| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680434
Identifier: 182680434
GI number: 182680434
Start: 4014793
End: 4015953
Strand: Reverse
Name: 182680434
Synonym: Bind_3534
Alternate gene names: NA
Gene position: 4015953-4014793 (Counterclockwise)
Preceding gene: 182680435
Following gene: 182680433
Centisome position: 96.3
GC content: 63.39
Gene sequence:
>1161_bases ATGAACGAGGTTTTTTCCGACCCCACGCCTTTGCAGCGGCTGATTGCCGAAATGATTGAGCAGGAAGGTCCGATCAGTCT CGAACGGTTCATGGATCTCGCCCTCTATCATCCGGCCTTTGGCTATTATTGCGCGAAAATGCCGCTTGGCGCCGAGGGCG ATTTCGTGACCGCCCCGGAAATCAGCCAGATGTTCGGCGAATTGATCGGTCTATGGGCGGCGGAAGTCTGGCGCACCATG GGGGCACCGGCGCGCATCGCCCTGGTCGAGTTCGGACCGGGGCGCGGTACCTTGATGGCCGACCTTTTGCGGGCGGCGCG TGCCGTGCCGGCATTTTCGGCGGCGATCGAGGTTCATCTCGTCGAAGCTAATCCGGTTCTGCGGCGTGTGCAGGAGCAAA TTCTGGCGGGGACCGGCCACCCCTTGATCTGGCATGAGAGCATGGACATGTTTCTCGCGGGTGGAGAAGAGACGCCTGTC CTCTGCATCGCCAATGAATTTTTCGACTGTCTGCCCCTGCGCCAATTCATTCGCGGGCGAGCGGGCTGGCACGAACGCCT GGTCGGCCTTGCCGCTGGAGGCGGCTTCCAGTTTGGTCTTGCCGCCGAGGCGGCGCCTGAACTCACGGGCATTGCGGCTG AACCCGGGGCGGTGCTGGAAATCAATGCGGGAGCCGTTTCCGCAATGCATCGGCTTGCAACGCGCATCAGCCGCGTCAGT GGCGTCCTCTTGGCGATCGACTATGGTCATGCCGCGCCTTCTGGCCGTTTCGGCGGCGGCGAGACTTTGCAGGCGCTGCG TCATCATCGGCGCGTTGACCCTCTCGAAGCGGCAGGGGAGGCCGATTTGACGGCCCATGTCGATTTCACGCGCCTCACTG AGGCGGCGCGGGCGGGCGGCGCCGAGATTTACGGCCCCGTGACGCAAGGGGAGTTTTTGTGCCGGCTCGGCCTCGTCGAA CGCGCCGAAGCTTTGGCGCGGCGTGCCAATCCGCAACAGATGGAGGCCCTTCACATGGCCGTCGCGCGCCTGGCGGGGGA TGATTTTCCCTCTTCTGGCCTTGCCGGCGACCAAGGGATGAGTCTCCAAGCCGGCATGGGGACTCTGTTCAAGGTTTTGG CCGTGACCGCGCCGGGATTTCCCCTCCCACCAGGATTTTGA
Upstream 100 bases:
>100_bases TGTTCGGCGGCGCCACCATGGGCATGCTCTTGTCCCTGCCCCTGGTGCTGATTGGACTTTTCCTAGTCATCCGGGCCGCG TCCCCCAAGCTGGAGACAGC
Downstream 100 bases:
>100_bases GGATGTTATGAGCGAAGCTTTGGCTCTGCAGGCAAAACTATTGGAAGCCTTGCCGGTCAGGCATGGATTCTTCACCCGCC AGGGCGGTGTCTCGGAGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MNEVFSDPTPLQRLIAEMIEQEGPISLERFMDLALYHPAFGYYCAKMPLGAEGDFVTAPEISQMFGELIGLWAAEVWRTM GAPARIALVEFGPGRGTLMADLLRAARAVPAFSAAIEVHLVEANPVLRRVQEQILAGTGHPLIWHESMDMFLAGGEETPV LCIANEFFDCLPLRQFIRGRAGWHERLVGLAAGGGFQFGLAAEAAPELTGIAAEPGAVLEINAGAVSAMHRLATRISRVS GVLLAIDYGHAAPSGRFGGGETLQALRHHRRVDPLEAAGEADLTAHVDFTRLTEAARAGGAEIYGPVTQGEFLCRLGLVE RAEALARRANPQQMEALHMAVARLAGDDFPSSGLAGDQGMSLQAGMGTLFKVLAVTAPGFPLPPGF
Sequences:
>Translated_386_residues MNEVFSDPTPLQRLIAEMIEQEGPISLERFMDLALYHPAFGYYCAKMPLGAEGDFVTAPEISQMFGELIGLWAAEVWRTM GAPARIALVEFGPGRGTLMADLLRAARAVPAFSAAIEVHLVEANPVLRRVQEQILAGTGHPLIWHESMDMFLAGGEETPV LCIANEFFDCLPLRQFIRGRAGWHERLVGLAAGGGFQFGLAAEAAPELTGIAAEPGAVLEINAGAVSAMHRLATRISRVS GVLLAIDYGHAAPSGRFGGGETLQALRHHRRVDPLEAAGEADLTAHVDFTRLTEAARAGGAEIYGPVTQGEFLCRLGLVE RAEALARRANPQQMEALHMAVARLAGDDFPSSGLAGDQGMSLQAGMGTLFKVLAVTAPGFPLPPGF >Mature_386_residues MNEVFSDPTPLQRLIAEMIEQEGPISLERFMDLALYHPAFGYYCAKMPLGAEGDFVTAPEISQMFGELIGLWAAEVWRTM GAPARIALVEFGPGRGTLMADLLRAARAVPAFSAAIEVHLVEANPVLRRVQEQILAGTGHPLIWHESMDMFLAGGEETPV LCIANEFFDCLPLRQFIRGRAGWHERLVGLAAGGGFQFGLAAEAAPELTGIAAEPGAVLEINAGAVSAMHRLATRISRVS GVLLAIDYGHAAPSGRFGGGETLQALRHHRRVDPLEAAGEADLTAHVDFTRLTEAARAGGAEIYGPVTQGEFLCRLGLVE RAEALARRANPQQMEALHMAVARLAGDDFPSSGLAGDQGMSLQAGMGTLFKVLAVTAPGFPLPPGF
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21396487, Length=351, Percent_Identity=33.3333333333333, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI193211224, Length=389, Percent_Identity=29.8200514138817, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24645885, Length=395, Percent_Identity=32.9113924050633, Blast_Score=182, Evalue=4e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41127; Mature: 41127
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEVFSDPTPLQRLIAEMIEQEGPISLERFMDLALYHPAFGYYCAKMPLGAEGDFVTAPE CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCEECCHH ISQMFGELIGLWAAEVWRTMGAPARIALVEFGPGRGTLMADLLRAARAVPAFSAAIEVHL HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHEEEEEEEE VEANPVLRRVQEQILAGTGHPLIWHESMDMFLAGGEETPVLCIANEFFDCLPLRQFIRGR ECCCHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHCCC AGWHERLVGLAAGGGFQFGLAAEAAPELTGIAAEPGAVLEINAGAVSAMHRLATRISRVS CCHHHHHHHHCCCCCCEECCHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHC GVLLAIDYGHAAPSGRFGGGETLQALRHHRRVDPLEAAGEADLTAHVDFTRLTEAARAGG CEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCEEEECHHHHHHHHHHCCC AEIYGPVTQGEFLCRLGLVERAEALARRANPQQMEALHMAVARLAGDDFPSSGLAGDQGM CEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SLQAGMGTLFKVLAVTAPGFPLPPGF CCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNEVFSDPTPLQRLIAEMIEQEGPISLERFMDLALYHPAFGYYCAKMPLGAEGDFVTAPE CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCEECCHH ISQMFGELIGLWAAEVWRTMGAPARIALVEFGPGRGTLMADLLRAARAVPAFSAAIEVHL HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHEEEEEEEE VEANPVLRRVQEQILAGTGHPLIWHESMDMFLAGGEETPVLCIANEFFDCLPLRQFIRGR ECCCHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHCCC AGWHERLVGLAAGGGFQFGLAAEAAPELTGIAAEPGAVLEINAGAVSAMHRLATRISRVS CCHHHHHHHHCCCCCCEECCHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHC GVLLAIDYGHAAPSGRFGGGETLQALRHHRRVDPLEAAGEADLTAHVDFTRLTEAARAGG CEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCEEEECHHHHHHHHHHCCC AEIYGPVTQGEFLCRLGLVERAEALARRANPQQMEALHMAVARLAGDDFPSSGLAGDQGM CEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SLQAGMGTLFKVLAVTAPGFPLPPGF CCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA