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The map label for this gene is paiB [H]

Identifier: 183219788

GI number: 183219788

Start: 369846

End: 370457

Strand: Reverse

Name: paiB [H]

Synonym: LEPBI_I0365

Alternate gene names: 183219788

Gene position: 370457-369846 (Counterclockwise)

Preceding gene: 183219789

Following gene: 183219787

Centisome position: 10.29

GC content: 37.91

Gene sequence:

>612_bases
GTGTACATTCCTGAACCGTTTCAAATGGAAAGTTCTTCCGTGTTCCAATTTGTAAAAGAAAATTCCTTTGGAATTTTGGT
GTCCGAATTGGAAGGTAGTATGGTAGCCACTCATTTACCTCTTTTACTTTCTCCAGACCATCAATTTCTCATCGGTCATT
TTGCTAAACCAAATCCTCAAAAGGCTAGCATGAACCAGGAAGTTCTCTGTATCTTTCCTGGTCCCCATTGTTACATATCA
CCTTCTTGGTATGAAACCAATCGATCTGTTCCCACCTGGAATTATACTGCAGTTCACATCAAAGGTATATTAACATACAT
GCAAGATCCTATTCAAATCAAAGAAAGTTTGGAATTGTTAGTCAAAACCTTTGAAGCGAGTGAATCTACTTACCAACTCA
GCGAAGTCAATCAAGATTACTTGATGGGATTACAAAACGGAATTGTTCCGTTTCAAATCCAAATCACACATTGGGAAGGG
AAAACAAAACTCAGCCAAAATCATTCTGTGGAACGAAGGAAACGAGTGATTGAGAACCTAGAAAGAATGCCAGGTGACAA
TGAAAAAGCGATTGCCAATTTAATGAAACAATCCTTAGATCAGAAATCGTAA

Upstream 100 bases:

>100_bases
AAGATCCTTATATGAAAAGCAAGGTTTTGTGCAAGAAACAGAGTTTTTAACTTATTTTTGGAAATCAACATAAAACAAAT
TCATTAGCGAGGTAAATTGA

Downstream 100 bases:

>100_bases
GGTTTCAGTTCTCTCAAACCAAAGATAAATTTTTTTGTTCGCAACTTATAGACTGGGTTTAGTAAATATACTTTGAAACT
AGAATTAAATGTCAGAGTCA

Product: putative negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MYIPEPFQMESSSVFQFVKENSFGILVSELEGSMVATHLPLLLSPDHQFLIGHFAKPNPQKASMNQEVLCIFPGPHCYIS
PSWYETNRSVPTWNYTAVHIKGILTYMQDPIQIKESLELLVKTFEASESTYQLSEVNQDYLMGLQNGIVPFQIQITHWEG
KTKLSQNHSVERRKRVIENLERMPGDNEKAIANLMKQSLDQKS

Sequences:

>Translated_203_residues
MYIPEPFQMESSSVFQFVKENSFGILVSELEGSMVATHLPLLLSPDHQFLIGHFAKPNPQKASMNQEVLCIFPGPHCYIS
PSWYETNRSVPTWNYTAVHIKGILTYMQDPIQIKESLELLVKTFEASESTYQLSEVNQDYLMGLQNGIVPFQIQITHWEG
KTKLSQNHSVERRKRVIENLERMPGDNEKAIANLMKQSLDQKS
>Mature_203_residues
MYIPEPFQMESSSVFQFVKENSFGILVSELEGSMVATHLPLLLSPDHQFLIGHFAKPNPQKASMNQEVLCIFPGPHCYIS
PSWYETNRSVPTWNYTAVHIKGILTYMQDPIQIKESLELLVKTFEASESTYQLSEVNQDYLMGLQNGIVPFQIQITHWEG
KTKLSQNHSVERRKRVIENLERMPGDNEKAIANLMKQSLDQKS

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 23288; Mature: 23288

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIPEPFQMESSSVFQFVKENSFGILVSELEGSMVATHLPLLLSPDHQFLIGHFAKPNPQ
CCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEHHCCEEECCCCCEEEEECCCCCCC
KASMNQEVLCIFPGPHCYISPSWYETNRSVPTWNYTAVHIKGILTYMQDPIQIKESLELL
CCCCCCCEEEEECCCCEEECCCEEECCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHH
VKTFEASESTYQLSEVNQDYLMGLQNGIVPFQIQITHWEGKTKLSQNHSVERRKRVIENL
HHHHHCCCCEEEHHHCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
ERMPGDNEKAIANLMKQSLDQKS
HHCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYIPEPFQMESSSVFQFVKENSFGILVSELEGSMVATHLPLLLSPDHQFLIGHFAKPNPQ
CCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEHHCCEEECCCCCEEEEECCCCCCC
KASMNQEVLCIFPGPHCYISPSWYETNRSVPTWNYTAVHIKGILTYMQDPIQIKESLELL
CCCCCCCEEEEECCCCEEECCCEEECCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHH
VKTFEASESTYQLSEVNQDYLMGLQNGIVPFQIQITHWEGKTKLSQNHSVERRKRVIENL
HHHHHCCCCEEEHHHCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
ERMPGDNEKAIANLMKQSLDQKS
HHCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]