| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219712
Identifier: 183219712
GI number: 183219712
Start: 282338
End: 283990
Strand: Reverse
Name: 183219712
Synonym: LEPBI_I0288
Alternate gene names: NA
Gene position: 283990-282338 (Counterclockwise)
Preceding gene: 183219713
Following gene: 183219709
Centisome position: 7.89
GC content: 38.84
Gene sequence:
>1653_bases ATGAATTACAAACACCTTCTCCCTTCTACCTTTTTACTCTTCACCATCCTTACTTGTAAGTCAGCTTCCCTAAATAACTT ACAAGTCAATCTGCCTACAAACATTACGTTTCAATTCAAACTATCGGCAATCCCGAAAGAGTTAAATGGAGAATCCATTT CCTTTTTACTTCAATTTTATAAATGTGACAAACCAACAGCAAATGACTGTTATATTCCGATTTTAGAAAACAGTTATGAT CTAGGAAAAATTAAATCGAATGCGGCAAGTCTTAAAATCAATCAAACTCTCCCTAAGGATTGGACGCATCTCGCGATCAA AGTCCAAGGCATTGATATAGTTCATGGCAAGTTTTCTCCTGGCCATAATCCTTTTTGGTATTCTCCATCCGACATTTCTA CGTTAGGTGCAATTATTACAAAAGAATTTCGATTTGTGAGCCAAGAAAACAGAATTCCCAATCGAATCCAAGAGGAGATC GCCAAAAAGTTTGCCCCAATTCTTGTTTTTCACAAAGATAAAAAACACTTACCATCTAACATTGAAAAATATGCAGAACA TTTTGTTTCAAAAGAATATCCTTTGCCAGAAAAAGATCTTAGAAGAAAGTCAAAAGGCCAAACGACTTGGAATTATGTAG AATTTCCAGAACAAACTTACAAAGAAAACCCTACTCATTTGTATGCTCACGTTCGGTATGCAGAAACAAGAGTGTCGGGA ACACAAAAAGAAGCCCTTCCTGGTTTTCGCGATGATGCCAATTATTGGTATGAAGTAGGAAATGGTGATATGGTGGTGTC GTATTGGATTTGGTATGATTGGAATGAAGGCCCTACCAAATTTGGAAACATCCACCAAGGTGACTTAGAATCGTATGCAC TTCTCATTTCAAAAGAGGGAAAACCGAAACGGATTTTACTCACTGGTCACAACCATATTTTGTTAGATACAGACTTTCGG AATCTCAATTCTATCAAAAATCATCCCATACTCTATGTGGCCAAAGGGAATATGGGTGCGGATGGAGGAAATCCAACGTC AGCATATGGTGGTTATACGGTAAAATTAAATGCAGGAAACTTTCTGTTTAATTATATTTCTGACCCTTGGGATGTATTTC CAAGCTTTGATCCCAAAGAATCGATCTTAATTTTGCCTTCTGATCTTTCTGAAAAAGAACTCGCGGCTGTTACGATTGGT CCAGGGACAACGATCCAAAAGTCTCAATCGCAAACAGTCTTTCCAAAGGAAAAAATGGAAACTCCAGCTACTGGGGTAGA AATAAATCCCTTTCCCACCCAAATCGTAGACGCACGCAGTATGATCAAACAAAGGATCGAAAAAATTGTGATCTGGGAGG AACCAGGTTGGGTGAACCAAAAGGCAGTGATGGACCCTGATGGTCACCACAAAGTAGACAAATCAGTTGCCTCATTCTTT CAATTCCAAGGTAGACTTGGGAAACACCCAAGGACTGTCTTAAAAACATCGGAGCTCAAACAATTTGGAGAATCTCCGGA GAATGCTCCCTTCAAAACCAATATTGAACAACATTTTACATTTGAGCGCCCTCGGTTCGAACGAAACCATACCGACCGAG AGGGAAATTATGGACCAAAATTTATAGGCAATGATGCAACTCCTCAAAAATAG
Upstream 100 bases:
>100_bases GAAAGCTAAGAAAGACGCTGAATAATACTTTCTATCTTCCATTGGAAAAACCCCTGACACCAGGGGTTTTTTTATTTTTA AATTCTTTGTTCCACAAATT
Downstream 100 bases:
>100_bases TGAGTTGTGTATTCCTTTAATTCAGATTTAAATCAAATCTACTAACTTTGCTTTGGCGAGCTCTTCTGGTTTGAAAGGTT TTTCTTGTTGGATGTATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MNYKHLLPSTFLLFTILTCKSASLNNLQVNLPTNITFQFKLSAIPKELNGESISFLLQFYKCDKPTANDCYIPILENSYD LGKIKSNAASLKINQTLPKDWTHLAIKVQGIDIVHGKFSPGHNPFWYSPSDISTLGAIITKEFRFVSQENRIPNRIQEEI AKKFAPILVFHKDKKHLPSNIEKYAEHFVSKEYPLPEKDLRRKSKGQTTWNYVEFPEQTYKENPTHLYAHVRYAETRVSG TQKEALPGFRDDANYWYEVGNGDMVVSYWIWYDWNEGPTKFGNIHQGDLESYALLISKEGKPKRILLTGHNHILLDTDFR NLNSIKNHPILYVAKGNMGADGGNPTSAYGGYTVKLNAGNFLFNYISDPWDVFPSFDPKESILILPSDLSEKELAAVTIG PGTTIQKSQSQTVFPKEKMETPATGVEINPFPTQIVDARSMIKQRIEKIVIWEEPGWVNQKAVMDPDGHHKVDKSVASFF QFQGRLGKHPRTVLKTSELKQFGESPENAPFKTNIEQHFTFERPRFERNHTDREGNYGPKFIGNDATPQK
Sequences:
>Translated_550_residues MNYKHLLPSTFLLFTILTCKSASLNNLQVNLPTNITFQFKLSAIPKELNGESISFLLQFYKCDKPTANDCYIPILENSYD LGKIKSNAASLKINQTLPKDWTHLAIKVQGIDIVHGKFSPGHNPFWYSPSDISTLGAIITKEFRFVSQENRIPNRIQEEI AKKFAPILVFHKDKKHLPSNIEKYAEHFVSKEYPLPEKDLRRKSKGQTTWNYVEFPEQTYKENPTHLYAHVRYAETRVSG TQKEALPGFRDDANYWYEVGNGDMVVSYWIWYDWNEGPTKFGNIHQGDLESYALLISKEGKPKRILLTGHNHILLDTDFR NLNSIKNHPILYVAKGNMGADGGNPTSAYGGYTVKLNAGNFLFNYISDPWDVFPSFDPKESILILPSDLSEKELAAVTIG PGTTIQKSQSQTVFPKEKMETPATGVEINPFPTQIVDARSMIKQRIEKIVIWEEPGWVNQKAVMDPDGHHKVDKSVASFF QFQGRLGKHPRTVLKTSELKQFGESPENAPFKTNIEQHFTFERPRFERNHTDREGNYGPKFIGNDATPQK >Mature_550_residues MNYKHLLPSTFLLFTILTCKSASLNNLQVNLPTNITFQFKLSAIPKELNGESISFLLQFYKCDKPTANDCYIPILENSYD LGKIKSNAASLKINQTLPKDWTHLAIKVQGIDIVHGKFSPGHNPFWYSPSDISTLGAIITKEFRFVSQENRIPNRIQEEI AKKFAPILVFHKDKKHLPSNIEKYAEHFVSKEYPLPEKDLRRKSKGQTTWNYVEFPEQTYKENPTHLYAHVRYAETRVSG TQKEALPGFRDDANYWYEVGNGDMVVSYWIWYDWNEGPTKFGNIHQGDLESYALLISKEGKPKRILLTGHNHILLDTDFR NLNSIKNHPILYVAKGNMGADGGNPTSAYGGYTVKLNAGNFLFNYISDPWDVFPSFDPKESILILPSDLSEKELAAVTIG PGTTIQKSQSQTVFPKEKMETPATGVEINPFPTQIVDARSMIKQRIEKIVIWEEPGWVNQKAVMDPDGHHKVDKSVASFF QFQGRLGKHPRTVLKTSELKQFGESPENAPFKTNIEQHFTFERPRFERNHTDREGNYGPKFIGNDATPQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62792; Mature: 62792
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYKHLLPSTFLLFTILTCKSASLNNLQVNLPTNITFQFKLSAIPKELNGESISFLLQFY CCCHHHCHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHH KCDKPTANDCYIPILENSYDLGKIKSNAASLKINQTLPKDWTHLAIKVQGIDIVHGKFSP HCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEEECCCCC GHNPFWYSPSDISTLGAIITKEFRFVSQENRIPNRIQEEIAKKFAPILVFHKDKKHLPSN CCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHH IEKYAEHFVSKEYPLPEKDLRRKSKGQTTWNYVEFPEQTYKENPTHLYAHVRYAETRVSG HHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHCCCCCEEEEEEEEEHHHCCC TQKEALPGFRDDANYWYEVGNGDMVVSYWIWYDWNEGPTKFGNIHQGDLESYALLISKEG CHHHHCCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCC KPKRILLTGHNHILLDTDFRNLNSIKNHPILYVAKGNMGADGGNPTSAYGGYTVKLNAGN CCCEEEEECCCEEEEECCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCC FLFNYISDPWDVFPSFDPKESILILPSDLSEKELAAVTIGPGTTIQKSQSQTVFPKEKME EEEECCCCHHHCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCC TPATGVEINPFPTQIVDARSMIKQRIEKIVIWEEPGWVNQKAVMDPDGHHKVDKSVASFF CCCCCEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHH QFQGRLGKHPRTVLKTSELKQFGESPENAPFKTNIEQHFTFERPRFERNHTDREGNYGPK HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC FIGNDATPQK CCCCCCCCCC >Mature Secondary Structure MNYKHLLPSTFLLFTILTCKSASLNNLQVNLPTNITFQFKLSAIPKELNGESISFLLQFY CCCHHHCHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHH KCDKPTANDCYIPILENSYDLGKIKSNAASLKINQTLPKDWTHLAIKVQGIDIVHGKFSP HCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEEECCCCC GHNPFWYSPSDISTLGAIITKEFRFVSQENRIPNRIQEEIAKKFAPILVFHKDKKHLPSN CCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHH IEKYAEHFVSKEYPLPEKDLRRKSKGQTTWNYVEFPEQTYKENPTHLYAHVRYAETRVSG HHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHCCCCCEEEEEEEEEHHHCCC TQKEALPGFRDDANYWYEVGNGDMVVSYWIWYDWNEGPTKFGNIHQGDLESYALLISKEG CHHHHCCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCC KPKRILLTGHNHILLDTDFRNLNSIKNHPILYVAKGNMGADGGNPTSAYGGYTVKLNAGN CCCEEEEECCCEEEEECCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCC FLFNYISDPWDVFPSFDPKESILILPSDLSEKELAAVTIGPGTTIQKSQSQTVFPKEKME EEEECCCCHHHCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCC TPATGVEINPFPTQIVDARSMIKQRIEKIVIWEEPGWVNQKAVMDPDGHHKVDKSVASFF CCCCCEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHH QFQGRLGKHPRTVLKTSELKQFGESPENAPFKTNIEQHFTFERPRFERNHTDREGNYGPK HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC FIGNDATPQK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA