| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183219742
Identifier: 183219742
GI number: 183219742
Start: 319019
End: 319597
Strand: Reverse
Name: 183219742
Synonym: LEPBI_I0318
Alternate gene names: NA
Gene position: 319597-319019 (Counterclockwise)
Preceding gene: 183219743
Following gene: 183219741
Centisome position: 8.88
GC content: 39.55
Gene sequence:
>579_bases ATGAAACAAATTCTATTCTCCTTTCTCTTAGTAGGATTCTTATTCCAATGCAGTAGCAGTCCCAAAAGACTCGACAATGC TGATGATTATATCTCCGACTCAGGTGGACTCACAAGCCAAGAATTGGTGAAAGCGGCCGAAAAATTAGCCGGTCAAATTG GGGAGTACTTCAAAGAAAACCCACATGAAGAAGGTGTTTTTGTGGCACACTTCCCTACGCGAAACGATACATCCGAACAA ATCCAAACGGAACTTTTTGACAATGCGTTTGTTTCCAAACTCATCAAAAACAAAATTTACACAGTCCGTACAAAAAACAG AGAACAATCACTCAACGAAATCCAGTTCAGCTTGTCTGGTCTCACATCCAATCGACTTTCCATTGGGAAACTCAAATCTC CTAACTTTTTTGTTCGATGTGACATCAATGAAAACATGTTCACTTCCAACGGTGAAAAAATTGTAGAACAGTCGATCAAC ATCGAACTTGTAGAAGTGGAAACTACCATTGCCGTTTGGTCAGAAAAAGTATCTTACCGAAAATTAGCAGTTCGAGGTAA TAAAGGGGTTAGTTGGTAA
Upstream 100 bases:
>100_bases AAGAGGAAAAAACTTTTTATCGCAGTTCTAAAATCGAGGAATTGAAATCGGATTTTTGGAATTGACAAGACATGTTTCGA TCCCCCATATAAATGAGGTT
Downstream 100 bases:
>100_bases TCCCTTCCATCATTGCATGAAAAAATCATTTCTCTTTCTTTTCCTTCTCATTCTCGGTTGTGCAAGTGATTACAACAAAA TCATCCAAGCAACCGAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKQILFSFLLVGFLFQCSSSPKRLDNADDYISDSGGLTSQELVKAAEKLAGQIGEYFKENPHEEGVFVAHFPTRNDTSEQ IQTELFDNAFVSKLIKNKIYTVRTKNREQSLNEIQFSLSGLTSNRLSIGKLKSPNFFVRCDINENMFTSNGEKIVEQSIN IELVEVETTIAVWSEKVSYRKLAVRGNKGVSW
Sequences:
>Translated_192_residues MKQILFSFLLVGFLFQCSSSPKRLDNADDYISDSGGLTSQELVKAAEKLAGQIGEYFKENPHEEGVFVAHFPTRNDTSEQ IQTELFDNAFVSKLIKNKIYTVRTKNREQSLNEIQFSLSGLTSNRLSIGKLKSPNFFVRCDINENMFTSNGEKIVEQSIN IELVEVETTIAVWSEKVSYRKLAVRGNKGVSW >Mature_192_residues MKQILFSFLLVGFLFQCSSSPKRLDNADDYISDSGGLTSQELVKAAEKLAGQIGEYFKENPHEEGVFVAHFPTRNDTSEQ IQTELFDNAFVSKLIKNKIYTVRTKNREQSLNEIQFSLSGLTSNRLSIGKLKSPNFFVRCDINENMFTSNGEKIVEQSIN IELVEVETTIAVWSEKVSYRKLAVRGNKGVSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21743; Mature: 21743
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQILFSFLLVGFLFQCSSSPKRLDNADDYISDSGGLTSQELVKAAEKLAGQIGEYFKEN CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PHEEGVFVAHFPTRNDTSEQIQTELFDNAFVSKLIKNKIYTVRTKNREQSLNEIQFSLSG CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHC LTSNRLSIGKLKSPNFFVRCDINENMFTSNGEKIVEQSINIELVEVETTIAVWSEKVSYR CCCCCEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEEHHHHHHHHHHHHHH KLAVRGNKGVSW HEEEECCCCCCC >Mature Secondary Structure MKQILFSFLLVGFLFQCSSSPKRLDNADDYISDSGGLTSQELVKAAEKLAGQIGEYFKEN CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PHEEGVFVAHFPTRNDTSEQIQTELFDNAFVSKLIKNKIYTVRTKNREQSLNEIQFSLSG CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHC LTSNRLSIGKLKSPNFFVRCDINENMFTSNGEKIVEQSINIELVEVETTIAVWSEKVSYR CCCCCEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEEHHHHHHHHHHHHHH KLAVRGNKGVSW HEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA