| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219899
Identifier: 183219899
GI number: 183219899
Start: 476055
End: 476636
Strand: Direct
Name: 183219899
Synonym: LEPBI_I0481
Alternate gene names: NA
Gene position: 476055-476636 (Clockwise)
Preceding gene: 183219898
Following gene: 183219900
Centisome position: 13.22
GC content: 45.53
Gene sequence:
>582_bases ATGTACGGAGCCACCGTGAAAAACGGAACTGTACAATCCGAGAAGGATATCACTTCTGGACGTGCCTACCCAGTCTTTCG AAAGATTTGGCCATTCCGCGAATACTTCAGTTCCCTCCCTGACAAAGACATGTTGGTTAGTATTGGCGGAGCGTATGAAA TTTACCCTCCGTTCCAACCAGAAGTATCCGAAAAAAAACGAAACGCACGTGGACCAATGGAGTCAGCACTCTTTCCCTCC ACGCGGTATGATTCCATCTTTGGGATTGTCCGTGAGACAAGGTTCCAACGTTGGAGAAGGGAACGAAGAGAGGCTAGAGA AGCGCGAGGATCGCTCTGGACACGTTTCAAACGTAGGGTCTGGGGAGATTTGCAAGATATCTGTCTCGGCGTCGGATTTG GATGTTTGGTCTATTATGTATATTATGATTATGTCGTATTAGGTCTCAGTCTGGGAATCTTAGGGATGGTCGCAGGACTT CTGGATTTTCTTGTGAGAAAACGATCTGTCTTAATGACAAAAGTGTTGTCATTTCTCAGTTTCGGTTCATATTTTTTCTA CAACGGCTACGTCTATTTCTAG
Upstream 100 bases:
>100_bases TACCATGGAAACACCTCTCGGGGATGTCCTGGAGGCTGAGTTTAATTTTCACGAACGACTCGTTCGTTTATCTGTCGAGA TCAAAGAAGAGAAAGGACGT
Downstream 100 bases:
>100_bases ACGTAGTAGTAGAAATTGATATGGCAAAAGAAACATCCCAAGCAAACCAATTCATTCATGAACAATACATCATTTTCAAT TTGGGCGATGAAGAATATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MYGATVKNGTVQSEKDITSGRAYPVFRKIWPFREYFSSLPDKDMLVSIGGAYEIYPPFQPEVSEKKRNARGPMESALFPS TRYDSIFGIVRETRFQRWRRERREAREARGSLWTRFKRRVWGDLQDICLGVGFGCLVYYVYYDYVVLGLSLGILGMVAGL LDFLVRKRSVLMTKVLSFLSFGSYFFYNGYVYF
Sequences:
>Translated_193_residues MYGATVKNGTVQSEKDITSGRAYPVFRKIWPFREYFSSLPDKDMLVSIGGAYEIYPPFQPEVSEKKRNARGPMESALFPS TRYDSIFGIVRETRFQRWRRERREAREARGSLWTRFKRRVWGDLQDICLGVGFGCLVYYVYYDYVVLGLSLGILGMVAGL LDFLVRKRSVLMTKVLSFLSFGSYFFYNGYVYF >Mature_193_residues MYGATVKNGTVQSEKDITSGRAYPVFRKIWPFREYFSSLPDKDMLVSIGGAYEIYPPFQPEVSEKKRNARGPMESALFPS TRYDSIFGIVRETRFQRWRRERREAREARGSLWTRFKRRVWGDLQDICLGVGFGCLVYYVYYDYVVLGLSLGILGMVAGL LDFLVRKRSVLMTKVLSFLSFGSYFFYNGYVYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22525; Mature: 22525
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGATVKNGTVQSEKDITSGRAYPVFRKIWPFREYFSSLPDKDMLVSIGGAYEIYPPFQP CCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCCC EVSEKKRNARGPMESALFPSTRYDSIFGIVRETRFQRWRRERREAREARGSLWTRFKRRV CHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGDLQDICLGVGFGCLVYYVYYDYVVLGLSLGILGMVAGLLDFLVRKRSVLMTKVLSFLS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGSYFFYNGYVYF HCCHHHCCCEEEC >Mature Secondary Structure MYGATVKNGTVQSEKDITSGRAYPVFRKIWPFREYFSSLPDKDMLVSIGGAYEIYPPFQP CCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCCC EVSEKKRNARGPMESALFPSTRYDSIFGIVRETRFQRWRRERREAREARGSLWTRFKRRV CHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGDLQDICLGVGFGCLVYYVYYDYVVLGLSLGILGMVAGLLDFLVRKRSVLMTKVLSFLS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGSYFFYNGYVYF HCCHHHCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA