| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219923
Identifier: 183219923
GI number: 183219923
Start: 502781
End: 503512
Strand: Direct
Name: 183219923
Synonym: LEPBI_I0505
Alternate gene names: NA
Gene position: 502781-503512 (Clockwise)
Preceding gene: 183219922
Following gene: 183219924
Centisome position: 13.97
GC content: 37.57
Gene sequence:
>732_bases ATGAACTGGCAAACGGCTGTTTGGATCTATAAAAAAGAATTACGATTATTTTTTGGAACCTATATGGGACCTCTTGTATT AGGTGGAACTGCGTTTTTAAATGCTCTCTTCGTAATGATCCTCAATTTTAATGGGACTGCCAATTACGAAATAGCAACTT ACATCACCTTCATCTCGTTTATGACAACCATCCTCATTGCGATGGTCATCATATCCATGGGTTCGATTGTGGAAGAACGT AATAAAGGTACTTTGGAACTTCTATTCACCTCTCCCATCACCGATTTGGAAATTGTCTTCGGCAAATTTATGTTTGGTGT GACAGTTTGTGCCATCATCACTGTATTTATCAACGGACTTTTCCCACTTCTATTGTATGCATTTTGGAAAGCTCCGTTTT ATATGGTGGCATCGGGAAGTGTTGGTGTATTTTTACTTGGAATTTTTACCTTCACCATTGGCATGTTTGGTTCCAGTCTT GGGAAAAATCAAATGATATCACTTTTAATTTCTGTGCTTATCATTTTGACACTTTGGGTGGTTGGATATTTTTCTCATTT ATTCCAAGCAACTACAAGAAAGGTATTATTCCACTTACATATCTTTTCCCACTTTGCAGCCTTTGCCAAAGGTGTATTAC CATTAACAGGCATTGTATTTTTCCTAAGTGGAACTTTCCTATTTTTGTACTTAACCGTGAAGGTCTTGGAATCCAGGAGA TGGAGAGGGTAA
Upstream 100 bases:
>100_bases TCAAAGAATCTTTGTTTTCCAAAGCATTGTCTTCTGGAATTCAAATTGAATCATTAAAAAAACAAGAAGTGTCACTCGAA CAAATTTTTATGGAGAAAAT
Downstream 100 bases:
>100_bases ATCATGTTATTATCAGCTGATCGAGTTTTACCGTTTGTTAGTTTAGTTTCACTTTTCGCCTATTTCTTGTTTGATGGAAT GGTCGTAGATCCGAAACGAA
Product: ABC transporter permease
Products: NA
Alternate protein names: ABC Transporter Permease; ABC Transporter Permease Protein; Protein Involved In Gliding Motility Gldf; ABC-2 Type Transport System Permease Protein; Membrane Spanning Protein; ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease; Gliding Motility Protein GldF; ABC-2 Type Transporter Superfamily Protein; ABC-Type Transport System Permease Protein; ABC Transporter Inner Membrane Protein; Multi-Copper Maturation ABC Transporter Permease
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MNWQTAVWIYKKELRLFFGTYMGPLVLGGTAFLNALFVMILNFNGTANYEIATYITFISFMTTILIAMVIISMGSIVEER NKGTLELLFTSPITDLEIVFGKFMFGVTVCAIITVFINGLFPLLLYAFWKAPFYMVASGSVGVFLLGIFTFTIGMFGSSL GKNQMISLLISVLIILTLWVVGYFSHLFQATTRKVLFHLHIFSHFAAFAKGVLPLTGIVFFLSGTFLFLYLTVKVLESRR WRG
Sequences:
>Translated_243_residues MNWQTAVWIYKKELRLFFGTYMGPLVLGGTAFLNALFVMILNFNGTANYEIATYITFISFMTTILIAMVIISMGSIVEER NKGTLELLFTSPITDLEIVFGKFMFGVTVCAIITVFINGLFPLLLYAFWKAPFYMVASGSVGVFLLGIFTFTIGMFGSSL GKNQMISLLISVLIILTLWVVGYFSHLFQATTRKVLFHLHIFSHFAAFAKGVLPLTGIVFFLSGTFLFLYLTVKVLESRR WRG >Mature_243_residues MNWQTAVWIYKKELRLFFGTYMGPLVLGGTAFLNALFVMILNFNGTANYEIATYITFISFMTTILIAMVIISMGSIVEER NKGTLELLFTSPITDLEIVFGKFMFGVTVCAIITVFINGLFPLLLYAFWKAPFYMVASGSVGVFLLGIFTFTIGMFGSSL GKNQMISLLISVLIILTLWVVGYFSHLFQATTRKVLFHLHIFSHFAAFAKGVLPLTGIVFFLSGTFLFLYLTVKVLESRR WRG
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27347; Mature: 27347
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWQTAVWIYKKELRLFFGTYMGPLVLGGTAFLNALFVMILNFNGTANYEIATYITFISF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH MTTILIAMVIISMGSIVEERNKGTLELLFTSPITDLEIVFGKFMFGVTVCAIITVFINGL HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FPLLLYAFWKAPFYMVASGSVGVFLLGIFTFTIGMFGSSLGKNQMISLLISVLIILTLWV HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VGYFSHLFQATTRKVLFHLHIFSHFAAFAKGVLPLTGIVFFLSGTFLFLYLTVKVLESRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WRG CCC >Mature Secondary Structure MNWQTAVWIYKKELRLFFGTYMGPLVLGGTAFLNALFVMILNFNGTANYEIATYITFISF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH MTTILIAMVIISMGSIVEERNKGTLELLFTSPITDLEIVFGKFMFGVTVCAIITVFINGL HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FPLLLYAFWKAPFYMVASGSVGVFLLGIFTFTIGMFGSSLGKNQMISLLISVLIILTLWV HHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VGYFSHLFQATTRKVLFHLHIFSHFAAFAKGVLPLTGIVFFLSGTFLFLYLTVKVLESRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WRG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA