| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219786
Identifier: 183219786
GI number: 183219786
Start: 366911
End: 368104
Strand: Reverse
Name: 183219786
Synonym: LEPBI_I0363
Alternate gene names: NA
Gene position: 368104-366911 (Counterclockwise)
Preceding gene: 183219787
Following gene: 183219785
Centisome position: 10.23
GC content: 28.81
Gene sequence:
>1194_bases GTGGATATTGGACTTTTTGAAAATATATTTTATAATCTAATTCATACAGGTAAGGTTATCACCTCACTTGGACTAGATGG TAATTTACACCATTATTTTGCAGACCATATTAATTGGTTTATTTTTCCTATTAGTATCATTTATTATTTTTTTCCATATA TAGAAATTTTACTCATTTTACAAGCACTGATACTCAGTTTTCCCATTCTCATTTTTCCATACTTTGAAAATCAAAAATCG TATCATTTGATTTACCCGCTCCTTTATGCACTATTTTTACCAATTTATTGGATCCATATATTTGATTTTCATCCTGAAGT ATTATGGATTCCATTATTCTTTTTATTTTATCTTTTTTGGAAAAAACAATCCAAGATTTGGATTTTATTTTTTCTACTGA GTCTTTTGACTAAAGAAGAAACATCTTTTGTTTGGATTGTGTTTTCATATTTGCAACGAAAAATGTATCCGAAAGAAAGT TTGTTCATCACAATGATTTCAGTGATGTATTTTATAATCGCAATAGGACTTTTGATTCTTTTTCAAGATGAATTTCAAAC AAACTCACCAGCGCATTTAGAGAGATATAAAGACCCATTCACTGCTTTGAGTAATTTTCATTTGTTTCCATACCTTATCC TTTTTTTAAGTTTACCATTTTTATTTCTCAATTTTAAACATCAATTGATGTATTGTTTATTCCCCTATTTGATTTATTCA ATACTTTCAAAATTTGAAGTGAATAAAACTCCATTCACTCATCATAGTTTCATCACCATACCTATCGTTTTTTTGAGTTA TATTGAAATTGTAGAAAATCTAGATGAGAACCGAAAAAAAATCGTCTTAAGAATTTCGCTTCTAATTTCTATCTTCCTAT TTCTCTTTTATGGACCTATATCTAAATCATACTCTTATCGAAAAGAATTCATGAATCGAAGTGTATCAAATTCAGATTAT TTAACTCTTAGAAAATTATTACCAAATGAATCAATTGTTTCGAACATACCGCAATACCTTTCAAATCGAAAAGAAATTCA GCTGTATTTACCAAACCAAACTTACTCCGCTGATTATTATGTGCGTTATCGGTGGGGCAAAGAATCCTCAGATCAGAATC CGCCAAGCGACTACCAATTACAAAGTTTCGTGGAAAACCATATTCAAATCTTTATACGAAAGAAAATTGATTGA
Upstream 100 bases:
>100_bases TAGATTATGGAAGTATCTTCCATCATTTATTCTTTGGATACTTGTTTTCTATTTTCTTTCAGAGAGAGCCATCTTTCGTT ACCAACATATGGGAGCGGGA
Downstream 100 bases:
>100_bases TTCGATTTCAAAAATCATTACTCTAATAGTTCCAAAATGAAGTCCAATTTTTTACTAATTTTATTATTTTTATTGCTACA TTGTTCTACTGACCTTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MDIGLFENIFYNLIHTGKVITSLGLDGNLHHYFADHINWFIFPISIIYYFFPYIEILLILQALILSFPILIFPYFENQKS YHLIYPLLYALFLPIYWIHIFDFHPEVLWIPLFFLFYLFWKKQSKIWILFFLLSLLTKEETSFVWIVFSYLQRKMYPKES LFITMISVMYFIIAIGLLILFQDEFQTNSPAHLERYKDPFTALSNFHLFPYLILFLSLPFLFLNFKHQLMYCLFPYLIYS ILSKFEVNKTPFTHHSFITIPIVFLSYIEIVENLDENRKKIVLRISLLISIFLFLFYGPISKSYSYRKEFMNRSVSNSDY LTLRKLLPNESIVSNIPQYLSNRKEIQLYLPNQTYSADYYVRYRWGKESSDQNPPSDYQLQSFVENHIQIFIRKKID
Sequences:
>Translated_397_residues MDIGLFENIFYNLIHTGKVITSLGLDGNLHHYFADHINWFIFPISIIYYFFPYIEILLILQALILSFPILIFPYFENQKS YHLIYPLLYALFLPIYWIHIFDFHPEVLWIPLFFLFYLFWKKQSKIWILFFLLSLLTKEETSFVWIVFSYLQRKMYPKES LFITMISVMYFIIAIGLLILFQDEFQTNSPAHLERYKDPFTALSNFHLFPYLILFLSLPFLFLNFKHQLMYCLFPYLIYS ILSKFEVNKTPFTHHSFITIPIVFLSYIEIVENLDENRKKIVLRISLLISIFLFLFYGPISKSYSYRKEFMNRSVSNSDY LTLRKLLPNESIVSNIPQYLSNRKEIQLYLPNQTYSADYYVRYRWGKESSDQNPPSDYQLQSFVENHIQIFIRKKID >Mature_397_residues MDIGLFENIFYNLIHTGKVITSLGLDGNLHHYFADHINWFIFPISIIYYFFPYIEILLILQALILSFPILIFPYFENQKS YHLIYPLLYALFLPIYWIHIFDFHPEVLWIPLFFLFYLFWKKQSKIWILFFLLSLLTKEETSFVWIVFSYLQRKMYPKES LFITMISVMYFIIAIGLLILFQDEFQTNSPAHLERYKDPFTALSNFHLFPYLILFLSLPFLFLNFKHQLMYCLFPYLIYS ILSKFEVNKTPFTHHSFITIPIVFLSYIEIVENLDENRKKIVLRISLLISIFLFLFYGPISKSYSYRKEFMNRSVSNSDY LTLRKLLPNESIVSNIPQYLSNRKEIQLYLPNQTYSADYYVRYRWGKESSDQNPPSDYQLQSFVENHIQIFIRKKID
Specific function: Unknown
COG id: COG3463
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47976; Mature: 47976
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIGLFENIFYNLIHTGKVITSLGLDGNLHHYFADHINWFIFPISIIYYFFPYIEILLIL CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALILSFPILIFPYFENQKSYHLIYPLLYALFLPIYWIHIFDFHPEVLWIPLFFLFYLFW HHHHHHCHHHEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH KKQSKIWILFFLLSLLTKEETSFVWIVFSYLQRKMYPKESLFITMISVMYFIIAIGLLIL CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FQDEFQTNSPAHLERYKDPFTALSNFHLFPYLILFLSLPFLFLNFKHQLMYCLFPYLIYS HHHHHCCCCCHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSKFEVNKTPFTHHSFITIPIVFLSYIEIVENLDENRKKIVLRISLLISIFLFLFYGPI HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC SKSYSYRKEFMNRSVSNSDYLTLRKLLPNESIVSNIPQYLSNRKEIQLYLPNQTYSADYY CCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEE VRYRWGKESSDQNPPSDYQLQSFVENHIQIFIRKKID EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEECCC >Mature Secondary Structure MDIGLFENIFYNLIHTGKVITSLGLDGNLHHYFADHINWFIFPISIIYYFFPYIEILLIL CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALILSFPILIFPYFENQKSYHLIYPLLYALFLPIYWIHIFDFHPEVLWIPLFFLFYLFW HHHHHHCHHHEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH KKQSKIWILFFLLSLLTKEETSFVWIVFSYLQRKMYPKESLFITMISVMYFIIAIGLLIL CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FQDEFQTNSPAHLERYKDPFTALSNFHLFPYLILFLSLPFLFLNFKHQLMYCLFPYLIYS HHHHHCCCCCHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSKFEVNKTPFTHHSFITIPIVFLSYIEIVENLDENRKKIVLRISLLISIFLFLFYGPI HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC SKSYSYRKEFMNRSVSNSDYLTLRKLLPNESIVSNIPQYLSNRKEIQLYLPNQTYSADYY CCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEE VRYRWGKESSDQNPPSDYQLQSFVENHIQIFIRKKID EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA