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The map label for this gene is ykgB [H]

Identifier: 183219825

GI number: 183219825

Start: 401825

End: 402880

Strand: Direct

Name: ykgB [H]

Synonym: LEPBI_I0403

Alternate gene names: 183219825

Gene position: 401825-402880 (Clockwise)

Preceding gene: 183219824

Following gene: 183219832

Centisome position: 11.16

GC content: 38.45

Gene sequence:

>1056_bases
GTGCAAGGGATTGGAAATGGAAAAGTTTCGATCATTGCAACTTCTAGTGATGGACGGGCCCGGGCAGAAAGTAAGATCAC
CGTTTATTCTGGGTATGTGTATTCAACATTGAATCTTGCGAATCGAGTTGGTCATTTAACAATGGATGATGATACTGGCG
TTCTGACGGCGAATTTGACAACTGCTCTCCTTCCTATGAGTGATCCGAATGGAATCACAACAGACCCAGCTGGAAAATTT
TTATACACAGGAGATTTCCAAAGTGGAAACATATCCTTGTTTTCGATCAACCAAAGTACTGGAGAATTAACAGCAAACGG
AAATTTTCCCGCAGGGATCAATCCTCGAAATTTATTGGTGACTCCTGATGGTAAGTATTTGTATCTCGCTGCAGAAGGTT
CTCAATCCATTCGTACCTATTCAATCAATGGAGATGGCACTTTGAATTTTTTGAATTCGTTTCCAACGACCATTGGGCAT
TCACAAATTCAAATCTCCAGAGACGGAAATTATATTTTTTATTTAAGTCCAACTCTAACAGAACTCGTATCGTATCGAAT
TAATTATATTGATGGAGGTTTAACATTGGTAGGAACGAGTCCATCATTTGCAAATGATGGTTCAGGAAATGTTTCCACTC
ATCCCAATGGCAATTTTTTGTATGTGGGTTCCTATCCTTCCATGACCATTTTAAGTTTTGATCGTAATACTGGAAACATG
GGTCTGGTGGATTCGGTCGCTCATTCTATGGGGATCAATGGTTCTGCCATTCATCCAAATGGTCTCTTTTATTATACAGT
TAATATCAATCACGAATCAATTTCATGTTATCGGATCGACCCTAATACAGGAAAAATTTCCTTGTTTCAAACGATCAATG
GATTTGTTGGGAGTAGCTTACGTTTTCTTATCATTGATCCAACTGGTAGGTTTGCGTATCTAGCAGATAGTAATGGACAA
CTAAAACATTTTAGTATCAATCAAATGAATGGTGAACTCACATTAATTGGGTCTGTCAATCCAGGTGGTGTCCAATGGAA
TTTGGTGTTTTTATAA

Upstream 100 bases:

>100_bases
ATTATCCGCTCAATATTTTGCTTTTGGACAAAACATAAATTCTAGTTTCCAATGGTCAACTAGCGATCCGAATGTTGCCA
CAGTTGATGGCACAGGCTTT

Downstream 100 bases:

>100_bases
TAATGGTTTACTTTGTGATTCGAGACATTCGCAATTCGCCTTCCTTTGCAAATTGTTTGAACCAATCCATTTCTTAATCA
AATCGATCCATCAAATTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MQGIGNGKVSIIATSSDGRARAESKITVYSGYVYSTLNLANRVGHLTMDDDTGVLTANLTTALLPMSDPNGITTDPAGKF
LYTGDFQSGNISLFSINQSTGELTANGNFPAGINPRNLLVTPDGKYLYLAAEGSQSIRTYSINGDGTLNFLNSFPTTIGH
SQIQISRDGNYIFYLSPTLTELVSYRINYIDGGLTLVGTSPSFANDGSGNVSTHPNGNFLYVGSYPSMTILSFDRNTGNM
GLVDSVAHSMGINGSAIHPNGLFYYTVNINHESISCYRIDPNTGKISLFQTINGFVGSSLRFLIIDPTGRFAYLADSNGQ
LKHFSINQMNGELTLIGSVNPGGVQWNLVFL

Sequences:

>Translated_351_residues
MQGIGNGKVSIIATSSDGRARAESKITVYSGYVYSTLNLANRVGHLTMDDDTGVLTANLTTALLPMSDPNGITTDPAGKF
LYTGDFQSGNISLFSINQSTGELTANGNFPAGINPRNLLVTPDGKYLYLAAEGSQSIRTYSINGDGTLNFLNSFPTTIGH
SQIQISRDGNYIFYLSPTLTELVSYRINYIDGGLTLVGTSPSFANDGSGNVSTHPNGNFLYVGSYPSMTILSFDRNTGNM
GLVDSVAHSMGINGSAIHPNGLFYYTVNINHESISCYRIDPNTGKISLFQTINGFVGSSLRFLIIDPTGRFAYLADSNGQ
LKHFSINQMNGELTLIGSVNPGGVQWNLVFL
>Mature_351_residues
MQGIGNGKVSIIATSSDGRARAESKITVYSGYVYSTLNLANRVGHLTMDDDTGVLTANLTTALLPMSDPNGITTDPAGKF
LYTGDFQSGNISLFSINQSTGELTANGNFPAGINPRNLLVTPDGKYLYLAAEGSQSIRTYSINGDGTLNFLNSFPTTIGH
SQIQISRDGNYIFYLSPTLTELVSYRINYIDGGLTLVGTSPSFANDGSGNVSTHPNGNFLYVGSYPSMTILSFDRNTGNM
GLVDSVAHSMGINGSAIHPNGLFYYTVNINHESISCYRIDPNTGKISLFQTINGFVGSSLRFLIIDPTGRFAYLADSNGQ
LKHFSINQMNGELTLIGSVNPGGVQWNLVFL

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 37617; Mature: 37617

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGIGNGKVSIIATSSDGRARAESKITVYSGYVYSTLNLANRVGHLTMDDDTGVLTANLT
CCCCCCCEEEEEEECCCCCCCCCCEEEEEECEEEEEEEHHHHCCEEEECCCCCEEEEECE
TALLPMSDPNGITTDPAGKFLYTGDFQSGNISLFSINQSTGELTANGNFPAGINPRNLLV
EEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEE
TPDGKYLYLAAEGSQSIRTYSINGDGTLNFLNSFPTTIGHSQIQISRDGNYIFYLSPTLT
CCCCCEEEEEECCCCCEEEEEECCCCEEEEHHCCCCCCCCCEEEEEECCCEEEEECCHHH
ELVSYRINYIDGGLTLVGTSPSFANDGSGNVSTHPNGNFLYVGSYPSMTILSFDRNTGNM
HHHHEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCC
GLVDSVAHSMGINGSAIHPNGLFYYTVNINHESISCYRIDPNTGKISLFQTINGFVGSSL
CHHHHHHHHHCCCCCEECCCCEEEEEEEECCCEEEEEEECCCCCEEEEEEECCHHCCCCE
RFLIIDPTGRFAYLADSNGQLKHFSINQMNGELTLIGSVNPGGVQWNLVFL
EEEEECCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCCEEEEEEEC
>Mature Secondary Structure
MQGIGNGKVSIIATSSDGRARAESKITVYSGYVYSTLNLANRVGHLTMDDDTGVLTANLT
CCCCCCCEEEEEEECCCCCCCCCCEEEEEECEEEEEEEHHHHCCEEEECCCCCEEEEECE
TALLPMSDPNGITTDPAGKFLYTGDFQSGNISLFSINQSTGELTANGNFPAGINPRNLLV
EEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEE
TPDGKYLYLAAEGSQSIRTYSINGDGTLNFLNSFPTTIGHSQIQISRDGNYIFYLSPTLT
CCCCCEEEEEECCCCCEEEEEECCCCEEEEHHCCCCCCCCCEEEEEECCCEEEEECCHHH
ELVSYRINYIDGGLTLVGTSPSFANDGSGNVSTHPNGNFLYVGSYPSMTILSFDRNTGNM
HHHHEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCC
GLVDSVAHSMGINGSAIHPNGLFYYTVNINHESISCYRIDPNTGKISLFQTINGFVGSSL
CHHHHHHHHHCCCCCEECCCCEEEEEEEECCCEEEEEEECCCCCEEEEEEECCHHCCCCE
RFLIIDPTGRFAYLADSNGQLKHFSINQMNGELTLIGSVNPGGVQWNLVFL
EEEEECCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]