| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219924
Identifier: 183219924
GI number: 183219924
Start: 503516
End: 505387
Strand: Direct
Name: 183219924
Synonym: LEPBI_I0506
Alternate gene names: NA
Gene position: 503516-505387 (Clockwise)
Preceding gene: 183219923
Following gene: 183219925
Centisome position: 13.99
GC content: 38.09
Gene sequence:
>1872_bases ATGTTATTATCAGCTGATCGAGTTTTACCGTTTGTTAGTTTAGTTTCACTTTTCGCCTATTTCTTGTTTGATGGAATGGT CGTAGATCCGAAACGAAAAATCCTTTTTTTAGGTGTTGTGTTTTTGTTTTTGGCATCGGATACGATTGTCCGAGCGTTTT CGAAAGGAATTCGAAAAGAGGACCAAAATCGTTACATTGCGGCTGTTTTTGGGATCGCAGCATTTTTACTCTCCGTCTTA CGAGATTTTTTGGATTTAAAACCAGTGGCAGGTTTTAATGAAGAGGTAAGTTCTATCCCCAAAATCAGAGAATTCCTGCT TTTATGTGTGGTTCTTTTTTCTTTGGTATTCCTTTTACAAATCATTCTGTTAGAAATTGGAAAGTCCTCTCTCGAAGCAC AAAGTAATTTAGCAAAATCCAAAAGTTCCTTATTACAAAATGCGGTGCTTGGGTTTTTGTTTGTATTACCCATACTTGTG GCTGTAAATTACTTTGCGATCAAACGAAACTATAACTTCGATTTGAGTAGCCAAGGTAAGTTCTCTTTATCACAAATTTC TCGTAACCTTATTAAACCCATCACAGAAGATGTGACCATCACAGCGTTTTACCCACGCCCACTGGAAGCTGACGGGCCTG CTAATGGTGACAAACTTGCTGCATTTGCCTTAACACGCGTAAGGCCTGATATTGAAATTTTACTCGACCAAATCAAATCA GAAAATGCACATATTACTGTTCAATTCATCAATGCCGATGTCGAAATGGATTTGTTAAGAGATTTTGGACAAGTTTCCAA TGGAACCATTTTTGTTCGTTCTAAAAAACAATCTTCTCTCACGTCTACAACACCATTTGCAGAAGAACGTGTCATCGCAA AAGAACCAAAAGATTTGGAGGACTTAGAACGTAAGTTAGTTGGTGCACTTTTAAATGTGACAACCGTGCAGAAAAAAGTT TACTTTACGGTTGCCAATGGAGAACGGTATGGAGCTTCCTTTCGAGCGCTTCCCAATGAACAAGTGAACCGTTTTGTATC TTCTTTGCAGTTTTTAAACTTTAAAGTGGCAGAACTTGGATTTGCGCAAGGTTGGCCTTCTAAATTACCAGAAGATGCCG ATATGCTTGTGATCCTTGGTCCCACTGTTCCCTTTTCCAAAGAAGCCAAAGAAGAACTCACCAAATTTGTGTTAGAGAAA AATGGGAAAGTTCTCATCACTATGGAACCAAAAGGGAGTGAAGACTTTACTTGGTTATTACAATCGGCTGGATTAAAATT TAAATCCACTCCTCTCGTCGAACGAGAAGAAAAACCAGGTTTTGTTGTTGCCAAACGATTTCCAGACAACCGTCTCACCG ATCTTTTACAAAAAAAGGATATGGGAATTTTATTTCCTTACAGTGGATTTTTAGAATCAGAACCCAATGCACCCACTCCT TATGTTTGGAAATCGGAAACCTTACTTGAGTCTGGTTTTGACGCATACCAAGATGAAAACAAAAATGGAAAACTGGATCC AAACGAAAAAAAAGAGAGTAAAATCCTTTCAGTCGTTTTATCTCCAATGTCACTCACTGGAGATAAGTTAGGAAAAATCA TATTACACACAGGAACCACTTGGATCACAGACCAATTCATTCCGTATGTGATGAACTCTCAATTTTCCACTGTTTCGATC ACGGGATTATTCCAAGACAATATCGTTGCAGAAATTCCATTAAAAAAAGAAGAAGTGGATACCATTTCATTGTCCGACAA TCAAAAGTTAGTTGCTTGGGTCATCGGAGTCTTTTTATTCCCAGGATTTATTTTGGCAGTTGGTTCTTACTTTGTATATA CCCGACGCAAACATTCCATGTTAGAAGTATGA
Upstream 100 bases:
>100_bases ATTACCATTAACAGGCATTGTATTTTTCCTAAGTGGAACTTTCCTATTTTTGTACTTAACCGTGAAGGTCTTGGAATCCA GGAGATGGAGAGGGTAAATC
Downstream 100 bases:
>100_bases AACAAAAAATCAGTTTAGTTCTTGTTGCCTTTTTGGGATTGTTTCTTCTATTTTATTTAATGGAGGATCATCCAGAAAAT ATTTCCGAAACTAATTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: ABC-Type Transporter
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MLLSADRVLPFVSLVSLFAYFLFDGMVVDPKRKILFLGVVFLFLASDTIVRAFSKGIRKEDQNRYIAAVFGIAAFLLSVL RDFLDLKPVAGFNEEVSSIPKIREFLLLCVVLFSLVFLLQIILLEIGKSSLEAQSNLAKSKSSLLQNAVLGFLFVLPILV AVNYFAIKRNYNFDLSSQGKFSLSQISRNLIKPITEDVTITAFYPRPLEADGPANGDKLAAFALTRVRPDIEILLDQIKS ENAHITVQFINADVEMDLLRDFGQVSNGTIFVRSKKQSSLTSTTPFAEERVIAKEPKDLEDLERKLVGALLNVTTVQKKV YFTVANGERYGASFRALPNEQVNRFVSSLQFLNFKVAELGFAQGWPSKLPEDADMLVILGPTVPFSKEAKEELTKFVLEK NGKVLITMEPKGSEDFTWLLQSAGLKFKSTPLVEREEKPGFVVAKRFPDNRLTDLLQKKDMGILFPYSGFLESEPNAPTP YVWKSETLLESGFDAYQDENKNGKLDPNEKKESKILSVVLSPMSLTGDKLGKIILHTGTTWITDQFIPYVMNSQFSTVSI TGLFQDNIVAEIPLKKEEVDTISLSDNQKLVAWVIGVFLFPGFILAVGSYFVYTRRKHSMLEV
Sequences:
>Translated_623_residues MLLSADRVLPFVSLVSLFAYFLFDGMVVDPKRKILFLGVVFLFLASDTIVRAFSKGIRKEDQNRYIAAVFGIAAFLLSVL RDFLDLKPVAGFNEEVSSIPKIREFLLLCVVLFSLVFLLQIILLEIGKSSLEAQSNLAKSKSSLLQNAVLGFLFVLPILV AVNYFAIKRNYNFDLSSQGKFSLSQISRNLIKPITEDVTITAFYPRPLEADGPANGDKLAAFALTRVRPDIEILLDQIKS ENAHITVQFINADVEMDLLRDFGQVSNGTIFVRSKKQSSLTSTTPFAEERVIAKEPKDLEDLERKLVGALLNVTTVQKKV YFTVANGERYGASFRALPNEQVNRFVSSLQFLNFKVAELGFAQGWPSKLPEDADMLVILGPTVPFSKEAKEELTKFVLEK NGKVLITMEPKGSEDFTWLLQSAGLKFKSTPLVEREEKPGFVVAKRFPDNRLTDLLQKKDMGILFPYSGFLESEPNAPTP YVWKSETLLESGFDAYQDENKNGKLDPNEKKESKILSVVLSPMSLTGDKLGKIILHTGTTWITDQFIPYVMNSQFSTVSI TGLFQDNIVAEIPLKKEEVDTISLSDNQKLVAWVIGVFLFPGFILAVGSYFVYTRRKHSMLEV >Mature_623_residues MLLSADRVLPFVSLVSLFAYFLFDGMVVDPKRKILFLGVVFLFLASDTIVRAFSKGIRKEDQNRYIAAVFGIAAFLLSVL RDFLDLKPVAGFNEEVSSIPKIREFLLLCVVLFSLVFLLQIILLEIGKSSLEAQSNLAKSKSSLLQNAVLGFLFVLPILV AVNYFAIKRNYNFDLSSQGKFSLSQISRNLIKPITEDVTITAFYPRPLEADGPANGDKLAAFALTRVRPDIEILLDQIKS ENAHITVQFINADVEMDLLRDFGQVSNGTIFVRSKKQSSLTSTTPFAEERVIAKEPKDLEDLERKLVGALLNVTTVQKKV YFTVANGERYGASFRALPNEQVNRFVSSLQFLNFKVAELGFAQGWPSKLPEDADMLVILGPTVPFSKEAKEELTKFVLEK NGKVLITMEPKGSEDFTWLLQSAGLKFKSTPLVEREEKPGFVVAKRFPDNRLTDLLQKKDMGILFPYSGFLESEPNAPTP YVWKSETLLESGFDAYQDENKNGKLDPNEKKESKILSVVLSPMSLTGDKLGKIILHTGTTWITDQFIPYVMNSQFSTVSI TGLFQDNIVAEIPLKKEEVDTISLSDNQKLVAWVIGVFLFPGFILAVGSYFVYTRRKHSMLEV
Specific function: Unknown
COG id: COG3225
COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69796; Mature: 69796
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSADRVLPFVSLVSLFAYFLFDGMVVDPKRKILFLGVVFLFLASDTIVRAFSKGIRKE CCCCCHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DQNRYIAAVFGIAAFLLSVLRDFLDLKPVAGFNEEVSSIPKIREFLLLCVVLFSLVFLLQ CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IILLEIGKSSLEAQSNLAKSKSSLLQNAVLGFLFVLPILVAVNYFAIKRNYNFDLSSQGK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCC FSLSQISRNLIKPITEDVTITAFYPRPLEADGPANGDKLAAFALTRVRPDIEILLDQIKS EEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCC ENAHITVQFINADVEMDLLRDFGQVSNGTIFVRSKKQSSLTSTTPFAEERVIAKEPKDLE CCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHCCHHHCCCCCHH DLERKLVGALLNVTTVQKKVYFTVANGERYGASFRALPNEQVNRFVSSLQFLNFKVAELG HHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHC FAQGWPSKLPEDADMLVILGPTVPFSKEAKEELTKFVLEKNGKVLITMEPKGSEDFTWLL CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH QSAGLKFKSTPLVEREEKPGFVVAKRFPDNRLTDLLQKKDMGILFPYSGFLESEPNAPTP HHCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC YVWKSETLLESGFDAYQDENKNGKLDPNEKKESKILSVVLSPMSLTGDKLGKIILHTGTT CEECCHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCHHHCEEEEECCCC WITDQFIPYVMNSQFSTVSITGLFQDNIVAEIPLKKEEVDTISLSDNQKLVAWVIGVFLF HHHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHH PGFILAVGSYFVYTRRKHSMLEV HHHHHHHHHHHHEECCCHHHCCC >Mature Secondary Structure MLLSADRVLPFVSLVSLFAYFLFDGMVVDPKRKILFLGVVFLFLASDTIVRAFSKGIRKE CCCCCHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DQNRYIAAVFGIAAFLLSVLRDFLDLKPVAGFNEEVSSIPKIREFLLLCVVLFSLVFLLQ CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IILLEIGKSSLEAQSNLAKSKSSLLQNAVLGFLFVLPILVAVNYFAIKRNYNFDLSSQGK HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCC FSLSQISRNLIKPITEDVTITAFYPRPLEADGPANGDKLAAFALTRVRPDIEILLDQIKS EEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCC ENAHITVQFINADVEMDLLRDFGQVSNGTIFVRSKKQSSLTSTTPFAEERVIAKEPKDLE CCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHCCHHHCCCCCHH DLERKLVGALLNVTTVQKKVYFTVANGERYGASFRALPNEQVNRFVSSLQFLNFKVAELG HHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHC FAQGWPSKLPEDADMLVILGPTVPFSKEAKEELTKFVLEKNGKVLITMEPKGSEDFTWLL CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH QSAGLKFKSTPLVEREEKPGFVVAKRFPDNRLTDLLQKKDMGILFPYSGFLESEPNAPTP HHCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC YVWKSETLLESGFDAYQDENKNGKLDPNEKKESKILSVVLSPMSLTGDKLGKIILHTGTT CEECCHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCHHHCEEEEECCCC WITDQFIPYVMNSQFSTVSITGLFQDNIVAEIPLKKEEVDTISLSDNQKLVAWVIGVFLF HHHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHH PGFILAVGSYFVYTRRKHSMLEV HHHHHHHHHHHHEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA