| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220023
Identifier: 183220023
GI number: 183220023
Start: 610619
End: 611476
Strand: Direct
Name: 183220023
Synonym: LEPBI_I0607
Alternate gene names: NA
Gene position: 610619-611476 (Clockwise)
Preceding gene: 183220018
Following gene: 183220024
Centisome position: 16.96
GC content: 35.78
Gene sequence:
>858_bases ATGATTTTCAAATTAACTATGAAAATTCAGAATTTTGTTTTTCTTTCGATTCTATCATTGAATGGATGTTCGACGAAGGA AGTCGCAATTCCAAAGGAAAATTTAAACAACGCATTGTCTTTTCCGGTTTATGCAGAGACACTTGATTCGAACGAATTCC TTTTGCCCATCATAAAGGAAACAAGCCGTCCTTCAAAAGAAGGACAAATATACTATGCGATCTTAAAAGAAAATGAGAAG GGCAAAATCCTTCGAAGCATCGCCATTCTCGTTGAAGACAAATCAATGAATTTAAAACCTGAGGAATATTTACACTATCC TATTTATTATGCAAATCATATCTCCAGACGATTTCGATTTTGGCATCACTATGACTCTTCCTATGATATACGCAGAGCCG CAGACAACTCTCCAGTGTATATGCCCGTATATGCATCGGCAAGTGTTGTCACTCTCGCTGCCTTTGGGATTGCTTATGTT GCCTCCACAGGCACTGCCTTTATAGTGGGATTAGGAAAAGGAACTTATGAATTTACAGAAGATATCTTAGAAGGAGTGAT CATCTCGAATGAAGAGATTGTATTGGCTTACAGTGATTATGTATACGATGAAAATGAAAGATTAAAAACTATTTTCACTT ATTTGCCTTATCGTTCTATTTCAAAATCTGTCATTCCCTTGTATGACAGAGAAGGCAAAAAACAAATTGGAAAAATGTTT CCCTCTTCCAAACCCATTTTACTCTCACAAATGGATTTTTCTTATACAAAATCAAATCGGAATCCAAAGTCAGTCACCTT CATTGAATTTTTACCGAAAACAAACAAAAAGGTAATTTCTCTTCCCATTCGAGACTGA
Upstream 100 bases:
>100_bases AAACGTTTCATTGTATTCGGCCTTGAGAAGAAAAATCAAAATGATTCATTTTATAATTAGAATCAATAAAAAATTGATTG TTCTTTGTTAGGGAATCTGG
Downstream 100 bases:
>100_bases AATGAAAAAGAAATTTTATATGCGACCTAGTTTTTATCTTCACTCCCTATATCTTTGTTTCGTTTTGGGACATCTATTCC TTGTCATGAGTCTCTCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MIFKLTMKIQNFVFLSILSLNGCSTKEVAIPKENLNNALSFPVYAETLDSNEFLLPIIKETSRPSKEGQIYYAILKENEK GKILRSIAILVEDKSMNLKPEEYLHYPIYYANHISRRFRFWHHYDSSYDIRRAADNSPVYMPVYASASVVTLAAFGIAYV ASTGTAFIVGLGKGTYEFTEDILEGVIISNEEIVLAYSDYVYDENERLKTIFTYLPYRSISKSVIPLYDREGKKQIGKMF PSSKPILLSQMDFSYTKSNRNPKSVTFIEFLPKTNKKVISLPIRD
Sequences:
>Translated_285_residues MIFKLTMKIQNFVFLSILSLNGCSTKEVAIPKENLNNALSFPVYAETLDSNEFLLPIIKETSRPSKEGQIYYAILKENEK GKILRSIAILVEDKSMNLKPEEYLHYPIYYANHISRRFRFWHHYDSSYDIRRAADNSPVYMPVYASASVVTLAAFGIAYV ASTGTAFIVGLGKGTYEFTEDILEGVIISNEEIVLAYSDYVYDENERLKTIFTYLPYRSISKSVIPLYDREGKKQIGKMF PSSKPILLSQMDFSYTKSNRNPKSVTFIEFLPKTNKKVISLPIRD >Mature_285_residues MIFKLTMKIQNFVFLSILSLNGCSTKEVAIPKENLNNALSFPVYAETLDSNEFLLPIIKETSRPSKEGQIYYAILKENEK GKILRSIAILVEDKSMNLKPEEYLHYPIYYANHISRRFRFWHHYDSSYDIRRAADNSPVYMPVYASASVVTLAAFGIAYV ASTGTAFIVGLGKGTYEFTEDILEGVIISNEEIVLAYSDYVYDENERLKTIFTYLPYRSISKSVIPLYDREGKKQIGKMF PSSKPILLSQMDFSYTKSNRNPKSVTFIEFLPKTNKKVISLPIRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32668; Mature: 32668
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFKLTMKIQNFVFLSILSLNGCSTKEVAIPKENLNNALSFPVYAETLDSNEFLLPIIKE CEEEEEEHHHHEEEEEEEECCCCCCCEEECCHHHCCCCCCCCEEEEECCCCCEEEEEECC TSRPSKEGQIYYAILKENEKGKILRSIAILVEDKSMNLKPEEYLHYPIYYANHISRRFRF CCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHEECCCHHHHHHHHHHHE WHHYDSSYDIRRAADNSPVYMPVYASASVVTLAAFGIAYVASTGTAFIVGLGKGTYEFTE EEECCCCCCEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH DILEGVIISNEEIVLAYSDYVYDENERLKTIFTYLPYRSISKSVIPLYDREGKKQIGKMF HHHCCEEECCCCEEEEEECEEECCCCHHHHHHHHCCCHHCCCCCCEEECCCCHHHHHHHC PSSKPILLSQMDFSYTKSNRNPKSVTFIEFLPKTNKKVISLPIRD CCCCCEEEEECCCEECCCCCCCCEEEEEEECCCCCCEEEEEECCC >Mature Secondary Structure MIFKLTMKIQNFVFLSILSLNGCSTKEVAIPKENLNNALSFPVYAETLDSNEFLLPIIKE CEEEEEEHHHHEEEEEEEECCCCCCCEEECCHHHCCCCCCCCEEEEECCCCCEEEEEECC TSRPSKEGQIYYAILKENEKGKILRSIAILVEDKSMNLKPEEYLHYPIYYANHISRRFRF CCCCCCCCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHEECCCHHHHHHHHHHHE WHHYDSSYDIRRAADNSPVYMPVYASASVVTLAAFGIAYVASTGTAFIVGLGKGTYEFTE EEECCCCCCEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH DILEGVIISNEEIVLAYSDYVYDENERLKTIFTYLPYRSISKSVIPLYDREGKKQIGKMF HHHCCEEECCCCEEEEEECEEECCCCHHHHHHHHCCCHHCCCCCCEEECCCCHHHHHHHC PSSKPILLSQMDFSYTKSNRNPKSVTFIEFLPKTNKKVISLPIRD CCCCCEEEEECCCEECCCCCCCCEEEEEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA