYTGTLEIKIQS IQKWIKVSVIDSGVGVPDGIKEKIFEPFFTTKPNGEGMGLGLDICRKMIIQMGGKIELEPVSQGACFSVWLPKAKF
Sequences:
>Translated_716_residues MKTNLIRQAINYVLSFLLFSFSFQSLFAEEKVTLHLKWFHQFQFAGYYAAYEKGFYKDVGLDVEIIESTVGIKGIHEKVV KTTGQYGVGSNEILLHRHMGKPVVVLGVIFQHSPSVLFFKKSSNVQSIHDLVGKRVMLTPWMEEIVVYLKKEGINTSDLQ ILEHRFNPRDLIEGRVDAFSGYATTQAYDFKKAGFQFIAYSPRLAGIDFYGDNFFTSEDELKKHPNRVKVFREATLRGWQ YAMSHQEEIADLIYNKYSKKNPKERLLFEAEQMTPLIQPVLVEMGYMNPGRWKHINDIYHELGMLPKNMNLKGFLYDPNP PTNYEWLYYSFFIILSAVGIIWLIQWKRLNKQYSENLKNQVKQRTEELRQSNESLQILNQSLVNTLKELTEAQDRLLASE KLAVLGQLAAGMAHELNTPLGAIVSSNLSLLDFLKNKLHSVISTIIHFNEEDSKRYHLVLAESLENQTYIEGKLERNLKK EIHLKFSHLEKMDLYGSHLQMVIETGLFRKPNQIEYILESERSLEILQVVSSINSAYRCNQIISVASEKATHVIRALKNY LVSEKETTSDESIIDLESEIETILSLYHYNLSKVTVVKNYGTDTKCIGNRDKLNQVWINLINNGLHAMSYTGTLEIKIQS IQKWIKVSVIDSGVGVPDGIKEKIFEPFFTTKPNGEGMGLGLDICRKMIIQMGGKIELEPVSQGACFSVWLPKAKF >Mature_716_residues MKTNLIRQAINYVLSFLLFSFSFQSLFAEEKVTLHLKWFHQFQFAGYYAAYEKGFYKDVGLDVEIIESTVGIKGIHEKVV KTTGQYGVGSNEILLHRHMGKPVVVLGVIFQHSPSVLFFKKSSNVQSIHDLVGKRVMLTPWMEEIVVYLKKEGINTSDLQ ILEHRFNPRDLIEGRVDAFSGYATTQAYDFKKAGFQFIAYSPRLAGIDFYGDNFFTSEDELKKHPNRVKVFREATLRGWQ YAMSHQEEIADLIYNKYSKKNPKERLLFEAEQMTPLIQPVLVEMGYMNPGRWKHINDIYHELGMLPKNMNLKGFLYDPNP PTNYEWLYYSFFIILSAVGIIWLIQWKRLNKQYSENLKNQVKQRTEELRQSNESLQILNQSLVNTLKELTEAQDRLLASE KLAVLGQLAAGMAHELNTPLGAIVSSNLSLLDFLKNKLHSVISTIIHFNEEDSKRYHLVLAESLENQTYIEGKLERNLKK EIHLKFSHLEKMDLYGSHLQMVIETGLFRKPNQIEYILESERSLEILQVVSSINSAYRCNQIISVASEKATHVIRALKNY LVSEKETTSDESIIDLESEIETILSLYHYNLSKVTVVKNYGTDTKCIGNRDKLNQVWINLINNGLHAMSYTGTLEIKIQS IQKWIKVSVIDSGVGVPDGIKEKIFEPFFTTKPNGEGMGLGLDICRKMIIQMGGKIELEPVSQGACFSVWLPKAKF
Specific function: Member of the two-component regulatory system dctB/dctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates dctD in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=178, Percent_Identity=29.7752808988764, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1788549, Length=109, Percent_Identity=35.7798165137615, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR017055 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 82235; Mature: 82235
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS50109 HIS_KIN ; PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNLIRQAINYVLSFLLFSFSFQSLFAEEKVTLHLKWFHQFQFAGYYAAYEKGFYKDVG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHHCC LDVEIIESTVGIKGIHEKVVKTTGQYGVGSNEILLHRHMGKPVVVLGVIFQHSPSVLFFK CCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEHHHCCCCEEEEE KSSNVQSIHDLVGKRVMLTPWMEEIVVYLKKEGINTSDLQILEHRFNPRDLIEGRVDAFS CCCCHHHHHHHHCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCHHHHHC GYATTQAYDFKKAGFQFIAYSPRLAGIDFYGDNFFTSEDELKKHPNRVKVFREATLRGWQ CCCCCCCCHHHHCCCEEEEECCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHH YAMSHQEEIADLIYNKYSKKNPKERLLFEAEQMTPLIQPVLVEMGYMNPGRWKHINDIYH HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHH ELGMLPKNMNLKGFLYDPNPPTNYEWLYYSFFIILSAVGIIWLIQWKRLNKQYSENLKNQ HHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKQRTEELRQSNESLQILNQSLVNTLKELTEAQDRLLASEKLAVLGQLAAGMAHELNTPL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH GAIVSSNLSLLDFLKNKLHSVISTIIHFNEEDSKRYHLVLAESLENQTYIEGKLERNLKK HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCEEHHHHHHHHHH EIHLKFSHLEKMDLYGSHLQMVIETGLFRKPNQIEYILESERSLEILQVVSSINSAYRCN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH QIISVASEKATHVIRALKNYLVSEKETTSDESIIDLESEIETILSLYHYNLSKVTVVKNY HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHHHHHHHHHHHCCCCEEEEEECC GTDTKCIGNRDKLNQVWINLINNGLHAMSYTGTLEIKIQSIQKWIKVSVIDSGVGVPDGI CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEHHHHHHHHEEEEEECCCCCCCCH KEKIFEPFFTTKPNGEGMGLGLDICRKMIIQMGGKIELEPVSQGACFSVWLPKAKF HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCC >Mature Secondary Structure MKTNLIRQAINYVLSFLLFSFSFQSLFAEEKVTLHLKWFHQFQFAGYYAAYEKGFYKDVG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHHCC LDVEIIESTVGIKGIHEKVVKTTGQYGVGSNEILLHRHMGKPVVVLGVIFQHSPSVLFFK CCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEHHHCCCCEEEEE KSSNVQSIHDLVGKRVMLTPWMEEIVVYLKKEGINTSDLQILEHRFNPRDLIEGRVDAFS CCCCHHHHHHHHCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCHHHHHC GYATTQAYDFKKAGFQFIAYSPRLAGIDFYGDNFFTSEDELKKHPNRVKVFREATLRGWQ CCCCCCCCHHHHCCCEEEEECCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHH YAMSHQEEIADLIYNKYSKKNPKERLLFEAEQMTPLIQPVLVEMGYMNPGRWKHINDIYH HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHH ELGMLPKNMNLKGFLYDPNPPTNYEWLYYSFFIILSAVGIIWLIQWKRLNKQYSENLKNQ HHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKQRTEELRQSNESLQILNQSLVNTLKELTEAQDRLLASEKLAVLGQLAAGMAHELNTPL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH GAIVSSNLSLLDFLKNKLHSVISTIIHFNEEDSKRYHLVLAESLENQTYIEGKLERNLKK HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCEEHHHHHHHHHH EIHLKFSHLEKMDLYGSHLQMVIETGLFRKPNQIEYILESERSLEILQVVSSINSAYRCN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH QIISVASEKATHVIRALKNYLVSEKETTSDESIIDLESEIETILSLYHYNLSKVTVVKNY HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHHHHHHHHHHHCCCCEEEEEECC GTDTKCIGNRDKLNQVWINLINNGLHAMSYTGTLEIKIQSIQKWIKVSVIDSGVGVPDGI CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEHHHHHHHHEEEEEECCCCCCCCH KEKIFEPFFTTKPNGEGMGLGLDICRKMIIQMGGKIELEPVSQGACFSVWLPKAKF HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2134335; 2793824; 11481431; 2551890; 2695394 [H]