| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219834
Identifier: 183219834
GI number: 183219834
Start: 408126
End: 409187
Strand: Direct
Name: 183219834
Synonym: LEPBI_I0412
Alternate gene names: NA
Gene position: 408126-409187 (Clockwise)
Preceding gene: 183219833
Following gene: 183219835
Centisome position: 11.34
GC content: 40.11
Gene sequence:
>1062_bases ATGGATTTAGTTTTACCTAAAATTTCCCGATTCGATTTTACCTTTATCATTGGGATTACGTTCCTCGCCAGTATGATGGC TGGGGTCACTGTGTTTTGGCCTTTACTCTTTATCCCAATGTTAACAGTGCATGGTTGGCTTTTTGGGTATGAACACTTAT GGTCTACGTATACGAGGTTACTCTTCCATCGAGATGATCGAAACAAGTTTTGGGCATTGGTATGGATTGTGCCACCAATT GTGTTTCTTTTCCTTATGGCGGTAGGTGCAAACTGGGGCATGAAAGGAATTTTACTTCTCTATTTCATGGGTCAATTGTA TCACACAGTGCGTCAAAGTTGGGGGATCACTCAATCTTACAGGCGTAAAGCGGGTGGTCTCCTTTGGGATTCGGAAATAT TATCTGAATTGACATTATGGTCTGTTCCTATCTGGGGTTTTCTTCATCGGTGTTCCCAAAGGCCTGATGAATTTCTTTTC CAAGAGTTCTGGCTTCCCCCTGTTCCTGATTTGATTGTACAAGCTGCGGGTGTGGTCACGATGATCCTTTGCTTTATTTG GGTTATGACTCGTATCACTGCATTTTGGCGAGGTGAATTTGCCATTGCTCATACATTATTCATGTTATCCCATTTTTTTG TTTTTTTTGTCGGTTATATTTTAATAGAAGAGTTGTGTTCTGGATGGTTACTTGTCAATGTTTGGCACAATGTCCAATAC ATTGTTTATGTTTGGGTATATAACCGCAATCGATTTGGTTCGGGAGTTGATCCGAAGGCAAAAGTTCTATCCTGGTTATC GCAACGGGGATATGGGTATACAATTCTTTACTTTCTGTTTACAATCGCACTCGCTTTGCCTATCTATTATTTACTACCAG AACTAGGTGGTACACTGGATGAATTGTTTAAAACACAATTGATACCAATGTCAGTGGTACTTACCATGTCACTGACATTC CATCATTATATCGTCGATGGAGTGATTTGGAAAAGAAAGCACAACTCAATAGACCATCTCTCATCTTCCGATCTTGAAAC TGAAACCATTCCAGTTCTATAA
Upstream 100 bases:
>100_bases AGTGATGGTGAAAAAAATGTTTGTACAGAACCTCCAAGATCTAAACTACCACCGGGTGTTGTGACCTAAATTCTATTAGG CATGGTCCATCCTATTTGTT
Downstream 100 bases:
>100_bases AATTGAACTCCCCGCGCCCCGGATAGAAGCGGAAATCCTTTGCGTAAGCAAAGATTGGAGCGGATAGCCGGAGATGGGCG CCCACCAAACAAATTGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MDLVLPKISRFDFTFIIGITFLASMMAGVTVFWPLLFIPMLTVHGWLFGYEHLWSTYTRLLFHRDDRNKFWALVWIVPPI VFLFLMAVGANWGMKGILLLYFMGQLYHTVRQSWGITQSYRRKAGGLLWDSEILSELTLWSVPIWGFLHRCSQRPDEFLF QEFWLPPVPDLIVQAAGVVTMILCFIWVMTRITAFWRGEFAIAHTLFMLSHFFVFFVGYILIEELCSGWLLVNVWHNVQY IVYVWVYNRNRFGSGVDPKAKVLSWLSQRGYGYTILYFLFTIALALPIYYLLPELGGTLDELFKTQLIPMSVVLTMSLTF HHYIVDGVIWKRKHNSIDHLSSSDLETETIPVL
Sequences:
>Translated_353_residues MDLVLPKISRFDFTFIIGITFLASMMAGVTVFWPLLFIPMLTVHGWLFGYEHLWSTYTRLLFHRDDRNKFWALVWIVPPI VFLFLMAVGANWGMKGILLLYFMGQLYHTVRQSWGITQSYRRKAGGLLWDSEILSELTLWSVPIWGFLHRCSQRPDEFLF QEFWLPPVPDLIVQAAGVVTMILCFIWVMTRITAFWRGEFAIAHTLFMLSHFFVFFVGYILIEELCSGWLLVNVWHNVQY IVYVWVYNRNRFGSGVDPKAKVLSWLSQRGYGYTILYFLFTIALALPIYYLLPELGGTLDELFKTQLIPMSVVLTMSLTF HHYIVDGVIWKRKHNSIDHLSSSDLETETIPVL >Mature_353_residues MDLVLPKISRFDFTFIIGITFLASMMAGVTVFWPLLFIPMLTVHGWLFGYEHLWSTYTRLLFHRDDRNKFWALVWIVPPI VFLFLMAVGANWGMKGILLLYFMGQLYHTVRQSWGITQSYRRKAGGLLWDSEILSELTLWSVPIWGFLHRCSQRPDEFLF QEFWLPPVPDLIVQAAGVVTMILCFIWVMTRITAFWRGEFAIAHTLFMLSHFFVFFVGYILIEELCSGWLLVNVWHNVQY IVYVWVYNRNRFGSGVDPKAKVLSWLSQRGYGYTILYFLFTIALALPIYYLLPELGGTLDELFKTQLIPMSVVLTMSLTF HHYIVDGVIWKRKHNSIDHLSSSDLETETIPVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41310; Mature: 41310
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLVLPKISRFDFTFIIGITFLASMMAGVTVFWPLLFIPMLTVHGWLFGYEHLWSTYTRL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFHRDDRNKFWALVWIVPPIVFLFLMAVGANWGMKGILLLYFMGQLYHTVRQSWGITQSY HHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH RRKAGGLLWDSEILSELTLWSVPIWGFLHRCSQRPDEFLFQEFWLPPVPDLIVQAAGVVT HHHHCCCEECHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHH MILCFIWVMTRITAFWRGEFAIAHTLFMLSHFFVFFVGYILIEELCSGWLLVNVWHNVQY HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEE IVYVWVYNRNRFGSGVDPKAKVLSWLSQRGYGYTILYFLFTIALALPIYYLLPELGGTLD EEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH ELFKTQLIPMSVVLTMSLTFHHYIVDGVIWKRKHNSIDHLSSSDLETETIPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDLVLPKISRFDFTFIIGITFLASMMAGVTVFWPLLFIPMLTVHGWLFGYEHLWSTYTRL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFHRDDRNKFWALVWIVPPIVFLFLMAVGANWGMKGILLLYFMGQLYHTVRQSWGITQSY HHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH RRKAGGLLWDSEILSELTLWSVPIWGFLHRCSQRPDEFLFQEFWLPPVPDLIVQAAGVVT HHHHCCCEECHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHH MILCFIWVMTRITAFWRGEFAIAHTLFMLSHFFVFFVGYILIEELCSGWLLVNVWHNVQY HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEE IVYVWVYNRNRFGSGVDPKAKVLSWLSQRGYGYTILYFLFTIALALPIYYLLPELGGTLD EEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH ELFKTQLIPMSVVLTMSLTFHHYIVDGVIWKRKHNSIDHLSSSDLETETIPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA