| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is cheW [H]
Identifier: 183219900
GI number: 183219900
Start: 476657
End: 477133
Strand: Direct
Name: cheW [H]
Synonym: LEPBI_I0482
Alternate gene names: 183219900
Gene position: 476657-477133 (Clockwise)
Preceding gene: 183219899
Following gene: 183219901
Centisome position: 13.24
GC content: 42.35
Gene sequence:
>477_bases ATGGCAAAAGAAACATCCCAAGCAAACCAATTCATTCATGAACAATACATCATTTTCAATTTGGGCGATGAAGAATATGC CATCCCCATCACAATTGTAGAAGAAATTGTCAAAATCACAAACCTAATCCGTGTTCCACAATCAAAGAGTTACTTTGCAG GGATCATGGACATCCGAGGCAAAGTGGTTCGGATGATAGACCTTGCCAAACGTTTGAATATCAAAAATGTAAACGAAGCG GCAGACCGTGCGATTGTGATCAATGTCTCTGGCAAATCGATTGGAGTGATCGTGGACAAAGTGTCCCATGTCGTTCATTT CCCTGCCAACCAAGTCGACCCACCACCACCTTCGGTGAAAGGGATTTCTTCTCGTTACATCACAGGAGTCGGGAAAAAAG ACAACCGCTTCATTATCCTCATTGATATTGAAAAAATCCTGACAGTAGAAGAAATTACGGAACTGGCCACCGTTTAA
Upstream 100 bases:
>100_bases GATCTGTCTTAATGACAAAAGTGTTGTCATTTCTCAGTTTCGGTTCATATTTTTTCTACAACGGCTACGTCTATTTCTAG ACGTAGTAGTAGAAATTGAT
Downstream 100 bases:
>100_bases CTTTGGCAGATGAAATTTGTTTGAAGAAATACAATGATCATCTCTAAATTTTATTACCTACGAAAAAACTTATACTCGAT GGCAGAACTTGTTTTGGAAC
Product: putative chemotaxis protein CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MAKETSQANQFIHEQYIIFNLGDEEYAIPITIVEEIVKITNLIRVPQSKSYFAGIMDIRGKVVRMIDLAKRLNIKNVNEA ADRAIVINVSGKSIGVIVDKVSHVVHFPANQVDPPPPSVKGISSRYITGVGKKDNRFIILIDIEKILTVEEITELATV
Sequences:
>Translated_158_residues MAKETSQANQFIHEQYIIFNLGDEEYAIPITIVEEIVKITNLIRVPQSKSYFAGIMDIRGKVVRMIDLAKRLNIKNVNEA ADRAIVINVSGKSIGVIVDKVSHVVHFPANQVDPPPPSVKGISSRYITGVGKKDNRFIILIDIEKILTVEEITELATV >Mature_157_residues AKETSQANQFIHEQYIIFNLGDEEYAIPITIVEEIVKITNLIRVPQSKSYFAGIMDIRGKVVRMIDLAKRLNIKNVNEAA DRAIVINVSGKSIGVIVDKVSHVVHFPANQVDPPPPSVKGISSRYITGVGKKDNRFIILIDIEKILTVEEITELATV
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=156, Percent_Identity=32.6923076923077, Blast_Score=97, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 17596; Mature: 17465
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKETSQANQFIHEQYIIFNLGDEEYAIPITIVEEIVKITNLIRVPQSKSYFAGIMDIRG CCCCHHHHHHHHHHEEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KVVRMIDLAKRLNIKNVNEAADRAIVINVSGKSIGVIVDKVSHVVHFPANQVDPPPPSVK HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEHHHHHHHHHEECCCCCCCCCCCCCC GISSRYITGVGKKDNRFIILIDIEKILTVEEITELATV CCCCCEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHCC >Mature Secondary Structure AKETSQANQFIHEQYIIFNLGDEEYAIPITIVEEIVKITNLIRVPQSKSYFAGIMDIRG CCCHHHHHHHHHHEEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KVVRMIDLAKRLNIKNVNEAADRAIVINVSGKSIGVIVDKVSHVVHFPANQVDPPPPSVK HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEHHHHHHHHHEECCCCCCCCCCCCCC GISSRYITGVGKKDNRFIILIDIEKILTVEEITELATV CCCCCEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]