| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219797
Identifier: 183219797
GI number: 183219797
Start: 376208
End: 377887
Strand: Reverse
Name: 183219797
Synonym: LEPBI_I0374
Alternate gene names: NA
Gene position: 377887-376208 (Counterclockwise)
Preceding gene: 183219798
Following gene: 183219796
Centisome position: 10.5
GC content: 37.02
Gene sequence:
>1680_bases GTGATAAAATTTCATTCGACTGGCCTTTTTGGAAAAGGAAAACAAACTTTTATGAAACTAATCACTTCCTTCGTCGCTAT CCTAATCTTTTTGATTTCACCTCTTTTCGCAAATGAGATCAACATTAAGAATGCCTATTTGAAATACAATACAGGCTCCA ATTCTGTGATTTACTTAAATATTTCGAATCAATCAAACCAAGATGTAAAACTCATTCAAGCCAAATCTAACATTGCAGAT CGTGTCGAATTATATGATATGATGAGCACTGAATCTGGAAAGAAAATGGTTTTGGTCAGCGCGATCCCTGTTCCAAAAAA AACAAATGTTACATTATCTCCGAATGGGTATCATATTATGATCTTCGGAATCAAATCACCTTTAAAATTAAAAGAAATGA TTCCACTTCGATTGATTTTTGCTGATGGAAACGAATTGGATATTAAAATTCCAGTAGAAACAACTTCACCTAACGCAAAT CATTCACAACTAAATCCTAATCAAAATCAAAGTAACAAAAAAGAAGAAAATTCGAAAGAATTTCATACTAGAAGTGGAGA AGGATCCAATGGTAACGATACTTCTCTTACAAACGATTCTATGGAAGAAGATCACTCGACCCACGATCACCATGGAAATG AAGGAGATCATAACCACAATCGTGCGGATATGATTGGACCTGCTGGAATCATGAACCCTCATATCCACGAGAAAGGAAAA TGGATGATTGATTATCGTTATATGGGTATGAAAATGTGGGGATTACAATCAGGAACCAAAGGACAATCTGATTTAGGAAC ATTATATTTTCCTTATACAGATCCAACAGTTGCGATGCCCACAGGAAGCCTAATTACAAGCTCTCCCATCGGTACTACGA TTCCTATTCTATCTCAGAACAATTTCAATTATATGTCAGTCCCAACAGATATGGTGATGGAGATGAATATGGCAAGTGTC ATGACTTCTCTCTCTGACAAATGGATGATCATGTTTATGGTTCCTGTTATTAAAAATAGAATGACAATGCTCTCGAGTAA TTTTGATCGGGCGCCAATGAGTTCATCGGGGATTGGTGATGTGAGCTTCAGCGCGGCGTATCGCCTAATCAAAACAGAAC ACCAAAACTTTTTTACAGGTATGGGAATTTCGTTACCAACAGGTTCGATCGATGAAAGAGATAATATGCCGATGATGGGA AAACAAAAAGTGCCCTATAATATGCAACCAGGAACGGGAACGTATAACTTGTTACCTCAACTTTCTTATAATGGACAGTA TGATCGTTTCTCTTGGGGAATTTTATCACAAGCGAATTTGCGAATGGGAAAAAATGATAACAACTATAAGTTTGGAAATC GATATGAAATTTCCAGTTGGATTTCCTATCTTGTTTTTGATGAGATGTCCGTTTCCCTTCGAGTCGCCAAACAAAGATGG CTCAATTTACAAGGGTTAGATGCCACATTAGACCCTAAAATGGACCCACAAAATGATCCCTACAGGCAAGGTGGAATGAG AAGTGATTGGTTCGTCGGTATGAATTTTCTAGTCACCAAAGGAATGTTATCCGGTATTCGGTTTGGATTTGAATACGGAA GACCTTTTCACCAAAATTTAAATGGACCACAAATGACAACACGCGAACTTGTGAATGTCTTTGCTTCATTTACGTTTTAA
Upstream 100 bases:
>100_bases GGATTTGTATTAAATGGAGTCACAATCACTTCATTTACAATCGGATCTATCGTTTCCAATACAGAAATGTAAAAACGCTC TCCAAACACTTGTCAGTCGA
Downstream 100 bases:
>100_bases GATGAATTAAGGAAATTCTTTGGGCGCACATTTCCGGCTTTCCGCTCCAATCTTTGCCAAGGCAAAGGATTTCCGCTACA ATCCGGGGCGCAAAGGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MIKFHSTGLFGKGKQTFMKLITSFVAILIFLISPLFANEINIKNAYLKYNTGSNSVIYLNISNQSNQDVKLIQAKSNIAD RVELYDMMSTESGKKMVLVSAIPVPKKTNVTLSPNGYHIMIFGIKSPLKLKEMIPLRLIFADGNELDIKIPVETTSPNAN HSQLNPNQNQSNKKEENSKEFHTRSGEGSNGNDTSLTNDSMEEDHSTHDHHGNEGDHNHNRADMIGPAGIMNPHIHEKGK WMIDYRYMGMKMWGLQSGTKGQSDLGTLYFPYTDPTVAMPTGSLITSSPIGTTIPILSQNNFNYMSVPTDMVMEMNMASV MTSLSDKWMIMFMVPVIKNRMTMLSSNFDRAPMSSSGIGDVSFSAAYRLIKTEHQNFFTGMGISLPTGSIDERDNMPMMG KQKVPYNMQPGTGTYNLLPQLSYNGQYDRFSWGILSQANLRMGKNDNNYKFGNRYEISSWISYLVFDEMSVSLRVAKQRW LNLQGLDATLDPKMDPQNDPYRQGGMRSDWFVGMNFLVTKGMLSGIRFGFEYGRPFHQNLNGPQMTTRELVNVFASFTF
Sequences:
>Translated_559_residues MIKFHSTGLFGKGKQTFMKLITSFVAILIFLISPLFANEINIKNAYLKYNTGSNSVIYLNISNQSNQDVKLIQAKSNIAD RVELYDMMSTESGKKMVLVSAIPVPKKTNVTLSPNGYHIMIFGIKSPLKLKEMIPLRLIFADGNELDIKIPVETTSPNAN HSQLNPNQNQSNKKEENSKEFHTRSGEGSNGNDTSLTNDSMEEDHSTHDHHGNEGDHNHNRADMIGPAGIMNPHIHEKGK WMIDYRYMGMKMWGLQSGTKGQSDLGTLYFPYTDPTVAMPTGSLITSSPIGTTIPILSQNNFNYMSVPTDMVMEMNMASV MTSLSDKWMIMFMVPVIKNRMTMLSSNFDRAPMSSSGIGDVSFSAAYRLIKTEHQNFFTGMGISLPTGSIDERDNMPMMG KQKVPYNMQPGTGTYNLLPQLSYNGQYDRFSWGILSQANLRMGKNDNNYKFGNRYEISSWISYLVFDEMSVSLRVAKQRW LNLQGLDATLDPKMDPQNDPYRQGGMRSDWFVGMNFLVTKGMLSGIRFGFEYGRPFHQNLNGPQMTTRELVNVFASFTF >Mature_559_residues MIKFHSTGLFGKGKQTFMKLITSFVAILIFLISPLFANEINIKNAYLKYNTGSNSVIYLNISNQSNQDVKLIQAKSNIAD RVELYDMMSTESGKKMVLVSAIPVPKKTNVTLSPNGYHIMIFGIKSPLKLKEMIPLRLIFADGNELDIKIPVETTSPNAN HSQLNPNQNQSNKKEENSKEFHTRSGEGSNGNDTSLTNDSMEEDHSTHDHHGNEGDHNHNRADMIGPAGIMNPHIHEKGK WMIDYRYMGMKMWGLQSGTKGQSDLGTLYFPYTDPTVAMPTGSLITSSPIGTTIPILSQNNFNYMSVPTDMVMEMNMASV MTSLSDKWMIMFMVPVIKNRMTMLSSNFDRAPMSSSGIGDVSFSAAYRLIKTEHQNFFTGMGISLPTGSIDERDNMPMMG KQKVPYNMQPGTGTYNLLPQLSYNGQYDRFSWGILSQANLRMGKNDNNYKFGNRYEISSWISYLVFDEMSVSLRVAKQRW LNLQGLDATLDPKMDPQNDPYRQGGMRSDWFVGMNFLVTKGMLSGIRFGFEYGRPFHQNLNGPQMTTRELVNVFASFTF
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62985; Mature: 62985
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFHSTGLFGKGKQTFMKLITSFVAILIFLISPLFANEINIKNAYLKYNTGSNSVIYLN CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECEEEEEEEECCCCEEEEEE ISNQSNQDVKLIQAKSNIADRVELYDMMSTESGKKMVLVSAIPVPKKTNVTLSPNGYHIM ECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCEEE IFGIKSPLKLKEMIPLRLIFADGNELDIKIPVETTSPNANHSQLNPNQNQSNKKEENSKE EEECCCCCCHHHCCCEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCHH FHTRSGEGSNGNDTSLTNDSMEEDHSTHDHHGNEGDHNHNRADMIGPAGIMNPHIHEKGK HHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC WMIDYRYMGMKMWGLQSGTKGQSDLGTLYFPYTDPTVAMPTGSLITSSPIGTTIPILSQN EEEEEEEECEEEECCCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCCCCEEEEEECC NFNYMSVPTDMVMEMNMASVMTSLSDKWMIMFMVPVIKNRMTMLSSNFDRAPMSSSGIGD CCCEEECCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCC VSFSAAYRLIKTEHQNFFTGMGISLPTGSIDERDNMPMMGKQKVPYNMQPGTGTYNLLPQ CHHHHHHHHHHHCCCCCEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC LSYNGQYDRFSWGILSQANLRMGKNDNNYKFGNRYEISSWISYLVFDEMSVSLRVAKQRW CCCCCCCCCEEECEECCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHH LNLQGLDATLDPKMDPQNDPYRQGGMRSDWFVGMNFLVTKGMLSGIRFGFEYGRPFHQNL CCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC NGPQMTTRELVNVFASFTF CCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MIKFHSTGLFGKGKQTFMKLITSFVAILIFLISPLFANEINIKNAYLKYNTGSNSVIYLN CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECEEEEEEEECCCCEEEEEE ISNQSNQDVKLIQAKSNIADRVELYDMMSTESGKKMVLVSAIPVPKKTNVTLSPNGYHIM ECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCEEE IFGIKSPLKLKEMIPLRLIFADGNELDIKIPVETTSPNANHSQLNPNQNQSNKKEENSKE EEECCCCCCHHHCCCEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCHH FHTRSGEGSNGNDTSLTNDSMEEDHSTHDHHGNEGDHNHNRADMIGPAGIMNPHIHEKGK HHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC WMIDYRYMGMKMWGLQSGTKGQSDLGTLYFPYTDPTVAMPTGSLITSSPIGTTIPILSQN EEEEEEEECEEEECCCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCCCCEEEEEECC NFNYMSVPTDMVMEMNMASVMTSLSDKWMIMFMVPVIKNRMTMLSSNFDRAPMSSSGIGD CCCEEECCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCC VSFSAAYRLIKTEHQNFFTGMGISLPTGSIDERDNMPMMGKQKVPYNMQPGTGTYNLLPQ CHHHHHHHHHHHCCCCCEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC LSYNGQYDRFSWGILSQANLRMGKNDNNYKFGNRYEISSWISYLVFDEMSVSLRVAKQRW CCCCCCCCCEEECEECCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHH LNLQGLDATLDPKMDPQNDPYRQGGMRSDWFVGMNFLVTKGMLSGIRFGFEYGRPFHQNL CCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC NGPQMTTRELVNVFASFTF CCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA