| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is bvgS [H]
Identifier: 183219846
GI number: 183219846
Start: 417524
End: 419656
Strand: Reverse
Name: bvgS [H]
Synonym: LEPBI_I0424
Alternate gene names: 183219846
Gene position: 419656-417524 (Counterclockwise)
Preceding gene: 183219847
Following gene: 183219843
Centisome position: 11.66
GC content: 35.96
Gene sequence:
>2133_bases TTGACTTCCTCCAATACTAAATTTCCAAAATATGATTTTCAAAATATTTTTCAATCATTGCCTGAACTATATATGCTTTT GGATTTGGATTTTTGTATCATTGATATCAGCGATGCGTATGCAAATGCGACGTTAATCAAAAGGGAAAATGTTGTCGGAC AGAATCTTTTTGAAGTATTCCCTGACAATCCAGAGGATCAATCCGCGGATGGTGTCAAACAACTTCGTTCCTCGCTTAAG CAAGTGCTTAACTACAAACGCACGAGCACAATGGCATTACAAAAATATGATATAACAAAGCCGGATGGAAGTGGATTTGA AGTTCGATATTGGAGTCCTAGAAATTCACCAGTTTTTAATTCCAATGGAGATTTAGTCTGTATTGTACATACGGCAGAAG ATGTTACGGATTTTGTATATTTAAAACAACAAAGAGTAGAACAGTCGGAACAAACAGATGAAATGACAGAGCGCATTTCA AAAATGGAATCCGAAGTGATTACCCGTGCAAAAGAAGTAATTGAAAAAAATGAAGCATTACTTAACAGCGAACAAAATTT ATCTATCACACTCAGTTCTATCGGCGATGCTGTTCTTGCTACGGATGAACATGGAATCATCAATCGATTAAATCCTGTTG CAGAATCTCTTATCGGTTGGACAGCAAAAGAAGCGATCGGTAAAAACGTAAACGAAGTATTACAATTAGTGTATGCATCC TCTGGTTTACCCAAAAGCATTCCCATCTTCGAAGTCATCTCTAACGGAACTGTCAAAGGAAGTAGCCAAGATGGAATTTT AATCCACCGCTATGGAAGAAAAATAAATATTTCTGATACATGTTCACCCATTCGAAATAAAAACGGTGAAATCATTGGAT CGATTTTAGTTTTTCGCGATATATCGGAAGAATTTGCTGCAAAAACATATCTGGAAAAGGCAAAAGAAAATGCAGAAATG GCAAACAAAGCAAAGGATTCTTTTCTCGCAACAATGAGCCATGAAATCCGTACACCACTTAGTGGGCTTATCGGTATGTT AGAGTTACTCTATCAAACTTCATTAAATGATGACCAAAAAAGTTTAGTGAATAATGCATTGGTTTCAGGCAACAGCTTAC TACGTATCCTTAGCGATATTCTTGATCTTTCAAAAATAGAAGAGGGAAAATTAGAATTATCACTTCAACCAACATCAATT AGTCGACTACTCTCCGAAGTAGCGACAACCTATTTACAAATCGCAAGTTCAAAAGGATTGACATTAAGTTATGCTGTGGA TGAAAAAATTACATCTGCGCATATATTGGATTCTTTACGTTTGTCTCAGATTATCAATAATTTTGTAAGCAATGGTATTA AATTTACATCGAAAGGAAGTATTCATATTTCAGCGAACTTAATTAAAAATATTGATACATTACAACAAATCCAATTTTCC GTCACTGATACAGGAATAGGCCTCAGCAAAACTGATCAATCAAAATTATTCCAGTCTTATACGCAGGCCACAGCTGACAC TGCTCGATTGTACGGTGGCACTGGACTTGGACTTGCTATCTGTATGAGATTGTCTGAACTGATGGACGGAAACATAACGA TTGATAGTTTACCAGGTTCTGGGTCTACATTTAGTATTACATTGTCGCTTCCCACAACGGAAATGGATACCAAAAACGAG AATTCAAAGGAAAATGCCCCAAAAACAATTGAACCAATTTTTTTTACAGAATTTGATCCTCCTCGAATATTAGCTGTTGA TGACAATTCAGTCAATTTAGAAATTATTTTACGCCAATTGAAAGTTTTTGGTCTGGAAGTCGATGGAGCTGATGATGGGG AAAAGGCTTTGCAGTTGTGGTTAAACAATAAATACGATCTCATCATAACCGATTGCCATATGCCCATAAAAGATGGTTAT ACATTAACCAAAGAGATCCGAAATATAGAAAAATCAAAATTTGAAAAACGAATACCGATTATCGGTTACACTGCCAATGC TTTGGTGGAAGAAAGAGAGTATTGTTTGTCCATAGGAATGGATGAGCTTTTGATCAAACCAGCTCGATTGTCAAATCTAA GAGAAACTCTTGTTAAATGGTTGCCAAATCAAATTCAATCGATTGACCAATAG
Upstream 100 bases:
>100_bases TTGATTGATCACTCTCTATTTTTATGTTCTACTATTCTAATTTGTTTTTTCAACTTTGTTTTAGAAAAAATCCTTTGATG ACAAAAAGCTAGGCTCGAAA
Downstream 100 bases:
>100_bases TATTTGGAAATCTACTGCATTTTAAATATCTCCATTTTGACTTAAGAGATTAAAAAGTTCCTGCACGGAATTTTGTAAGG TCACTTGGAACATCTACCTT
Product: putative two-component sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 710; Mature: 709
Protein sequence:
>710_residues MTSSNTKFPKYDFQNIFQSLPELYMLLDLDFCIIDISDAYANATLIKRENVVGQNLFEVFPDNPEDQSADGVKQLRSSLK QVLNYKRTSTMALQKYDITKPDGSGFEVRYWSPRNSPVFNSNGDLVCIVHTAEDVTDFVYLKQQRVEQSEQTDEMTERIS KMESEVITRAKEVIEKNEALLNSEQNLSITLSSIGDAVLATDEHGIINRLNPVAESLIGWTAKEAIGKNVNEVLQLVYAS SGLPKSIPIFEVISNGTVKGSSQDGILIHRYGRKINISDTCSPIRNKNGEIIGSILVFRDISEEFAAKTYLEKAKENAEM ANKAKDSFLATMSHEIRTPLSGLIGMLELLYQTSLNDDQKSLVNNALVSGNSLLRILSDILDLSKIEEGKLELSLQPTSI SRLLSEVATTYLQIASSKGLTLSYAVDEKITSAHILDSLRLSQIINNFVSNGIKFTSKGSIHISANLIKNIDTLQQIQFS VTDTGIGLSKTDQSKLFQSYTQATADTARLYGGTGLGLAICMRLSELMDGNITIDSLPGSGSTFSITLSLPTTEMDTKNE NSKENAPKTIEPIFFTEFDPPRILAVDDNSVNLEIILRQLKVFGLEVDGADDGEKALQLWLNNKYDLIITDCHMPIKDGY TLTKEIRNIEKSKFEKRIPIIGYTANALVEEREYCLSIGMDELLIKPARLSNLRETLVKWLPNQIQSIDQ
Sequences:
>Translated_710_residues MTSSNTKFPKYDFQNIFQSLPELYMLLDLDFCIIDISDAYANATLIKRENVVGQNLFEVFPDNPEDQSADGVKQLRSSLK QVLNYKRTSTMALQKYDITKPDGSGFEVRYWSPRNSPVFNSNGDLVCIVHTAEDVTDFVYLKQQRVEQSEQTDEMTERIS KMESEVITRAKEVIEKNEALLNSEQNLSITLSSIGDAVLATDEHGIINRLNPVAESLIGWTAKEAIGKNVNEVLQLVYAS SGLPKSIPIFEVISNGTVKGSSQDGILIHRYGRKINISDTCSPIRNKNGEIIGSILVFRDISEEFAAKTYLEKAKENAEM ANKAKDSFLATMSHEIRTPLSGLIGMLELLYQTSLNDDQKSLVNNALVSGNSLLRILSDILDLSKIEEGKLELSLQPTSI SRLLSEVATTYLQIASSKGLTLSYAVDEKITSAHILDSLRLSQIINNFVSNGIKFTSKGSIHISANLIKNIDTLQQIQFS VTDTGIGLSKTDQSKLFQSYTQATADTARLYGGTGLGLAICMRLSELMDGNITIDSLPGSGSTFSITLSLPTTEMDTKNE NSKENAPKTIEPIFFTEFDPPRILAVDDNSVNLEIILRQLKVFGLEVDGADDGEKALQLWLNNKYDLIITDCHMPIKDGY TLTKEIRNIEKSKFEKRIPIIGYTANALVEEREYCLSIGMDELLIKPARLSNLRETLVKWLPNQIQSIDQ >Mature_709_residues TSSNTKFPKYDFQNIFQSLPELYMLLDLDFCIIDISDAYANATLIKRENVVGQNLFEVFPDNPEDQSADGVKQLRSSLKQ VLNYKRTSTMALQKYDITKPDGSGFEVRYWSPRNSPVFNSNGDLVCIVHTAEDVTDFVYLKQQRVEQSEQTDEMTERISK MESEVITRAKEVIEKNEALLNSEQNLSITLSSIGDAVLATDEHGIINRLNPVAESLIGWTAKEAIGKNVNEVLQLVYASS GLPKSIPIFEVISNGTVKGSSQDGILIHRYGRKINISDTCSPIRNKNGEIIGSILVFRDISEEFAAKTYLEKAKENAEMA NKAKDSFLATMSHEIRTPLSGLIGMLELLYQTSLNDDQKSLVNNALVSGNSLLRILSDILDLSKIEEGKLELSLQPTSIS RLLSEVATTYLQIASSKGLTLSYAVDEKITSAHILDSLRLSQIINNFVSNGIKFTSKGSIHISANLIKNIDTLQQIQFSV TDTGIGLSKTDQSKLFQSYTQATADTARLYGGTGLGLAICMRLSELMDGNITIDSLPGSGSTFSITLSLPTTEMDTKNEN SKENAPKTIEPIFFTEFDPPRILAVDDNSVNLEIILRQLKVFGLEVDGADDGEKALQLWLNNKYDLIITDCHMPIKDGYT LTKEIRNIEKSKFEKRIPIIGYTANALVEEREYCLSIGMDELLIKPARLSNLRETLVKWLPNQIQSIDQ
Specific function: Member of the two-component regulatory system BvgS/BvgA. Phosphorylates BvgA via a four-step phosphorelay in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788713, Length=404, Percent_Identity=37.3762376237624, Blast_Score=225, Evalue=8e-60, Organism=Escherichia coli, GI48994928, Length=584, Percent_Identity=26.8835616438356, Blast_Score=197, Evalue=2e-51, Organism=Escherichia coli, GI1789149, Length=240, Percent_Identity=43.3333333333333, Blast_Score=182, Evalue=9e-47, Organism=Escherichia coli, GI145693157, Length=278, Percent_Identity=37.0503597122302, Blast_Score=168, Evalue=1e-42, Organism=Escherichia coli, GI87081816, Length=405, Percent_Identity=30.3703703703704, Blast_Score=153, Evalue=3e-38, Organism=Escherichia coli, GI1788549, Length=394, Percent_Identity=23.3502538071066, Blast_Score=109, Evalue=5e-25, Organism=Escherichia coli, GI1788393, Length=243, Percent_Identity=30.8641975308642, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1786600, Length=357, Percent_Identity=25.4901960784314, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1786912, Length=249, Percent_Identity=26.9076305220884, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1788381, Length=134, Percent_Identity=36.5671641791045, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790436, Length=276, Percent_Identity=26.0869565217391, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1786783, Length=225, Percent_Identity=23.5555555555556, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=104, Percent_Identity=37.5, Blast_Score=68, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6322000, Length=129, Percent_Identity=29.4573643410853, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00989 PAS; PF00072 Response_reg; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 78985; Mature: 78854
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSNTKFPKYDFQNIFQSLPELYMLLDLDFCIIDISDAYANATLIKRENVVGQNLFEVF CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCEEEEECCCHHHHHHHHHC PDNPEDQSADGVKQLRSSLKQVLNYKRTSTMALQKYDITKPDGSGFEVRYWSPRNSPVFN CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCCCCCEEEEEECCCCCCCCC SNGDLVCIVHTAEDVTDFVYLKQQRVEQSEQTDEMTERISKMESEVITRAKEVIEKNEAL CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNSEQNLSITLSSIGDAVLATDEHGIINRLNPVAESLIGWTAKEAIGKNVNEVLQLVYAS HCCCCCCEEEHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC SGLPKSIPIFEVISNGTVKGSSQDGILIHRYGRKINISDTCSPIRNKNGEIIGSILVFRD CCCCCCCCHHHHHCCCEECCCCCCCEEEEECCCEECCCCCCCHHHCCCCCEEEHHHHHHH ISEEFAAKTYLEKAKENAEMANKAKDSFLATMSHEIRTPLSGLIGMLELLYQTSLNDDQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH SLVNNALVSGNSLLRILSDILDLSKIEEGKLELSLQPTSISRLLSEVATTYLQIASSKGL HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCC TLSYAVDEKITSAHILDSLRLSQIINNFVSNGIKFTSKGSIHISANLIKNIDTLQQIQFS EEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHHHHHHEEE VTDTGIGLSKTDQSKLFQSYTQATADTARLYGGTGLGLAICMRLSELMDGNITIDSLPGS EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCC GSTFSITLSLPTTEMDTKNENSKENAPKTIEPIFFTEFDPPRILAVDDNSVNLEIILRQL CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHH KVFGLEVDGADDGEKALQLWLNNKYDLIITDCHMPIKDGYTLTKEIRNIEKSKFEKRIPI HHHEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCE IGYTANALVEEREYCLSIGMDELLIKPARLSNLRETLVKWLPNQIQSIDQ EEECHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure TSSNTKFPKYDFQNIFQSLPELYMLLDLDFCIIDISDAYANATLIKRENVVGQNLFEVF CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCEEEEECCCHHHHHHHHHC PDNPEDQSADGVKQLRSSLKQVLNYKRTSTMALQKYDITKPDGSGFEVRYWSPRNSPVFN CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHEEEEEECCCCCCCCEEEEEECCCCCCCCC SNGDLVCIVHTAEDVTDFVYLKQQRVEQSEQTDEMTERISKMESEVITRAKEVIEKNEAL CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNSEQNLSITLSSIGDAVLATDEHGIINRLNPVAESLIGWTAKEAIGKNVNEVLQLVYAS HCCCCCCEEEHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC SGLPKSIPIFEVISNGTVKGSSQDGILIHRYGRKINISDTCSPIRNKNGEIIGSILVFRD CCCCCCCCHHHHHCCCEECCCCCCCEEEEECCCEECCCCCCCHHHCCCCCEEEHHHHHHH ISEEFAAKTYLEKAKENAEMANKAKDSFLATMSHEIRTPLSGLIGMLELLYQTSLNDDQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHH SLVNNALVSGNSLLRILSDILDLSKIEEGKLELSLQPTSISRLLSEVATTYLQIASSKGL HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCC TLSYAVDEKITSAHILDSLRLSQIINNFVSNGIKFTSKGSIHISANLIKNIDTLQQIQFS EEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHHHHHHEEE VTDTGIGLSKTDQSKLFQSYTQATADTARLYGGTGLGLAICMRLSELMDGNITIDSLPGS EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCC GSTFSITLSLPTTEMDTKNENSKENAPKTIEPIFFTEFDPPRILAVDDNSVNLEIILRQL CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHH KVFGLEVDGADDGEKALQLWLNNKYDLIITDCHMPIKDGYTLTKEIRNIEKSKFEKRIPI HHHEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCE IGYTANALVEEREYCLSIGMDELLIKPARLSNLRETLVKWLPNQIQSIDQ EEECHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1791760; 12910271 [H]