Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183219610

Identifier: 183219610

GI number: 183219610

Start: 180313

End: 181863

Strand: Reverse

Name: 183219610

Synonym: LEPBI_I0185

Alternate gene names: NA

Gene position: 181863-180313 (Counterclockwise)

Preceding gene: 183219611

Following gene: 183219609

Centisome position: 5.05

GC content: 34.24

Gene sequence:

>1551_bases
ATGACAAACCGTAAGGAATATCATCCCAGTTTCGCGGTTGTTTATTTAGACAGCCCAACGCTTACATTTTTAGAATCAAA
TTTTGATGTGAATCTTGTTGATTCGTTTCTTAAAAAACTACATAAAGTATTTCCAAATATTAACATTCATATGAATGTTT
CGAAGCCAATAAAATCAATGTTAGAGGCTGGATCACAAACAAAGTTTTTTGAATTTTACGAATCCATACCTTCTGAAATT
GAATTCATCAAACAAATTGGAAGTTTGCTTCCTGAATCTGTATTCAAAGATCCAGAATGGGATGAAGTTTGTTTTTTATA
TTTTACCGGTATTTCTCCAATCTTAGATCCTAAACTTACAGAAAAAATTTGGAACCGTCATAAAAACTTTTTTAGCCAAT
ATTCTTATTCTGAAAATATTCCACCAGGACTCATTCCCACCGTCATCACTAGAGAATTTTTAACTTCGTTGCCAGACCAT
CTAACAACCGATATTCACTCATTTTTTCTAAAGAATATCAATCAATACGATGTGGATATTTTTTTCCAATCTCCTGATCT
GCGCCAATTACGATTGGATTTCCGTTTCAATTCCCCTCGTTCGAAAATGCTCATCCAAGGGTTACAAAAAATTGCGGAGG
ATGTTCCTTATGAGAACCTACTTTCAATTTTAAAACAAAACCCTGAATTGTATCGCAGTTTCCCATCATATTTAGAGTGG
GAGATTTATAAAGGATGCGAGCTCGCCTGTGTATTTTGTCCACGCGAGTTTATAGATAAATCAAATGATGGAAGTTTTGT
ATCGTTAGATGTTACAAAACAAATTATCAATCGATTCCAGAATGAATTAACCTCTCCTATCACCATTAGTTTGTCAGGAA
ATGGGGAACCACTTTTACATCCAAATTTTGTTGCCATAGTCAAAGAAATTCTCACACTTTCCCAACTCAAAGAACTCATC
ATTGAAACAGCTTTGTACAAAAATGTGGATCAGTTGTTTTCTCTCATCAATGATTTGGACCCAAAACTCAAAGAAAAACT
TTGTATCATAACCAATGTAACCACATTAAAAGAAGATACATACCAATCTTTGTATGGAAAAAATGAACTATCTCAAGTAT
TAGAATCAATTGACTCACTTTCGAAGATCCTTCCTCAAAATTCTCTTTATGTTCAAATGATTAAAATGAAAGAAGTGGAA
GATGAAATTGATCCTTACTTTACTTTTTTTGAGAAAAAAGGGATTCAAATCATCTTACAAAAATACAATCGTTTTGCTGG
GAAGTTGCCTGAACGAAGAGTGAGTGACCTTACACCGATTCATAGAGATTTTTGTTGGCACCTAATTCGTGATATTTACC
TTTCCGTATCTGGTGAAGTTTCTATTTGCAAACAAAACCAGACAGAAATGATCGGTAATCTTCTCTCTGAGTCTTTGTCT
GAAGTTTGGAAAAAAGGATTGGATTCGTTTCGCCATAGTTTCAACGGTGAACATGATTTAATCCCCGCTCCGTGTTTGAA
TTGTGATGAGTGGTACACCTTCAACGCATAA

Upstream 100 bases:

>100_bases
TCGTTGCCACTCGAAAAAATACATCCATTACCATCTTTGATCCAATTTATATCAAAGAACACAATATCAGTAACCCAGAA
GAGAAGTACAATTCAGATTA

Downstream 100 bases:

>100_bases
TAGTTTTGCCTTCATCCAGGCAAGACTTGGCTCCACAAGATTTCCTAAAAAAATTCTAAAACCAATACCAGAAGGTTCTA
ATTCTACATTTTTGGATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MTNRKEYHPSFAVVYLDSPTLTFLESNFDVNLVDSFLKKLHKVFPNINIHMNVSKPIKSMLEAGSQTKFFEFYESIPSEI
EFIKQIGSLLPESVFKDPEWDEVCFLYFTGISPILDPKLTEKIWNRHKNFFSQYSYSENIPPGLIPTVITREFLTSLPDH
LTTDIHSFFLKNINQYDVDIFFQSPDLRQLRLDFRFNSPRSKMLIQGLQKIAEDVPYENLLSILKQNPELYRSFPSYLEW
EIYKGCELACVFCPREFIDKSNDGSFVSLDVTKQIINRFQNELTSPITISLSGNGEPLLHPNFVAIVKEILTLSQLKELI
IETALYKNVDQLFSLINDLDPKLKEKLCIITNVTTLKEDTYQSLYGKNELSQVLESIDSLSKILPQNSLYVQMIKMKEVE
DEIDPYFTFFEKKGIQIILQKYNRFAGKLPERRVSDLTPIHRDFCWHLIRDIYLSVSGEVSICKQNQTEMIGNLLSESLS
EVWKKGLDSFRHSFNGEHDLIPAPCLNCDEWYTFNA

Sequences:

>Translated_516_residues
MTNRKEYHPSFAVVYLDSPTLTFLESNFDVNLVDSFLKKLHKVFPNINIHMNVSKPIKSMLEAGSQTKFFEFYESIPSEI
EFIKQIGSLLPESVFKDPEWDEVCFLYFTGISPILDPKLTEKIWNRHKNFFSQYSYSENIPPGLIPTVITREFLTSLPDH
LTTDIHSFFLKNINQYDVDIFFQSPDLRQLRLDFRFNSPRSKMLIQGLQKIAEDVPYENLLSILKQNPELYRSFPSYLEW
EIYKGCELACVFCPREFIDKSNDGSFVSLDVTKQIINRFQNELTSPITISLSGNGEPLLHPNFVAIVKEILTLSQLKELI
IETALYKNVDQLFSLINDLDPKLKEKLCIITNVTTLKEDTYQSLYGKNELSQVLESIDSLSKILPQNSLYVQMIKMKEVE
DEIDPYFTFFEKKGIQIILQKYNRFAGKLPERRVSDLTPIHRDFCWHLIRDIYLSVSGEVSICKQNQTEMIGNLLSESLS
EVWKKGLDSFRHSFNGEHDLIPAPCLNCDEWYTFNA
>Mature_515_residues
TNRKEYHPSFAVVYLDSPTLTFLESNFDVNLVDSFLKKLHKVFPNINIHMNVSKPIKSMLEAGSQTKFFEFYESIPSEIE
FIKQIGSLLPESVFKDPEWDEVCFLYFTGISPILDPKLTEKIWNRHKNFFSQYSYSENIPPGLIPTVITREFLTSLPDHL
TTDIHSFFLKNINQYDVDIFFQSPDLRQLRLDFRFNSPRSKMLIQGLQKIAEDVPYENLLSILKQNPELYRSFPSYLEWE
IYKGCELACVFCPREFIDKSNDGSFVSLDVTKQIINRFQNELTSPITISLSGNGEPLLHPNFVAIVKEILTLSQLKELII
ETALYKNVDQLFSLINDLDPKLKEKLCIITNVTTLKEDTYQSLYGKNELSQVLESIDSLSKILPQNSLYVQMIKMKEVED
EIDPYFTFFEKKGIQIILQKYNRFAGKLPERRVSDLTPIHRDFCWHLIRDIYLSVSGEVSICKQNQTEMIGNLLSESLSE
VWKKGLDSFRHSFNGEHDLIPAPCLNCDEWYTFNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60021; Mature: 59890

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRKEYHPSFAVVYLDSPTLTFLESNFDVNLVDSFLKKLHKVFPNINIHMNVSKPIKSM
CCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
LEAGSQTKFFEFYESIPSEIEFIKQIGSLLPESVFKDPEWDEVCFLYFTGISPILDPKLT
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEECCCHHCCHHHH
EKIWNRHKNFFSQYSYSENIPPGLIPTVITREFLTSLPDHLTTDIHSFFLKNINQYDVDI
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEE
FFQSPDLRQLRLDFRFNSPRSKMLIQGLQKIAEDVPYENLLSILKQNPELYRSFPSYLEW
EECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCHHHHCC
EIYKGCELACVFCPREFIDKSNDGSFVSLDVTKQIINRFQNELTSPITISLSGNGEPLLH
HHCCCCCEEEEECCHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
PNFVAIVKEILTLSQLKELIIETALYKNVDQLFSLINDLDPKLKEKLCIITNVTTLKEDT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHCEEHEECCHHHHHHH
YQSLYGKNELSQVLESIDSLSKILPQNSLYVQMIKMKEVEDEIDPYFTFFEKKGIQIILQ
HHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KYNRFAGKLPERRVSDLTPIHRDFCWHLIRDIYLSVSGEVSICKQNQTEMIGNLLSESLS
HHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHH
EVWKKGLDSFRHSFNGEHDLIPAPCLNCDEWYTFNA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
TNRKEYHPSFAVVYLDSPTLTFLESNFDVNLVDSFLKKLHKVFPNINIHMNVSKPIKSM
CCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
LEAGSQTKFFEFYESIPSEIEFIKQIGSLLPESVFKDPEWDEVCFLYFTGISPILDPKLT
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEEECCCHHCCHHHH
EKIWNRHKNFFSQYSYSENIPPGLIPTVITREFLTSLPDHLTTDIHSFFLKNINQYDVDI
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEE
FFQSPDLRQLRLDFRFNSPRSKMLIQGLQKIAEDVPYENLLSILKQNPELYRSFPSYLEW
EECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCHHHHCC
EIYKGCELACVFCPREFIDKSNDGSFVSLDVTKQIINRFQNELTSPITISLSGNGEPLLH
HHCCCCCEEEEECCHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
PNFVAIVKEILTLSQLKELIIETALYKNVDQLFSLINDLDPKLKEKLCIITNVTTLKEDT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHCEEHEECCHHHHHHH
YQSLYGKNELSQVLESIDSLSKILPQNSLYVQMIKMKEVEDEIDPYFTFFEKKGIQIILQ
HHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KYNRFAGKLPERRVSDLTPIHRDFCWHLIRDIYLSVSGEVSICKQNQTEMIGNLLSESLS
HHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHH
EVWKKGLDSFRHSFNGEHDLIPAPCLNCDEWYTFNA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]