Click here to switch to the map view.

The map label for this gene is yyaP [H]

Identifier: 183219829

GI number: 183219829

Start: 405287

End: 405850

Strand: Reverse

Name: yyaP [H]

Synonym: LEPBI_I0407

Alternate gene names: 183219829

Gene position: 405850-405287 (Counterclockwise)

Preceding gene: 183219830

Following gene: 183219828

Centisome position: 11.27

GC content: 40.43

Gene sequence:

>564_bases
ATGAGAAAGGTTATCTTTGGGATCAATGCCTCAGCAGATGGATTTTTTGGTCATGCCGATATGAATGCGGATGAAGCATT
GCACGAATATTTCATGCAAATTTTACAAAATTCGAGTGAAATCCTTTATGGCCGAACCACGTACGAACTCATGGTTCCTT
TTTGGCCTGAAGTTGCGAAAAACCAATCCATGTCGCAACTTAGCAATGAGTTTGCGAAGGTCTTCACTTCTCTGGAAAAA
ATCTTATTTTCCCAAACCATAGCAAAAGTAGATGATCCCAATACAACTCTTGCCACAAGGCCTTTGGAAGAGGAAGTGGC
TCATCTCAAAAAACAACCAGGAAAGGATATTTGTATTGGAAGTTTAAGTCTTGCCTCACAACTTTCAAACTTCGGTTTGA
TTGATGAATATAGGATTGTGATCCATCCTGTAATCGTTGGAAAAGGCCCGCGACTCTTTTCGAATCATACCTTAGATAAA
ACACTTCGATTGGATTTGGTGAGTTCCAAAACCTTCCCTTCTGGTAACACCGCTCTCCATTACCAAACACGCAGAGAGAT
ATAA

Upstream 100 bases:

>100_bases
AATTGTTTCACGCCTTTGCCTATCTAAATTTTCCCAAACCACCTCCATTCTCAGGCAAATTGTACTTCCAAACCCAACCT
AACCTATTAGAAAAAGGCGA

Downstream 100 bases:

>100_bases
CATTGGAACCAACGAAAGAACACCATGATAAAATGGCTAAGATGACTTTTGCAAAAGTGTATCCACTATATGTAACCAAG
ATACAAAATAAGGGAAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRKVIFGINASADGFFGHADMNADEALHEYFMQILQNSSEILYGRTTYELMVPFWPEVAKNQSMSQLSNEFAKVFTSLEK
ILFSQTIAKVDDPNTTLATRPLEEEVAHLKKQPGKDICIGSLSLASQLSNFGLIDEYRIVIHPVIVGKGPRLFSNHTLDK
TLRLDLVSSKTFPSGNTALHYQTRREI

Sequences:

>Translated_187_residues
MRKVIFGINASADGFFGHADMNADEALHEYFMQILQNSSEILYGRTTYELMVPFWPEVAKNQSMSQLSNEFAKVFTSLEK
ILFSQTIAKVDDPNTTLATRPLEEEVAHLKKQPGKDICIGSLSLASQLSNFGLIDEYRIVIHPVIVGKGPRLFSNHTLDK
TLRLDLVSSKTFPSGNTALHYQTRREI
>Mature_187_residues
MRKVIFGINASADGFFGHADMNADEALHEYFMQILQNSSEILYGRTTYELMVPFWPEVAKNQSMSQLSNEFAKVFTSLEK
ILFSQTIAKVDDPNTTLATRPLEEEVAHLKKQPGKDICIGSLSLASQLSNFGLIDEYRIVIHPVIVGKGPRLFSNHTLDK
TLRLDLVSSKTFPSGNTALHYQTRREI

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywjB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 21050; Mature: 21050

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVIFGINASADGFFGHADMNADEALHEYFMQILQNSSEILYGRTTYELMVPFWPEVAK
CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCHHHHC
NQSMSQLSNEFAKVFTSLEKILFSQTIAKVDDPNTTLATRPLEEEVAHLKKQPGKDICIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCEEEE
SLSLASQLSNFGLIDEYRIVIHPVIVGKGPRLFSNHTLDKTLRLDLVSSKTFPSGNTALH
HHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHEEEEECCCCCCCCCCEEE
YQTRREI
EECCCCC
>Mature Secondary Structure
MRKVIFGINASADGFFGHADMNADEALHEYFMQILQNSSEILYGRTTYELMVPFWPEVAK
CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCHHHHC
NQSMSQLSNEFAKVFTSLEKILFSQTIAKVDDPNTTLATRPLEEEVAHLKKQPGKDICIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCEEEE
SLSLASQLSNFGLIDEYRIVIHPVIVGKGPRLFSNHTLDKTLRLDLVSSKTFPSGNTALH
HHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHEEEEECCCCCCCCCCEEE
YQTRREI
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]