| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220027
Identifier: 183220027
GI number: 183220027
Start: 616127
End: 617809
Strand: Direct
Name: 183220027
Synonym: LEPBI_I0612
Alternate gene names: NA
Gene position: 616127-617809 (Clockwise)
Preceding gene: 183220026
Following gene: 183220028
Centisome position: 17.12
GC content: 33.81
Gene sequence:
>1683_bases TTGAATTCCATTCCATCTGGAAACAATTACGGTGATATGAAACGGAAATCACTCATTTTACTCACTTTAATTTTGCTCAT TGTGGTTCATTGCCGCAAAAAAACAGAAGAGATCCTTCTACCCGAAAAACTATACATAATTCCATTTGCGAATAACACCG TTTCCATTTACCATTCCTTAGATACCTTGGAAAGAGTGAGCGCCTTTGAAAAAGACAAATATTGGGTTGTCAGTGGGATT TTGAAATTAGTTCCTAAAAATCAAGGTGATAAGGTAATCTCATTTTTATTTGGTGATTGTGATTCAAGATTTAAATGTAC GGATGGAAAATTTTATATCAAATTAAATACAATCCAATATAACGCTGATGCAGGGTTGGATTTACAAACAAATTTGGTCG CGCCTTTTTCTCCAGTCTACATTGCCAAAAAAGACCAAGTAGATTCCATTATAGAAGGTATCCAATTTTATAACCAACCT TCATCAGAATATCCATCGAAAGGATTAAGCGATTCATTTGTTGATCATATGGTTCAAGTCAACAAATCCCTTGCTTATCA TGATAAAAATGAATTTCTAATTCCATTTTATGTTTTACAAAGAATGATCGTTACCAAAGGAAATGTAAACTTTCCAGAAT TGGATTTAACAACATATAAAATTTCCTCCACCTTACAGTCACTAATGGATGCTAAAAAAAATGGAGATTTATCATCATTT GTTTTCCCAACTCCCGTGTCCGACAAACAGATGAAAGTATTAGAGGAGTTAGTTGAGGAAACTCGTAAAGAACGTATCTT TAATTTAATGAATGTAGAAAAATCATGGCAAACCATTCAAAGAGAATATAAAGAATTAGGAATTGTTCCTGATGCAAAAC AAAAAGTTTTGGAATCGATTTTAAAAACAGCAGAATACAAAGTGGTCGGTCGTGAGGGAATCACACAAATTAATGGTATT GATTCCAAACAAGAAAATGGAGTAAAACTCCAAAAAAATAAAACAACTGGAAATTTAGAAATTGTCTCCAGTAACACAGC TTTAAATACATTTGAAATTGCCCAATCGGAAATCCTTCCCAATACAGAAGATTCGGTGAAACTTCGTTTAACAAGTCCAA CTGGCGAAGAGTTAAATCTTGAATCCATGGGAATTCCAAAAGCATTTAAAGGCGCGGAAACATTAAAGGAATATGTAAAA AACATTCCCAAGACAATTGATGAAATTCAATCTAATGCAAACAATGTCCAACAGGCAGCAATGAATGCTGCACTTCGATT TGGAGTTGGAAAGTTTGACCGAGAAGCAGGGAAATATATCTACGAAATCCAAAATGTGAATGTGGTATTGGCATTATTTA AAAACAATTCTGTGTTCAACGCGAGTGATAGTGAATATTCACAAGAGGTTTCGAGTCGATTTGGAGAAACGATTATTACG AAGTTTTATCAGAAATATGATAAGGCAACAAAAGTACAAACCTTGTTTTTAAATTATGAAAATGAAGGATGTGCGAGAGA ATGTAGTACCTATCCTGTTCCAGATAACTTATGTTTTACTACTGGGGATAGCCTGATTGTCAAGTTTACACCAAGTGATT TAGAAGCTTTATCTGAAGTTGATGTTAAGTTTAGTGCAGCAAAGTCGGAATATTGTAACTATCCATTCGGAAATCCAGAA TAG
Upstream 100 bases:
>100_bases TGGTAGCAATACAACTTCAGCATTAGGATTTAATACTTTCGGATGTACTAGCTCCCTCATGTTATATTGTGTAGAACAGT AATTAGATTCCCTTTTTTAG
Downstream 100 bases:
>100_bases TTTTTGTTTCGCTTTAAAGCGTTTGTATTTTTACTGATCTGCAATTCATTTAGTTGCAGTGAATCTAAAATACTAAATCC AATGTCCAATGGAAAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 560; Mature: 560
Protein sequence:
>560_residues MNSIPSGNNYGDMKRKSLILLTLILLIVVHCRKKTEEILLPEKLYIIPFANNTVSIYHSLDTLERVSAFEKDKYWVVSGI LKLVPKNQGDKVISFLFGDCDSRFKCTDGKFYIKLNTIQYNADAGLDLQTNLVAPFSPVYIAKKDQVDSIIEGIQFYNQP SSEYPSKGLSDSFVDHMVQVNKSLAYHDKNEFLIPFYVLQRMIVTKGNVNFPELDLTTYKISSTLQSLMDAKKNGDLSSF VFPTPVSDKQMKVLEELVEETRKERIFNLMNVEKSWQTIQREYKELGIVPDAKQKVLESILKTAEYKVVGREGITQINGI DSKQENGVKLQKNKTTGNLEIVSSNTALNTFEIAQSEILPNTEDSVKLRLTSPTGEELNLESMGIPKAFKGAETLKEYVK NIPKTIDEIQSNANNVQQAAMNAALRFGVGKFDREAGKYIYEIQNVNVVLALFKNNSVFNASDSEYSQEVSSRFGETIIT KFYQKYDKATKVQTLFLNYENEGCARECSTYPVPDNLCFTTGDSLIVKFTPSDLEALSEVDVKFSAAKSEYCNYPFGNPE
Sequences:
>Translated_560_residues MNSIPSGNNYGDMKRKSLILLTLILLIVVHCRKKTEEILLPEKLYIIPFANNTVSIYHSLDTLERVSAFEKDKYWVVSGI LKLVPKNQGDKVISFLFGDCDSRFKCTDGKFYIKLNTIQYNADAGLDLQTNLVAPFSPVYIAKKDQVDSIIEGIQFYNQP SSEYPSKGLSDSFVDHMVQVNKSLAYHDKNEFLIPFYVLQRMIVTKGNVNFPELDLTTYKISSTLQSLMDAKKNGDLSSF VFPTPVSDKQMKVLEELVEETRKERIFNLMNVEKSWQTIQREYKELGIVPDAKQKVLESILKTAEYKVVGREGITQINGI DSKQENGVKLQKNKTTGNLEIVSSNTALNTFEIAQSEILPNTEDSVKLRLTSPTGEELNLESMGIPKAFKGAETLKEYVK NIPKTIDEIQSNANNVQQAAMNAALRFGVGKFDREAGKYIYEIQNVNVVLALFKNNSVFNASDSEYSQEVSSRFGETIIT KFYQKYDKATKVQTLFLNYENEGCARECSTYPVPDNLCFTTGDSLIVKFTPSDLEALSEVDVKFSAAKSEYCNYPFGNPE >Mature_560_residues MNSIPSGNNYGDMKRKSLILLTLILLIVVHCRKKTEEILLPEKLYIIPFANNTVSIYHSLDTLERVSAFEKDKYWVVSGI LKLVPKNQGDKVISFLFGDCDSRFKCTDGKFYIKLNTIQYNADAGLDLQTNLVAPFSPVYIAKKDQVDSIIEGIQFYNQP SSEYPSKGLSDSFVDHMVQVNKSLAYHDKNEFLIPFYVLQRMIVTKGNVNFPELDLTTYKISSTLQSLMDAKKNGDLSSF VFPTPVSDKQMKVLEELVEETRKERIFNLMNVEKSWQTIQREYKELGIVPDAKQKVLESILKTAEYKVVGREGITQINGI DSKQENGVKLQKNKTTGNLEIVSSNTALNTFEIAQSEILPNTEDSVKLRLTSPTGEELNLESMGIPKAFKGAETLKEYVK NIPKTIDEIQSNANNVQQAAMNAALRFGVGKFDREAGKYIYEIQNVNVVLALFKNNSVFNASDSEYSQEVSSRFGETIIT KFYQKYDKATKVQTLFLNYENEGCARECSTYPVPDNLCFTTGDSLIVKFTPSDLEALSEVDVKFSAAKSEYCNYPFGNPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63218; Mature: 63218
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIPSGNNYGDMKRKSLILLTLILLIVVHCRKKTEEILLPEKLYIIPFANNTVSIYHSL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCEEEEEEHH DTLERVSAFEKDKYWVVSGILKLVPKNQGDKVISFLFGDCDSRFKCTDGKFYIKLNTIQY HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEECCCEEEEEEEEEEE NADAGLDLQTNLVAPFSPVYIAKKDQVDSIIEGIQFYNQPSSEYPSKGLSDSFVDHMVQV CCCCCCCEECCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH NKSLAYHDKNEFLIPFYVLQRMIVTKGNVNFPELDLTTYKISSTLQSLMDAKKNGDLSSF HHHHEEECCCCEEEHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCE VFPTPVSDKQMKVLEELVEETRKERIFNLMNVEKSWQTIQREYKELGIVPDAKQKVLESI ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LKTAEYKVVGREGITQINGIDSKQENGVKLQKNKTTGNLEIVSSNTALNTFEIAQSEILP HHHHHEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHCCC NTEDSVKLRLTSPTGEELNLESMGIPKAFKGAETLKEYVKNIPKTIDEIQSNANNVQQAA CCCCCEEEEEECCCCCCCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHH MNAALRFGVGKFDREAGKYIYEIQNVNVVLALFKNNSVFNASDSEYSQEVSSRFGETIIT HHHHHHHCCCHHHHHHCCEEEEEECCEEEEEEEECCCEECCCCHHHHHHHHHHHHHHHHH KFYQKYDKATKVQTLFLNYENEGCARECSTYPVPDNLCFTTGDSLIVKFTPSDLEALSEV HHHHHHHHHHEEEEEEEEECCCCCHHHCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHC DVKFSAAKSEYCNYPFGNPE CCCEEHHHHHHCCCCCCCCC >Mature Secondary Structure MNSIPSGNNYGDMKRKSLILLTLILLIVVHCRKKTEEILLPEKLYIIPFANNTVSIYHSL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCEEEEEEHH DTLERVSAFEKDKYWVVSGILKLVPKNQGDKVISFLFGDCDSRFKCTDGKFYIKLNTIQY HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEECCCEEEEEEEEEEE NADAGLDLQTNLVAPFSPVYIAKKDQVDSIIEGIQFYNQPSSEYPSKGLSDSFVDHMVQV CCCCCCCEECCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH NKSLAYHDKNEFLIPFYVLQRMIVTKGNVNFPELDLTTYKISSTLQSLMDAKKNGDLSSF HHHHEEECCCCEEEHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCE VFPTPVSDKQMKVLEELVEETRKERIFNLMNVEKSWQTIQREYKELGIVPDAKQKVLESI ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LKTAEYKVVGREGITQINGIDSKQENGVKLQKNKTTGNLEIVSSNTALNTFEIAQSEILP HHHHHEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHCCC NTEDSVKLRLTSPTGEELNLESMGIPKAFKGAETLKEYVKNIPKTIDEIQSNANNVQQAA CCCCCEEEEEECCCCCCCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHH MNAALRFGVGKFDREAGKYIYEIQNVNVVLALFKNNSVFNASDSEYSQEVSSRFGETIIT HHHHHHHCCCHHHHHHCCEEEEEECCEEEEEEEECCCEECCCCHHHHHHHHHHHHHHHHH KFYQKYDKATKVQTLFLNYENEGCARECSTYPVPDNLCFTTGDSLIVKFTPSDLEALSEV HHHHHHHHHHEEEEEEEEECCCCCHHHCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHC DVKFSAAKSEYCNYPFGNPE CCCEEHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA