| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183219755
Identifier: 183219755
GI number: 183219755
Start: 332125
End: 333816
Strand: Reverse
Name: 183219755
Synonym: LEPBI_I0331
Alternate gene names: NA
Gene position: 333816-332125 (Counterclockwise)
Preceding gene: 183219756
Following gene: 183219747
Centisome position: 9.27
GC content: 33.22
Gene sequence:
>1692_bases ATGAAATTAATTCAAAATTCCTTCGGGATCTTGATCTTATTGTCAGCTGTAGTTCTCGTGAACTGCAGCAAAAAAAAAGT AGAAAACTTCACTGTTCCCAAAAAAATATTTTTTATCGATACAAAAGATACAATTGATGTTTTACAAACAGAAGAACCAT TAGCTGAAAAAATTGGGACCATTAGTGACTCAGATTCCGTGCAAGTTCTTGCTCTAGTATCATTTGAAAAAAAAGATATG GTATACAAAACATACCAAATCAAATGCCCTACTTCAATCAAACATAAGTGTAAAACCGAATTTGGTTACATTCGAGCGTT TGATGTGGAAGGTGGTGGTTATACTTCTTCTTCCTCCGATTTCTCTGTTCTTCTCAAAAAGAAATTAATTGTATCAAATG AGGAATACACTGAAAGTAATCAATTAAAACAATTGATCCTTGAACCTAAATCAACTCTAAGTTCGATTACGATCAATCAC TTCAGTATTTTTCATTTCTTAATTCGTTCCTTGATGACAAAACCAGAGGATCAATTTCAAAAAATGGAAGAGGTGTACCA AATCCTAAAACTAGCAGAAAATCCTTCGAGAGAAGATCAATATGTTACCTCGCTTAAGAAAAAATACCCCTTTCTAAATG AAGTGAATGATTCAGGTGCCATTTCTTCTGTCACAACGAATAATGATTTCGAACAAAAATTAACTGAAGCAAGAAACGAA TTGATGAACTCATTCATCGCTGGATTCCCACTACGAGCTTCCACCTTTAAAGGATTAGTTGGACAATTCAATAAATTAAA AAACTTTCCTTATTTGTCTGAGAAAGTATTCGAATATCTCTCAAAGGAAGGAGTTTATTCTGTTTCTGGATTTGAAACTC AGTATTTAATCAATGCAGAATCAGGTTCTACGGCTCTGAACAAACTAAAAAAATTGGAACCTAATTTAGATCCAACGAAA ACACTTGGAATGTATCAGATCTTACATGACTCAGAAACCAATTACCAAATCAAAATTCAAATTTTGGATGGAATGGGAAA TGTAACAAAAGAGGAAAGTTATCCTATTGTTTCGATTTCTGCTGAAGAATCAGGAAATTCTTTAGGTTTTAAAATCAAAG CTGACAAACAAGATATGATTTTATCCCCTTTAGAAACAACACCTAATCTACTAATTGCAGGGGAAGGTTTCAAAGAATTT GTAAAAGCCATTCCAAATGATTACAAAGACATCATCAAAAACAATGATTACAATAAAGCAAAGTTGTTAATTGCTCTTAA ATTTGGTGAAGGTGGATTTGATGAAAAATTAGGTAAAATGGTTTATATCCTTTCTGCTTCCAAACGGTATTGGATTATGT TGGATTTGTTTCGCTTCAATCCAAATGTAAAACGATCTCATGATTATGACGGTACATTAGAGACTTCATTTTCTGTTGAT GAACACACTTGTATTTCCACAAGCAAATGGAGACAACCAAAGGGTGAATTGTACATCACAGGAATTGAAACGAGTTGTTA CTCAGATAGTGATGAAGAAATATCTCCAACGGAATCTATGTGTTTTTATGAGGGTGGTTCGATGTTCTATCAATTTGAAT TTTCACCATCGGAACTCAGATCCGATAAACCTTACGTAGAATTTAAATTTGAAAATTCTGGAGTCTGCCAAGCCATCCAA CATATCATGTAA
Upstream 100 bases:
>100_bases GAAGACTTCTGGTACCAAATCAAAACAAGTGATGGTAAAAAAGGATATTTATTCGGTGAATACATCCATGTAGTGGATAG TTATTAAAAGGTTCACCCAT
Downstream 100 bases:
>100_bases AAATGGTTTATTGATTACGAATGAAAAAACCAAAGAATCAGTTTTTGGTTTTTTCTTCTGTTTTTTCTTCCTCTTCTTTG CCACCAAAAATTGTCCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MKLIQNSFGILILLSAVVLVNCSKKKVENFTVPKKIFFIDTKDTIDVLQTEEPLAEKIGTISDSDSVQVLALVSFEKKDM VYKTYQIKCPTSIKHKCKTEFGYIRAFDVEGGGYTSSSSDFSVLLKKKLIVSNEEYTESNQLKQLILEPKSTLSSITINH FSIFHFLIRSLMTKPEDQFQKMEEVYQILKLAENPSREDQYVTSLKKKYPFLNEVNDSGAISSVTTNNDFEQKLTEARNE LMNSFIAGFPLRASTFKGLVGQFNKLKNFPYLSEKVFEYLSKEGVYSVSGFETQYLINAESGSTALNKLKKLEPNLDPTK TLGMYQILHDSETNYQIKIQILDGMGNVTKEESYPIVSISAEESGNSLGFKIKADKQDMILSPLETTPNLLIAGEGFKEF VKAIPNDYKDIIKNNDYNKAKLLIALKFGEGGFDEKLGKMVYILSASKRYWIMLDLFRFNPNVKRSHDYDGTLETSFSVD EHTCISTSKWRQPKGELYITGIETSCYSDSDEEISPTESMCFYEGGSMFYQFEFSPSELRSDKPYVEFKFENSGVCQAIQ HIM
Sequences:
>Translated_563_residues MKLIQNSFGILILLSAVVLVNCSKKKVENFTVPKKIFFIDTKDTIDVLQTEEPLAEKIGTISDSDSVQVLALVSFEKKDM VYKTYQIKCPTSIKHKCKTEFGYIRAFDVEGGGYTSSSSDFSVLLKKKLIVSNEEYTESNQLKQLILEPKSTLSSITINH FSIFHFLIRSLMTKPEDQFQKMEEVYQILKLAENPSREDQYVTSLKKKYPFLNEVNDSGAISSVTTNNDFEQKLTEARNE LMNSFIAGFPLRASTFKGLVGQFNKLKNFPYLSEKVFEYLSKEGVYSVSGFETQYLINAESGSTALNKLKKLEPNLDPTK TLGMYQILHDSETNYQIKIQILDGMGNVTKEESYPIVSISAEESGNSLGFKIKADKQDMILSPLETTPNLLIAGEGFKEF VKAIPNDYKDIIKNNDYNKAKLLIALKFGEGGFDEKLGKMVYILSASKRYWIMLDLFRFNPNVKRSHDYDGTLETSFSVD EHTCISTSKWRQPKGELYITGIETSCYSDSDEEISPTESMCFYEGGSMFYQFEFSPSELRSDKPYVEFKFENSGVCQAIQ HIM >Mature_563_residues MKLIQNSFGILILLSAVVLVNCSKKKVENFTVPKKIFFIDTKDTIDVLQTEEPLAEKIGTISDSDSVQVLALVSFEKKDM VYKTYQIKCPTSIKHKCKTEFGYIRAFDVEGGGYTSSSSDFSVLLKKKLIVSNEEYTESNQLKQLILEPKSTLSSITINH FSIFHFLIRSLMTKPEDQFQKMEEVYQILKLAENPSREDQYVTSLKKKYPFLNEVNDSGAISSVTTNNDFEQKLTEARNE LMNSFIAGFPLRASTFKGLVGQFNKLKNFPYLSEKVFEYLSKEGVYSVSGFETQYLINAESGSTALNKLKKLEPNLDPTK TLGMYQILHDSETNYQIKIQILDGMGNVTKEESYPIVSISAEESGNSLGFKIKADKQDMILSPLETTPNLLIAGEGFKEF VKAIPNDYKDIIKNNDYNKAKLLIALKFGEGGFDEKLGKMVYILSASKRYWIMLDLFRFNPNVKRSHDYDGTLETSFSVD EHTCISTSKWRQPKGELYITGIETSCYSDSDEEISPTESMCFYEGGSMFYQFEFSPSELRSDKPYVEFKFENSGVCQAIQ HIM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63985; Mature: 63985
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIQNSFGILILLSAVVLVNCSKKKVENFTVPKKIFFIDTKDTIDVLQTEEPLAEKIGT CCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEECCCHHHHHCCCCHHHHHHCC ISDSDSVQVLALVSFEKKDMVYKTYQIKCPTSIKHKCKTEFGYIRAFDVEGGGYTSSSSD CCCCCCEEEEEEEEECCCCEEEEEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCCC FSVLLKKKLIVSNEEYTESNQLKQLILEPKSTLSSITINHFSIFHFLIRSLMTKPEDQFQ HHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHEEHHHHHHHHHHHHHHHCCCHHHHH KMEEVYQILKLAENPSREDQYVTSLKKKYPFLNEVNDSGAISSVTTNNDFEQKLTEARNE HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCCCCCEEEEECCCHHHHHHHHHHHH LMNSFIAGFPLRASTFKGLVGQFNKLKNFPYLSEKVFEYLSKEGVYSVSGFETQYLINAE HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCEEEEEECC SGSTALNKLKKLEPNLDPTKTLGMYQILHDSETNYQIKIQILDGMGNVTKEESYPIVSIS CCCHHHHHHHHHCCCCCCHHHHHHHEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEE AEESGNSLGFKIKADKQDMILSPLETTPNLLIAGEGFKEFVKAIPNDYKDIIKNNDYNKA CCCCCCCEEEEEECCCCCCEECCCCCCCCEEEECCCHHHHHHHCCCCHHHHHCCCCCCCE KLLIALKFGEGGFDEKLGKMVYILSASKRYWIMLDLFRFNPNVKRSHDYDGTLETSFSVD EEEEEEEECCCCCHHHHCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCC EHTCISTSKWRQPKGELYITGIETSCYSDSDEEISPTESMCFYEGGSMFYQFEFSPSELR CCCCCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCHHHHC SDKPYVEFKFENSGVCQAIQHIM CCCCEEEEEECCCCHHHHHHHHC >Mature Secondary Structure MKLIQNSFGILILLSAVVLVNCSKKKVENFTVPKKIFFIDTKDTIDVLQTEEPLAEKIGT CCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEECCCHHHHHCCCCHHHHHHCC ISDSDSVQVLALVSFEKKDMVYKTYQIKCPTSIKHKCKTEFGYIRAFDVEGGGYTSSSSD CCCCCCEEEEEEEEECCCCEEEEEEEEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCCC FSVLLKKKLIVSNEEYTESNQLKQLILEPKSTLSSITINHFSIFHFLIRSLMTKPEDQFQ HHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHEEHHHHHHHHHHHHHHHCCCHHHHH KMEEVYQILKLAENPSREDQYVTSLKKKYPFLNEVNDSGAISSVTTNNDFEQKLTEARNE HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCCCCCCEEEEECCCHHHHHHHHHHHH LMNSFIAGFPLRASTFKGLVGQFNKLKNFPYLSEKVFEYLSKEGVYSVSGFETQYLINAE HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCEEEEEECC SGSTALNKLKKLEPNLDPTKTLGMYQILHDSETNYQIKIQILDGMGNVTKEESYPIVSIS CCCHHHHHHHHHCCCCCCHHHHHHHEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEE AEESGNSLGFKIKADKQDMILSPLETTPNLLIAGEGFKEFVKAIPNDYKDIIKNNDYNKA CCCCCCCEEEEEECCCCCCEECCCCCCCCEEEECCCHHHHHHHCCCCHHHHHCCCCCCCE KLLIALKFGEGGFDEKLGKMVYILSASKRYWIMLDLFRFNPNVKRSHDYDGTLETSFSVD EEEEEEEECCCCCHHHHCCEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCC EHTCISTSKWRQPKGELYITGIETSCYSDSDEEISPTESMCFYEGGSMFYQFEFSPSELR CCCCCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCHHHHC SDKPYVEFKFENSGVCQAIQHIM CCCCEEEEEECCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA