| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is yhaI [C]
Identifier: 183219886
GI number: 183219886
Start: 463750
End: 464046
Strand: Direct
Name: yhaI [C]
Synonym: LEPBI_I0468
Alternate gene names: 183219886
Gene position: 463750-464046 (Clockwise)
Preceding gene: 183219884
Following gene: 183219890
Centisome position: 12.88
GC content: 39.73
Gene sequence:
>297_bases ATGGCTTTCCAAGATGCGATCAAAGTTTGTTTTCAAAAGTATATTGAGTTTAATGGCAAAGCGAAACGACCCGAGTTTTG GTATTGGGTAGCGTTTACATTTGTTGTCAGTTTTTTATTCAGTATGTTCCTTCCCATCATTGGAATGGTCTTCTCTCTGG CCGTTTTCCTTCCAAGTATCAGCGTAGCAGTGAGAAGATTACACGATGTAGGAATGAGTGGCTGGTGGCTACTCATTGGA CTTACGGGAATTGGTTTACTTGTTCTCATTTTCTTTTGGGCTCAAAAAGGAAAATAA
Upstream 100 bases:
>100_bases TTAGATTTAAAAAAATATCTTTTTTACTTTACTTTTTCGAAACAAATCATCTTATTTTGCCTGATTCAAGAATAGAAAAA GATAAGGTAGGTAAATTTAT
Downstream 100 bases:
>100_bases TTTCGATTTAAAGTTCTGTTTGGTATTTTCAATGTACAAATGTTTGTGCGTTAGGGACAAGTAGGGCTTGGTCACCTGCC ATTGTTAAATGGTGGGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MAFQDAIKVCFQKYIEFNGKAKRPEFWYWVAFTFVVSFLFSMFLPIIGMVFSLAVFLPSISVAVRRLHDVGMSGWWLLIG LTGIGLLVLIFFWAQKGK
Sequences:
>Translated_98_residues MAFQDAIKVCFQKYIEFNGKAKRPEFWYWVAFTFVVSFLFSMFLPIIGMVFSLAVFLPSISVAVRRLHDVGMSGWWLLIG LTGIGLLVLIFFWAQKGK >Mature_97_residues AFQDAIKVCFQKYIEFNGKAKRPEFWYWVAFTFVVSFLFSMFLPIIGMVFSLAVFLPSISVAVRRLHDVGMSGWWLLIGL TGIGLLVLIFFWAQKGK
Specific function: Unknown
COG id: COG3152
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789491, Length=96, Percent_Identity=36.4583333333333, Blast_Score=63, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11290; Mature: 11159
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFQDAIKVCFQKYIEFNGKAKRPEFWYWVAFTFVVSFLFSMFLPIIGMVFSLAVFLPSI CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVAVRRLHDVGMSGWWLLIGLTGIGLLVLIFFWAQKGK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFQDAIKVCFQKYIEFNGKAKRPEFWYWVAFTFVVSFLFSMFLPIIGMVFSLAVFLPSI CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVAVRRLHDVGMSGWWLLIGLTGIGLLVLIFFWAQKGK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA