| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is aroH [H]
Identifier: 183219696
GI number: 183219696
Start: 265448
End: 266497
Strand: Reverse
Name: aroH [H]
Synonym: LEPBI_I0272
Alternate gene names: 183219696
Gene position: 266497-265448 (Counterclockwise)
Preceding gene: 183219697
Following gene: 183219692
Centisome position: 7.4
GC content: 41.9
Gene sequence:
>1050_bases ATGAAACCAACAGCAAACTTAAGAATATTAGAACAACATAGCCTCATCCCTCCTTCTGTCATCATGGAAGAGCTTCCCCT CACTGATGAAGCCTCTGACGTTGTGGTGAGAACCAGAAGTGAAATATCGGATATCATTCATGGGAAAGACGAGAAACGCA TGTTAGTTGTCGTTGGTCCATGTTCTGTTCACGACATTGGTGCCGTGATGGAATACGCTGAAAAATTAAAACCAAAAATC AAAGAATTTCAAAAAGAACTCCTCATTGTGATGCGAGTCTATTTTGAAAAACCTAGGACCACTGTGGGTTGGAAAGGACT CATCAATGATCCTGATTTAGATGGTTCGTTTCATATCAACAAAGGTTTACAACTCGCAAGGAAACTTTTACTCGACCTAA ATAAAATGGGAATCCCATGTGGAACAGAATTTTTAGATGTCATCTCTCCGCAATACATCGCAGACCTCGTGGCATGGGGT GCCATTGGAGCAAGGACAACAGAAAGCCAAGTCCACAGAGAATTGGCATCTGGGCTTTCCGCACCCATTGGTTTCAAAAA TGGAACGGATGGAAATGTACAAATTGCTGTTGATGCCATTCGTTCTGCAAGTTCCAGCCACCATTTCCTTTCTGTTACCA ACCAAGGAAGTAGTGCCATTTTTCGAACAGCAGGAAACAAAGACACACATGTGATTTTACGTGGTGGAAACAAAGGACCT AACTTTGATGAGGCGTCTGTCAATGACGTGGGATCTCAAATCGAAAAAGCTGGACTTCCCCCAAAAGTGATGGTGGATTG TTCTCATGGTAATAGCCAAAAAGATTTTCGAAAACAACCAGGTGTAGTGGATTCCGTTGCAGAACAATTTGCCAAAGGGA GCAAATACATTTTAGGTGTGATGATTGAAAGCCACTTAAAAGAAGGAAACCAATCCATTGATGCCAAACCTTTGACATAT GGACAATCCATCACCGATGCTTGTGTGTCTTGGGAAACAACAGTTCCAATGCTTGAAAAACTAGCAGAAGCCGCAAACAA ACGAAAATAA
Upstream 100 bases:
>100_bases GGATTTTGGCGCAAGCGGGATTTAAGTCTTACAAAAACGTAGCTGGCGGAACATTAGCCTATTCCGATTTAGTGGACCCA AACATGCAGAAGTATTAATT
Downstream 100 bases:
>100_bases ACCAATCTAACAAAGGATTGGTTCGATCCCAATCTCTTCCATAAGAGGGTGTCAAAACCCTCTCATTTCACTCTGACGAC GAGTTGATTTTTCTAATGGA
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKPTANLRILEQHSLIPPSVIMEELPLTDEASDVVVRTRSEISDIIHGKDEKRMLVVVGPCSVHDIGAVMEYAEKLKPKI KEFQKELLIVMRVYFEKPRTTVGWKGLINDPDLDGSFHINKGLQLARKLLLDLNKMGIPCGTEFLDVISPQYIADLVAWG AIGARTTESQVHRELASGLSAPIGFKNGTDGNVQIAVDAIRSASSSHHFLSVTNQGSSAIFRTAGNKDTHVILRGGNKGP NFDEASVNDVGSQIEKAGLPPKVMVDCSHGNSQKDFRKQPGVVDSVAEQFAKGSKYILGVMIESHLKEGNQSIDAKPLTY GQSITDACVSWETTVPMLEKLAEAANKRK
Sequences:
>Translated_349_residues MKPTANLRILEQHSLIPPSVIMEELPLTDEASDVVVRTRSEISDIIHGKDEKRMLVVVGPCSVHDIGAVMEYAEKLKPKI KEFQKELLIVMRVYFEKPRTTVGWKGLINDPDLDGSFHINKGLQLARKLLLDLNKMGIPCGTEFLDVISPQYIADLVAWG AIGARTTESQVHRELASGLSAPIGFKNGTDGNVQIAVDAIRSASSSHHFLSVTNQGSSAIFRTAGNKDTHVILRGGNKGP NFDEASVNDVGSQIEKAGLPPKVMVDCSHGNSQKDFRKQPGVVDSVAEQFAKGSKYILGVMIESHLKEGNQSIDAKPLTY GQSITDACVSWETTVPMLEKLAEAANKRK >Mature_349_residues MKPTANLRILEQHSLIPPSVIMEELPLTDEASDVVVRTRSEISDIIHGKDEKRMLVVVGPCSVHDIGAVMEYAEKLKPKI KEFQKELLIVMRVYFEKPRTTVGWKGLINDPDLDGSFHINKGLQLARKLLLDLNKMGIPCGTEFLDVISPQYIADLVAWG AIGARTTESQVHRELASGLSAPIGFKNGTDGNVQIAVDAIRSASSSHHFLSVTNQGSSAIFRTAGNKDTHVILRGGNKGP NFDEASVNDVGSQIEKAGLPPKVMVDCSHGNSQKDFRKQPGVVDSVAEQFAKGSKYILGVMIESHLKEGNQSIDAKPLTY GQSITDACVSWETTVPMLEKLAEAANKRK
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=345, Percent_Identity=57.9710144927536, Blast_Score=412, Evalue=1e-116, Organism=Escherichia coli, GI1787996, Length=349, Percent_Identity=51.8624641833811, Blast_Score=377, Evalue=1e-106, Organism=Escherichia coli, GI1788953, Length=343, Percent_Identity=52.1865889212828, Blast_Score=375, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6319726, Length=347, Percent_Identity=55.3314121037464, Blast_Score=385, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6320240, Length=356, Percent_Identity=50.2808988764045, Blast_Score=374, Evalue=1e-104,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38064; Mature: 38064
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTANLRILEQHSLIPPSVIMEELPLTDEASDVVVRTRSEISDIIHGKDEKRMLVVVGP CCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC CSVHDIGAVMEYAEKLKPKIKEFQKELLIVMRVYFEKPRTTVGWKGLINDPDLDGSFHIN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC KGLQLARKLLLDLNKMGIPCGTEFLDVISPQYIADLVAWGAIGARTTESQVHRELASGLS HHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC APIGFKNGTDGNVQIAVDAIRSASSSHHFLSVTNQGSSAIFRTAGNKDTHVILRGGNKGP CCCCCCCCCCCCEEEEEHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEECCCCCC NFDEASVNDVGSQIEKAGLPPKVMVDCSHGNSQKDFRKQPGVVDSVAEQFAKGSKYILGV CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEHHH MIESHLKEGNQSIDAKPLTYGQSITDACVSWETTVPMLEKLAEAANKRK HHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKPTANLRILEQHSLIPPSVIMEELPLTDEASDVVVRTRSEISDIIHGKDEKRMLVVVGP CCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC CSVHDIGAVMEYAEKLKPKIKEFQKELLIVMRVYFEKPRTTVGWKGLINDPDLDGSFHIN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC KGLQLARKLLLDLNKMGIPCGTEFLDVISPQYIADLVAWGAIGARTTESQVHRELASGLS HHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC APIGFKNGTDGNVQIAVDAIRSASSSHHFLSVTNQGSSAIFRTAGNKDTHVILRGGNKGP CCCCCCCCCCCCEEEEEHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEECCCCCC NFDEASVNDVGSQIEKAGLPPKVMVDCSHGNSQKDFRKQPGVVDSVAEQFAKGSKYILGV CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEHHH MIESHLKEGNQSIDAKPLTYGQSITDACVSWETTVPMLEKLAEAANKRK HHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]