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The map label for this gene is padR [H]

Identifier: 183220031

GI number: 183220031

Start: 620428

End: 620976

Strand: Direct

Name: padR [H]

Synonym: LEPBI_I0617

Alternate gene names: 183220031

Gene position: 620428-620976 (Clockwise)

Preceding gene: 183220030

Following gene: 183220032

Centisome position: 17.24

GC content: 32.6

Gene sequence:

>549_bases
ATGAAACGAGAAAGCAAAACACAATATGCACTTTTAGGAATTTTATCACAATGTGAGATGAATGGATATGAAATTCGTAA
ATACATCGAATCAACAATCAGCTTTTTTTGGAGCGAAAGTTTTGGTCAGATTTATCCAACCTTAAGTAAGTTGGAGGAAG
ATGGTTTCATAAAAGAATGGGAAAAGACAGATACCAATGGTAAGAAAAAAAAAGTATTCAAAGTCACTCGCTCTGGATTA
GAGGAATTTAGACGATGGATGGACCAATCTCCGATACAATCGAACAAAAGGAATGAACTTCTATTTAAAGTTTTTTTTGG
AAGGCACATGAATCCAAAGTTACTTGTAGAACAACTTGATTCAGAAATCAAAAAACAGAAAGACGACTTAAAAACATTGA
AAGTATTCCAAAAAGAACTAAAAACTGACTGGGACAATCATCCAGACAATGAATATTGGAACCTTACCTTAGAATATGCC
GAAAAACAAACTCATTTGAATCTGGAATGGATTCAAAAAGTGAAAGGAAAAATCCAAGAAAAACAATAA

Upstream 100 bases:

>100_bases
TCTAGTTTCATAGGGCACTGGCCTCAAATTGAGGCGCCTGCGGAAGTGGTTTCCGCCTATCTACAATTCCAGAAGGAGAT
AATTTCGAATCCCAGTTAAG

Downstream 100 bases:

>100_bases
AAATCAGAAACGTAAATCGTTATTTCATTGATTTACGCTAATGAATCTTTATAAAAAAATATAGAATGAAAACGAATTTG
ATTCGTCAGGCAATAAACTA

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKRESKTQYALLGILSQCEMNGYEIRKYIESTISFFWSESFGQIYPTLSKLEEDGFIKEWEKTDTNGKKKKVFKVTRSGL
EEFRRWMDQSPIQSNKRNELLFKVFFGRHMNPKLLVEQLDSEIKKQKDDLKTLKVFQKELKTDWDNHPDNEYWNLTLEYA
EKQTHLNLEWIQKVKGKIQEKQ

Sequences:

>Translated_182_residues
MKRESKTQYALLGILSQCEMNGYEIRKYIESTISFFWSESFGQIYPTLSKLEEDGFIKEWEKTDTNGKKKKVFKVTRSGL
EEFRRWMDQSPIQSNKRNELLFKVFFGRHMNPKLLVEQLDSEIKKQKDDLKTLKVFQKELKTDWDNHPDNEYWNLTLEYA
EKQTHLNLEWIQKVKGKIQEKQ
>Mature_182_residues
MKRESKTQYALLGILSQCEMNGYEIRKYIESTISFFWSESFGQIYPTLSKLEEDGFIKEWEKTDTNGKKKKVFKVTRSGL
EEFRRWMDQSPIQSNKRNELLFKVFFGRHMNPKLLVEQLDSEIKKQKDDLKTLKVFQKELKTDWDNHPDNEYWNLTLEYA
EKQTHLNLEWIQKVKGKIQEKQ

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 21953; Mature: 21953

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRESKTQYALLGILSQCEMNGYEIRKYIESTISFFWSESFGQIYPTLSKLEEDGFIKEW
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EKTDTNGKKKKVFKVTRSGLEEFRRWMDQSPIQSNKRNELLFKVFFGRHMNPKLLVEQLD
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
SEIKKQKDDLKTLKVFQKELKTDWDNHPDNEYWNLTLEYAEKQTHLNLEWIQKVKGKIQE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHCC
KQ
CC
>Mature Secondary Structure
MKRESKTQYALLGILSQCEMNGYEIRKYIESTISFFWSESFGQIYPTLSKLEEDGFIKEW
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
EKTDTNGKKKKVFKVTRSGLEEFRRWMDQSPIQSNKRNELLFKVFFGRHMNPKLLVEQLD
HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
SEIKKQKDDLKTLKVFQKELKTDWDNHPDNEYWNLTLEYAEKQTHLNLEWIQKVKGKIQE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHCC
KQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]