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The map label for this gene is fliD [H]

Identifier: 183219998

GI number: 183219998

Start: 582760

End: 584682

Strand: Direct

Name: fliD [H]

Synonym: LEPBI_I0580

Alternate gene names: 183219998

Gene position: 582760-584682 (Clockwise)

Preceding gene: 183219989

Following gene: 183219999

Centisome position: 16.19

GC content: 40.56

Gene sequence:

>1923_bases
ATGCCAGCATACACCATGCCGGGTCTGATGACTGGGCAAAACACAAACGATATCGTAAAAAAACTGGTCGATTTGGAACG
CCGGCCCATCAAACGTTGGGAAACCGAAAATGAGTATGCCAAAATGCAGATTCAGATTTGGGGTGAGGTGAAAAATCTCA
CAACCAATTTACAAACCAAAACAAGGGCCCTTGTTTCCTTTACCGCTCCTTTTGCCACAAAATCCGTATCCTCATCCGTT
GAGGGTGTCATTACCGGAGAAGCATCCCGTGCTGCCAAATCAGGTAATAAATCACTCGAAATCATACAAATGGCAAGTAA
ACACCAGTTATCTGGTGTAGAAATTGATACAGACATCCGACTCCCTGAAGGCAGTTTTACCGTATATTCTGGTAAATCCA
AAGAAACAGTCACTTTCCCTGGTGGTGGGCTTTCGGATCTCTCCAGTGCGATCAAAAATATGGCTGGGACGATTGTAGAA
GCATCGATCATTAAAATTGACAAAGATTCCTCCATCATCACCTTAACTTCTGTTAAAACTGGTAAAAAAAATGAACTCCA
ATTTTCAGACCCCAATGGGATTTTGAAATTGGCTGGCCTTGTGGGTGAGAACAAAGCGACAGAGGAAGATACCGAACAAA
ACCTTTCGTTGGATGGAACCAAAGCAAAAGCCTGGGACCCAACCAAATTTAAAAAATCGGAAGTGGAAACGGATAAACTC
ATCCAAACCGAAGAAGGGATTGTTTTAAAACCAGACACTGCGTATTCGATTCCAATTGCTGTGACTGAGATCAAAGAACG
TGCTTACTTTGAAGTTGTAGTCGAGGGGGAAGCTCCTGCGGTGATGGAACTCGGGATGAGTTTTGAAAAAGAAGGAAGTG
CCCGGAACAAATTCCTTCCTATTAATAAAACGGATTCAAAGTATAGTTTCCAAGCTGGCGATTTTGCGAGTGATAAAAAT
CTTACCGCTATCATCGTCTCCAATGCGGCCACAACTCCCATCCAAATCAAATCAGTGACACTCATCACACCACAGGCTCC
CGGTACTGCGGAACCAGTAAAAGTTTTGCAAGAAGCAAAAGATCTAAAAATCAAAATTGATGGTGTTGAGATCACTCGTG
AAACAAACGATGGGATCGCCGATGTATTGGAAGGAATTTCATTTAATGTCCATAAGGTGACAGAAGAACCTGTTACCTTA
AAAATCCATGTGGACCATGCCAAAGGTTCTGCCCTCATCAAAGAATGGGTGGATGCTTATAATGAACTCATGAAGTTTTC
AAAAGAAGTGACTTCTGTTGAAAAAAATGGAAAAATTTCTGATAAAAAAGAAAGTGATGATTCCAAGGCCGCAGATATCT
CAAGAGACTTCTGGGATAACAAATCCAAATCAGGACTTCTTGCAGGTGAAAACTCAATTTTACGACTCATTGCTTCATTA
AAAACAACTGCTAATTCTTATTACCCAGCAACCAAAGAAAATGGATTCCGAGTCCTAACAGACATTGGGATTTCCACAGG
AGCCGTCGGATCCAATTGGGAAAAAATCCAAGATGGCCTCTTACAAATTGACCAAGAAAAACTCATCGCTGTTTTGTCTG
AGAATCCAGATGGAGTGAGAGATTTATTTGCATCCGATCCGAATAACGATGCTAAGATGGAAGAAGGTGTTGGGATTCGG
CTTCTGGAAATATTAAAACCTTATAACCAATATGCATCTGGGATTGTTACAAGTAAGGTAAAACTTTTAGAAGAAAGTGT
CGCAGGGAATAATAAAAAAATCAAAGAACATGAGTCACATCTCATTAGTTTTGAAGCAAAATTAAAACAACGATTTCTCT
ACATGGAACAAGGTGTAGGGAAAAACAAATCAGTTGGAAATTACTTACAAAATAATATGTTTAGAGGGAACGGTGGGGAA
TGA

Upstream 100 bases:

>100_bases
AGCAGTCATAATTCTAGGATTTGGGAAGGAAAAAATTCTGTAAATTCCTAATCCTTTTGTAGAATTCGACGACATTAGAT
TCAGAGGGATTTGGGACGAT

Downstream 100 bases:

>100_bases
TGAATATTTTTATCAACAAACAACAATTAGATACTAAATTGGATGGTGAAACCAACCTCGGCCAAGTGTTGGATGAAATT
CAAAAATGGATTGAGTCCAA

Product: flagellar hook-associated protein FliD

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 640; Mature: 639

Protein sequence:

>640_residues
MPAYTMPGLMTGQNTNDIVKKLVDLERRPIKRWETENEYAKMQIQIWGEVKNLTTNLQTKTRALVSFTAPFATKSVSSSV
EGVITGEASRAAKSGNKSLEIIQMASKHQLSGVEIDTDIRLPEGSFTVYSGKSKETVTFPGGGLSDLSSAIKNMAGTIVE
ASIIKIDKDSSIITLTSVKTGKKNELQFSDPNGILKLAGLVGENKATEEDTEQNLSLDGTKAKAWDPTKFKKSEVETDKL
IQTEEGIVLKPDTAYSIPIAVTEIKERAYFEVVVEGEAPAVMELGMSFEKEGSARNKFLPINKTDSKYSFQAGDFASDKN
LTAIIVSNAATTPIQIKSVTLITPQAPGTAEPVKVLQEAKDLKIKIDGVEITRETNDGIADVLEGISFNVHKVTEEPVTL
KIHVDHAKGSALIKEWVDAYNELMKFSKEVTSVEKNGKISDKKESDDSKAADISRDFWDNKSKSGLLAGENSILRLIASL
KTTANSYYPATKENGFRVLTDIGISTGAVGSNWEKIQDGLLQIDQEKLIAVLSENPDGVRDLFASDPNNDAKMEEGVGIR
LLEILKPYNQYASGIVTSKVKLLEESVAGNNKKIKEHESHLISFEAKLKQRFLYMEQGVGKNKSVGNYLQNNMFRGNGGE

Sequences:

>Translated_640_residues
MPAYTMPGLMTGQNTNDIVKKLVDLERRPIKRWETENEYAKMQIQIWGEVKNLTTNLQTKTRALVSFTAPFATKSVSSSV
EGVITGEASRAAKSGNKSLEIIQMASKHQLSGVEIDTDIRLPEGSFTVYSGKSKETVTFPGGGLSDLSSAIKNMAGTIVE
ASIIKIDKDSSIITLTSVKTGKKNELQFSDPNGILKLAGLVGENKATEEDTEQNLSLDGTKAKAWDPTKFKKSEVETDKL
IQTEEGIVLKPDTAYSIPIAVTEIKERAYFEVVVEGEAPAVMELGMSFEKEGSARNKFLPINKTDSKYSFQAGDFASDKN
LTAIIVSNAATTPIQIKSVTLITPQAPGTAEPVKVLQEAKDLKIKIDGVEITRETNDGIADVLEGISFNVHKVTEEPVTL
KIHVDHAKGSALIKEWVDAYNELMKFSKEVTSVEKNGKISDKKESDDSKAADISRDFWDNKSKSGLLAGENSILRLIASL
KTTANSYYPATKENGFRVLTDIGISTGAVGSNWEKIQDGLLQIDQEKLIAVLSENPDGVRDLFASDPNNDAKMEEGVGIR
LLEILKPYNQYASGIVTSKVKLLEESVAGNNKKIKEHESHLISFEAKLKQRFLYMEQGVGKNKSVGNYLQNNMFRGNGGE
>Mature_639_residues
PAYTMPGLMTGQNTNDIVKKLVDLERRPIKRWETENEYAKMQIQIWGEVKNLTTNLQTKTRALVSFTAPFATKSVSSSVE
GVITGEASRAAKSGNKSLEIIQMASKHQLSGVEIDTDIRLPEGSFTVYSGKSKETVTFPGGGLSDLSSAIKNMAGTIVEA
SIIKIDKDSSIITLTSVKTGKKNELQFSDPNGILKLAGLVGENKATEEDTEQNLSLDGTKAKAWDPTKFKKSEVETDKLI
QTEEGIVLKPDTAYSIPIAVTEIKERAYFEVVVEGEAPAVMELGMSFEKEGSARNKFLPINKTDSKYSFQAGDFASDKNL
TAIIVSNAATTPIQIKSVTLITPQAPGTAEPVKVLQEAKDLKIKIDGVEITRETNDGIADVLEGISFNVHKVTEEPVTLK
IHVDHAKGSALIKEWVDAYNELMKFSKEVTSVEKNGKISDKKESDDSKAADISRDFWDNKSKSGLLAGENSILRLIASLK
TTANSYYPATKENGFRVLTDIGISTGAVGSNWEKIQDGLLQIDQEKLIAVLSENPDGVRDLFASDPNNDAKMEEGVGIRL
LEILKPYNQYASGIVTSKVKLLEESVAGNNKKIKEHESHLISFEAKLKQRFLYMEQGVGKNKSVGNYLQNNMFRGNGGE

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=201, Percent_Identity=26.865671641791, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 70003; Mature: 69872

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS00602 ALDOLASE_CLASS_II_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAYTMPGLMTGQNTNDIVKKLVDLERRPIKRWETENEYAKMQIQIWGEVKNLTTNLQTK
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCEEEEEEEEEEEHHHHHHHHHHH
TRALVSFTAPFATKSVSSSVEGVITGEASRAAKSGNKSLEIIQMASKHQLSGVEIDTDIR
HEEEEEEECCHHHHHHHCCCCEEEECCHHHHHHCCCCCEEEEEEHHCCCCCCEEECCCEE
LPEGSFTVYSGKSKETVTFPGGGLSDLSSAIKNMAGTIVEASIIKIDKDSSIITLTSVKT
CCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCEEEEEEECC
GKKNELQFSDPNGILKLAGLVGENKATEEDTEQNLSLDGTKAKAWDPTKFKKSEVETDKL
CCCCCEEECCCCCEEEEEEHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHH
IQTEEGIVLKPDTAYSIPIAVTEIKERAYFEVVVEGEAPAVMELGMSFEKEGSARNKFLP
EECCCCEEECCCCCEECCEEHHHHHCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCEEC
INKTDSKYSFQAGDFASDKNLTAIIVSNAATTPIQIKSVTLITPQAPGTAEPVKVLQEAK
CCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCC
DLKIKIDGVEITRETNDGIADVLEGISFNVHKVTEEPVTLKIHVDHAKGSALIKEWVDAY
CCEEEEEEEEEEECCCCCHHHHHHCCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHH
NELMKFSKEVTSVEKNGKISDKKESDDSKAADISRDFWDNKSKSGLLAGENSILRLIASL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHH
KTTANSYYPATKENGFRVLTDIGISTGAVGSNWEKIQDGLLQIDQEKLIAVLSENPDGVR
HHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHEEEEECCCCCHHH
DLFASDPNNDAKMEEGVGIRLLEILKPYNQYASGIVTSKVKLLEESVAGNNKKIKEHESH
HHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHH
LISFEAKLKQRFLYMEQGVGKNKSVGNYLQNNMFRGNGGE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PAYTMPGLMTGQNTNDIVKKLVDLERRPIKRWETENEYAKMQIQIWGEVKNLTTNLQTK
CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCEEEEEEEEEEEHHHHHHHHHHH
TRALVSFTAPFATKSVSSSVEGVITGEASRAAKSGNKSLEIIQMASKHQLSGVEIDTDIR
HEEEEEEECCHHHHHHHCCCCEEEECCHHHHHHCCCCCEEEEEEHHCCCCCCEEECCCEE
LPEGSFTVYSGKSKETVTFPGGGLSDLSSAIKNMAGTIVEASIIKIDKDSSIITLTSVKT
CCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCEEEEEEECC
GKKNELQFSDPNGILKLAGLVGENKATEEDTEQNLSLDGTKAKAWDPTKFKKSEVETDKL
CCCCCEEECCCCCEEEEEEHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHH
IQTEEGIVLKPDTAYSIPIAVTEIKERAYFEVVVEGEAPAVMELGMSFEKEGSARNKFLP
EECCCCEEECCCCCEECCEEHHHHHCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCEEC
INKTDSKYSFQAGDFASDKNLTAIIVSNAATTPIQIKSVTLITPQAPGTAEPVKVLQEAK
CCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCC
DLKIKIDGVEITRETNDGIADVLEGISFNVHKVTEEPVTLKIHVDHAKGSALIKEWVDAY
CCEEEEEEEEEEECCCCCHHHHHHCCCCEEEEECCCCEEEEEEEECCCCHHHHHHHHHHH
NELMKFSKEVTSVEKNGKISDKKESDDSKAADISRDFWDNKSKSGLLAGENSILRLIASL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHH
KTTANSYYPATKENGFRVLTDIGISTGAVGSNWEKIQDGLLQIDQEKLIAVLSENPDGVR
HHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHEEEEECCCCCHHH
DLFASDPNNDAKMEEGVGIRLLEILKPYNQYASGIVTSKVKLLEESVAGNNKKIKEHESH
HHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHH
LISFEAKLKQRFLYMEQGVGKNKSVGNYLQNNMFRGNGGE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]