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The map label for this gene is dppC [H]

Identifier: 183219751

GI number: 183219751

Start: 326987

End: 328036

Strand: Direct

Name: dppC [H]

Synonym: LEPBI_I0327

Alternate gene names: 183219751

Gene position: 326987-328036 (Clockwise)

Preceding gene: 183219750

Following gene: 183219752

Centisome position: 9.08

GC content: 37.33

Gene sequence:

>1050_bases
ATGAAGTTTATATCAAATCCAGCAAACGTTCGTAAGTGGGAAAAATTCAAAAAGAATAAACGTGCCTATTATTCTATGTT
GGTACTATTTTATACATACCTACTTTCTTTATTTTCCCCCATTCTCATCAATAATAAACCACTTTTGGTCCTGTTCGAAG
GATCAGTCTCTTTTCCAATTGTTCAATTTTATCCAGAAACCAAATTTGGTGGCGTCAATTTAACGGAACCAAATTATAAA
AAACTAAATCGTGAACCAAGATTTCAAAATTCAAACAATCAAATGATTTTTCCTCCGATTCCTTTTGGTGTGAACGAAGA
CAATTTGGATAGTTTAGAGGAAGGCACCAATCCACCATCCAAACCCTCTCTTCGCCATTGGATGGGAACCGACGATCGTG
GCCGCGATGTTTTTACACGGATTGTGTATGGGTATCGATTAGCCATGACCTTTAGTTTGATTCTCATTGTTGTCGAGATT
CTTCTCGCATCATTTATCGGGGGAGTGCAGGGTTATTTTGTAGGTAGACTTGATTTGTTTTTACAAAGGATAATTGAAAT
TCTATCAGCGATTCCTTTTCTCTATCTAATTTTGATCATGGGTTCTTTTTTTGGAAGAGGGTTTATGGTTCTCATTGTTA
CCTATGGTTCCTTAAGTTGGATTGGTCTCAGTTATTATATGAGGGGAGAGTTTCTGAAACTCCGCAAACAGCAGTTTGTT
GATGCGGCAAAGACATTGGGTGCATCCTCTTATTCGATTATTATGAGGCATTTATTACCAAACTCTCTCACACCACTGGT
TACTTTTTTACCATTTATTTTGATTTCAGCTATATCTGTTTTATCTGCATTGGACTTTTTGGGATATGGAATCCCTGCTC
CCAATCCATCTTGGGGAGAACTCATTGGACAAGGGAGAGAAAGATTGACCGCTTGGTGGTTAATTACCTTTCCATCTGTT
GCATTGTTTTTAACAATTTTGTTTTCAGCTTTTGTTGGGGAAGGATTACGAGATGCCTTTGATCCAAAAGATAAGGTAGT
TTACGAATGA

Upstream 100 bases:

>100_bases
TAATGATGGGCTTATTACTTGCACAAAGTTTTTTAGGACTCATTGGTAAAATTGTCTCCGATTTTTGTTATATCATCATC
GATCCGAGGATTGATTTCGA

Downstream 100 bases:

>100_bases
ATTCCAAAGAGAAAGCCATCGAAGTAAAAGACTTAAGTATCCATATCAAAACTGACGATGGTGTTTTACCCATTGTGAGT
GGAATCAGCTTTCATTTAGA

Product: ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKFISNPANVRKWEKFKKNKRAYYSMLVLFYTYLLSLFSPILINNKPLLVLFEGSVSFPIVQFYPETKFGGVNLTEPNYK
KLNREPRFQNSNNQMIFPPIPFGVNEDNLDSLEEGTNPPSKPSLRHWMGTDDRGRDVFTRIVYGYRLAMTFSLILIVVEI
LLASFIGGVQGYFVGRLDLFLQRIIEILSAIPFLYLILIMGSFFGRGFMVLIVTYGSLSWIGLSYYMRGEFLKLRKQQFV
DAAKTLGASSYSIIMRHLLPNSLTPLVTFLPFILISAISVLSALDFLGYGIPAPNPSWGELIGQGRERLTAWWLITFPSV
ALFLTILFSAFVGEGLRDAFDPKDKVVYE

Sequences:

>Translated_349_residues
MKFISNPANVRKWEKFKKNKRAYYSMLVLFYTYLLSLFSPILINNKPLLVLFEGSVSFPIVQFYPETKFGGVNLTEPNYK
KLNREPRFQNSNNQMIFPPIPFGVNEDNLDSLEEGTNPPSKPSLRHWMGTDDRGRDVFTRIVYGYRLAMTFSLILIVVEI
LLASFIGGVQGYFVGRLDLFLQRIIEILSAIPFLYLILIMGSFFGRGFMVLIVTYGSLSWIGLSYYMRGEFLKLRKQQFV
DAAKTLGASSYSIIMRHLLPNSLTPLVTFLPFILISAISVLSALDFLGYGIPAPNPSWGELIGQGRERLTAWWLITFPSV
ALFLTILFSAFVGEGLRDAFDPKDKVVYE
>Mature_349_residues
MKFISNPANVRKWEKFKKNKRAYYSMLVLFYTYLLSLFSPILINNKPLLVLFEGSVSFPIVQFYPETKFGGVNLTEPNYK
KLNREPRFQNSNNQMIFPPIPFGVNEDNLDSLEEGTNPPSKPSLRHWMGTDDRGRDVFTRIVYGYRLAMTFSLILIVVEI
LLASFIGGVQGYFVGRLDLFLQRIIEILSAIPFLYLILIMGSFFGRGFMVLIVTYGSLSWIGLSYYMRGEFLKLRKQQFV
DAAKTLGASSYSIIMRHLLPNSLTPLVTFLPFILISAISVLSALDFLGYGIPAPNPSWGELIGQGRERLTAWWLITFPSV
ALFLTILFSAFVGEGLRDAFDPKDKVVYE

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4239

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=345, Percent_Identity=40.5797101449275, Blast_Score=263, Evalue=1e-71,
Organism=Escherichia coli, GI1787054, Length=242, Percent_Identity=31.8181818181818, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1787498, Length=230, Percent_Identity=33.9130434782609, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI1787760, Length=253, Percent_Identity=32.8063241106719, Blast_Score=144, Evalue=8e-36,
Organism=Escherichia coli, GI1789964, Length=227, Percent_Identity=33.920704845815, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1789889, Length=234, Percent_Identity=27.3504273504274, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1787549, Length=218, Percent_Identity=28.4403669724771, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 39766; Mature: 39766

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFISNPANVRKWEKFKKNKRAYYSMLVLFYTYLLSLFSPILINNKPLLVLFEGSVSFPI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCE
VQFYPETKFGGVNLTEPNYKKLNREPRFQNSNNQMIFPPIPFGVNEDNLDSLEEGTNPPS
EEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCC
KPSLRHWMGTDDRGRDVFTRIVYGYRLAMTFSLILIVVEILLASFIGGVQGYFVGRLDLF
CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQRIIEILSAIPFLYLILIMGSFFGRGFMVLIVTYGSLSWIGLSYYMRGEFLKLRKQQFV
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHH
DAAKTLGASSYSIIMRHLLPNSLTPLVTFLPFILISAISVLSALDFLGYGIPAPNPSWGE
HHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LIGQGRERLTAWWLITFPSVALFLTILFSAFVGEGLRDAFDPKDKVVYE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKFISNPANVRKWEKFKKNKRAYYSMLVLFYTYLLSLFSPILINNKPLLVLFEGSVSFPI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCE
VQFYPETKFGGVNLTEPNYKKLNREPRFQNSNNQMIFPPIPFGVNEDNLDSLEEGTNPPS
EEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCC
KPSLRHWMGTDDRGRDVFTRIVYGYRLAMTFSLILIVVEILLASFIGGVQGYFVGRLDLF
CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQRIIEILSAIPFLYLILIMGSFFGRGFMVLIVTYGSLSWIGLSYYMRGEFLKLRKQQFV
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHH
DAAKTLGASSYSIIMRHLLPNSLTPLVTFLPFILISAISVLSALDFLGYGIPAPNPSWGE
HHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LIGQGRERLTAWWLITFPSVALFLTILFSAFVGEGLRDAFDPKDKVVYE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]