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The map label for this gene is yoaH [H]

Identifier: 183219881

GI number: 183219881

Start: 457793

End: 459841

Strand: Direct

Name: yoaH [H]

Synonym: LEPBI_I0463

Alternate gene names: 183219881

Gene position: 457793-459841 (Clockwise)

Preceding gene: 183219880

Following gene: 183219882

Centisome position: 12.72

GC content: 35.29

Gene sequence:

>2049_bases
ATGAATTCTTATTTTTCAAATCTATCGATTCGACTTAGACTTTTCCTACTCCCAATTCCAATCCTTCTCTTTTTATTAGT
ACTACTGATTTTATTCATCCGTTCTCAAAACAAGGATATCGATTTCACTTCGAAAGAATTGAAAGGAATCCAAATCATAA
AACCCATTTACGCAGTTTACCAACGCGGTTTGACAAAACTGAAAATTGGCGAAGAAAACAGCCGTGATCTAAAACCTTTG
GTTCAAGATGGAACTTCCGCCATTCTCAGTTCAGATATTTTTCCAAAAGAATCAACATTAGTGAAAGATTGGAATGCTTA
CCTAAACCAAGAAAGTTTTGATCAAACGACCACTCACAATTTTTTAGTCAATACACAAGAGATTGCTCTCAAGATTGGGG
ACTATTCTCATTTAATCTTAGATCCTGAGTTAGATTCTTATTACCAAATGGAAATCGTATTGTTGCAAGTTCCAGAACTT
TGGCAAAATGTCGCCCTCTTAAAAGAAGTCATCCGCGAAGAATACTTAGGTGAAAATAAAGGGAGTGATCAATTTTCAAA
TACAAGCCATACAAAGGCCATCATCTCCATCCATGCAATCGAAACGATTTGTCTCAATATCACCAATTCAAATCAAAAAA
CGTTAGAAAGTTCTAAAAAATACCAAGAAAAAATAAATCAAAATATCAAGGAAGCAAACCAATCTTGTAAAAATTATGTA
GAATCATTAAATGAAGTTTTTTTAAAGAGAACAAAAAAACCTTCAACTTCCAATGATTTGTTCTCTGTCATTCACAAAGG
TACTTCGATCGGTGCTGGAATTCAAAATGCTTCAATCAATGTATTGGAAAGTTTAATCACAGATCGACTAACGGAACAAA
AGTGGCAAAGGATGGTGAATATTCTAATCGTCTTCGTTGCATTGAGTTTTTCCATTTTATTGATTCGTGTTATCGTTCGA
AGTATCAATCTACCATTGGAATCGGTATTAACAAAAATAGAGGAACTTTCCAGTGGCGATGCAGATTTAACGAAACAATT
ACCATTATTTGGAAAAAATGAAATTGGTAAAATTTCAGAATCGATCAATCACTTTTTGGTCCAATTGAATGATATTATGG
TTCAATTAAAGAAATCTGTTTCACAAGTAGATATCATATCCGACCAGTTGAAACATGATGCCATTTCTGTTTCAGACAAT
GCATCAGGACTCGCCTCTACCACGGAAGAATCTGCCGCTTCCTTAGAAGAATTATCTTCTTCGTTCGAAGTTATGTTTGG
ATCTATTGAAAATGAAACTAAAAACATAAAAAAAATTGCCGATGAAATACGAAATATTGAATATTCGATCGGCAATATTG
AAAAAGAACTTTGGCAACTATCATCCGACTCTGTTTTGTCGACTCAGTTAGCTGACAATGGAAATTTATCGATTCGTAGT
ACCGATCGTTCCATGGAAGAAATCCGTTTGGTAACCAAAGAGATATCAGGGATTGTTGGTTTCATCACAGATATCTCAGA
ACAAACCAATTTACTTGCTCTTAATGCTAGTATTGAAGCGGCAAGGGCAGGGGATGCAGGGAGAGGGTTTGCTGTCGTTG
CAGAAGAGATTTCCAAACTAGCAGACAAAACTCGTATTTCAGTGAAAAACATTATGACACTCATCACAAAAAGTGATACA
GCAGTGAGTGTTGGTGTGAATCATGTGAATGATACTGTAAAAGCATTGAATGAGATTGTGAGTCAATCAAGCCGAATCCA
AATGGGTGTTGAAAAGTTAAAGGGAGAAATGTCTTCTCAATCAAATAGTTTGACTAATGTATCAGATGAATTAAAAGAAC
TCCAGTTATTGGCTGAATCGATTGAAACGTCATGCCAAGAACAAAAAAGAACTTCTGATGATATGGTTGTGAGTGTGAAT
TCTCTTTCAGGAAGTGCACAGGAGCTTGCCATCAGTTCCGAAGACTTAAATCGAGTGAGTCTTACAATAAGTGATGTCGC
AAAAACAATTTCTAACATCGCCAATTCGTTTCAGACATCTGAACATTAA

Upstream 100 bases:

>100_bases
GGTCTCATTTTATAAATTTTCTAAGTATATTTTTTTTGATATTCTAATTTAAAAGATTAGGAAAGGATTCTTTATTTCTA
CGGAAGGACGTAGTAGACAT

Downstream 100 bases:

>100_bases
ATTCCCTAAATTTCTTTCTTGCCCTTCCAGAAATAAATTGCAAAAATGAAATCACATAGAAATGAATTCCACTACAAAAA
AAGATTATTGGGTGATCGGC

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MNSYFSNLSIRLRLFLLPIPILLFLLVLLILFIRSQNKDIDFTSKELKGIQIIKPIYAVYQRGLTKLKIGEENSRDLKPL
VQDGTSAILSSDIFPKESTLVKDWNAYLNQESFDQTTTHNFLVNTQEIALKIGDYSHLILDPELDSYYQMEIVLLQVPEL
WQNVALLKEVIREEYLGENKGSDQFSNTSHTKAIISIHAIETICLNITNSNQKTLESSKKYQEKINQNIKEANQSCKNYV
ESLNEVFLKRTKKPSTSNDLFSVIHKGTSIGAGIQNASINVLESLITDRLTEQKWQRMVNILIVFVALSFSILLIRVIVR
SINLPLESVLTKIEELSSGDADLTKQLPLFGKNEIGKISESINHFLVQLNDIMVQLKKSVSQVDIISDQLKHDAISVSDN
ASGLASTTEESAASLEELSSSFEVMFGSIENETKNIKKIADEIRNIEYSIGNIEKELWQLSSDSVLSTQLADNGNLSIRS
TDRSMEEIRLVTKEISGIVGFITDISEQTNLLALNASIEAARAGDAGRGFAVVAEEISKLADKTRISVKNIMTLITKSDT
AVSVGVNHVNDTVKALNEIVSQSSRIQMGVEKLKGEMSSQSNSLTNVSDELKELQLLAESIETSCQEQKRTSDDMVVSVN
SLSGSAQELAISSEDLNRVSLTISDVAKTISNIANSFQTSEH

Sequences:

>Translated_682_residues
MNSYFSNLSIRLRLFLLPIPILLFLLVLLILFIRSQNKDIDFTSKELKGIQIIKPIYAVYQRGLTKLKIGEENSRDLKPL
VQDGTSAILSSDIFPKESTLVKDWNAYLNQESFDQTTTHNFLVNTQEIALKIGDYSHLILDPELDSYYQMEIVLLQVPEL
WQNVALLKEVIREEYLGENKGSDQFSNTSHTKAIISIHAIETICLNITNSNQKTLESSKKYQEKINQNIKEANQSCKNYV
ESLNEVFLKRTKKPSTSNDLFSVIHKGTSIGAGIQNASINVLESLITDRLTEQKWQRMVNILIVFVALSFSILLIRVIVR
SINLPLESVLTKIEELSSGDADLTKQLPLFGKNEIGKISESINHFLVQLNDIMVQLKKSVSQVDIISDQLKHDAISVSDN
ASGLASTTEESAASLEELSSSFEVMFGSIENETKNIKKIADEIRNIEYSIGNIEKELWQLSSDSVLSTQLADNGNLSIRS
TDRSMEEIRLVTKEISGIVGFITDISEQTNLLALNASIEAARAGDAGRGFAVVAEEISKLADKTRISVKNIMTLITKSDT
AVSVGVNHVNDTVKALNEIVSQSSRIQMGVEKLKGEMSSQSNSLTNVSDELKELQLLAESIETSCQEQKRTSDDMVVSVN
SLSGSAQELAISSEDLNRVSLTISDVAKTISNIANSFQTSEH
>Mature_682_residues
MNSYFSNLSIRLRLFLLPIPILLFLLVLLILFIRSQNKDIDFTSKELKGIQIIKPIYAVYQRGLTKLKIGEENSRDLKPL
VQDGTSAILSSDIFPKESTLVKDWNAYLNQESFDQTTTHNFLVNTQEIALKIGDYSHLILDPELDSYYQMEIVLLQVPEL
WQNVALLKEVIREEYLGENKGSDQFSNTSHTKAIISIHAIETICLNITNSNQKTLESSKKYQEKINQNIKEANQSCKNYV
ESLNEVFLKRTKKPSTSNDLFSVIHKGTSIGAGIQNASINVLESLITDRLTEQKWQRMVNILIVFVALSFSILLIRVIVR
SINLPLESVLTKIEELSSGDADLTKQLPLFGKNEIGKISESINHFLVQLNDIMVQLKKSVSQVDIISDQLKHDAISVSDN
ASGLASTTEESAASLEELSSSFEVMFGSIENETKNIKKIADEIRNIEYSIGNIEKELWQLSSDSVLSTQLADNGNLSIRS
TDRSMEEIRLVTKEISGIVGFITDISEQTNLLALNASIEAARAGDAGRGFAVVAEEISKLADKTRISVKNIMTLITKSDT
AVSVGVNHVNDTVKALNEIVSQSSRIQMGVEKLKGEMSSQSNSLTNVSDELKELQLLAESIETSCQEQKRTSDDMVVSVN
SLSGSAQELAISSEDLNRVSLTISDVAKTISNIANSFQTSEH

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=440, Percent_Identity=27.7272727272727, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI2367378, Length=305, Percent_Identity=29.5081967213115, Blast_Score=122, Evalue=7e-29,
Organism=Escherichia coli, GI1788195, Length=285, Percent_Identity=31.2280701754386, Blast_Score=119, Evalue=9e-28,
Organism=Escherichia coli, GI1788194, Length=304, Percent_Identity=28.2894736842105, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1789453, Length=253, Percent_Identity=26.8774703557312, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007891
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF05227 CHASE3; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 75750; Mature: 75750

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSYFSNLSIRLRLFLLPIPILLFLLVLLILFIRSQNKDIDFTSKELKGIQIIKPIYAVY
CCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHH
QRGLTKLKIGEENSRDLKPLVQDGTSAILSSDIFPKESTLVKDWNAYLNQESFDQTTTHN
HCCCCEEECCCCCCCCHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
FLVNTQEIALKIGDYSHLILDPELDSYYQMEIVLLQVPELWQNVALLKEVIREEYLGENK
EEEEHHHHEEEECCCEEEEECCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCC
GSDQFSNTSHTKAIISIHAIETICLNITNSNQKTLESSKKYQEKINQNIKEANQSCKNYV
CCCCCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLNEVFLKRTKKPSTSNDLFSVIHKGTSIGAGIQNASINVLESLITDRLTEQKWQRMVN
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ILIVFVALSFSILLIRVIVRSINLPLESVLTKIEELSSGDADLTKQLPLFGKNEIGKISE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHH
SINHFLVQLNDIMVQLKKSVSQVDIISDQLKHDAISVSDNASGLASTTEESAASLEELSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHH
SFEVMFGSIENETKNIKKIADEIRNIEYSIGNIEKELWQLSSDSVLSTQLADNGNLSIRS
HHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEHHHCCCCCEEEEE
TDRSMEEIRLVTKEISGIVGFITDISEQTNLLALNASIEAARAGDAGRGFAVVAEEISKL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHH
ADKTRISVKNIMTLITKSDTAVSVGVNHVNDTVKALNEIVSQSSRIQMGVEKLKGEMSSQ
HHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
SNSLTNVSDELKELQLLAESIETSCQEQKRTSDDMVVSVNSLSGSAQELAISSEDLNRVS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHEECCCCCCHHE
LTISDVAKTISNIANSFQTSEH
EEHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSYFSNLSIRLRLFLLPIPILLFLLVLLILFIRSQNKDIDFTSKELKGIQIIKPIYAVY
CCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHH
QRGLTKLKIGEENSRDLKPLVQDGTSAILSSDIFPKESTLVKDWNAYLNQESFDQTTTHN
HCCCCEEECCCCCCCCHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
FLVNTQEIALKIGDYSHLILDPELDSYYQMEIVLLQVPELWQNVALLKEVIREEYLGENK
EEEEHHHHEEEECCCEEEEECCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCC
GSDQFSNTSHTKAIISIHAIETICLNITNSNQKTLESSKKYQEKINQNIKEANQSCKNYV
CCCCCCCCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLNEVFLKRTKKPSTSNDLFSVIHKGTSIGAGIQNASINVLESLITDRLTEQKWQRMVN
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ILIVFVALSFSILLIRVIVRSINLPLESVLTKIEELSSGDADLTKQLPLFGKNEIGKISE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHH
SINHFLVQLNDIMVQLKKSVSQVDIISDQLKHDAISVSDNASGLASTTEESAASLEELSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHH
SFEVMFGSIENETKNIKKIADEIRNIEYSIGNIEKELWQLSSDSVLSTQLADNGNLSIRS
HHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEHHHCCCCCEEEEE
TDRSMEEIRLVTKEISGIVGFITDISEQTNLLALNASIEAARAGDAGRGFAVVAEEISKL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHH
ADKTRISVKNIMTLITKSDTAVSVGVNHVNDTVKALNEIVSQSSRIQMGVEKLKGEMSSQ
HHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
SNSLTNVSDELKELQLLAESIETSCQEQKRTSDDMVVSVNSLSGSAQELAISSEDLNRVS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHEECCCCCCHHE
LTISDVAKTISNIANSFQTSEH
EEHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]