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The map label for this gene is rsmI [H]

Identifier: 182680397

GI number: 182680397

Start: 3974055

End: 3974975

Strand: Reverse

Name: rsmI [H]

Synonym: Bind_3497

Alternate gene names: 182680397

Gene position: 3974975-3974055 (Counterclockwise)

Preceding gene: 182680398

Following gene: 182680396

Centisome position: 95.32

GC content: 64.71

Gene sequence:

>921_bases
ATGAACGACATCAAGGAGCATAAGGGAGACTCCCCGGCACGCGGTGATTTCACCGCTTTGGGCCTGCGGGCCGAAGCCGA
GCCCTTGCGCCCCGGCCTTTATGTGGTGGCGACGCCAATCGGCAATCTCGCCGATATTTCGCTCCGCGCGCTTTCGACCC
TCGCCGCCGCCGATGCCGTCCTTGCCGAGGATACGCGCGTCACCAAAATTCTGCTTGCCCATTACGGCATTGCGACGCCG
CTCGTCGCCTATCACGAACATAATGCCGCTGTGATGCGTCCGCATCTTCTCGCTCGGCTCGAACGAGGCGCGGCCCTGGC
GCTCGTGTCGGACGCGGGAACACCGTTGATTTCCGATCCTGGTTTCAAGCTCGTCGCCGAGGCTTTGGAACGGCAGATCG
CCGTCACGTCGGTGCCGGGAGCCTCGGCGGTTCTCGCCGCCCTCGTCGTCGCCGGCCTGCCGACGGATCGTTTCTTTTTC
GAGGGTTTTTTGCCGGTCAAATCCGGACCGCGCCGGCAACGAATCAGTGCCTTGGCCGCTGTTCCTGGCACGCTCGTCTT
TTTCGAATCGCCGCGCCGGGTGGCCGAAACCCTCGCCGATCTCGCCGCCGTATTGGGCGATCGGCCTTGCGCTTTGGCGC
GAGAACTCACCAAATATTTTGAAACCGTGCGGCGCGGGACCCTGAGCGAACTGGCTACGACTTTGGCCGAGGAACCGCCA
CCCAAGGGCGAGATCGTGCTGCTGGTCGGGGGGCCGACAGAAACAGAGGAAGCCTCCGCCGAGGATCTTGACGCACAGCT
TGGCAAGGCGCTCGAAACCCTGTCGGTCAAGGATGCCGCCGCTGTCGTGGCCGCGGCGACCGGCCAGCCGCGCCGCAAGG
TCTATGCGCGGGCGCTCGAACTGACGACGCGCGGCTCGTGA

Upstream 100 bases:

>100_bases
AGCTCTTGCCTTACGGATCATAAGGGGGACAATCGGCCGATCCTGACGTGCGGATGAGTTTTGGAGACCGGCGCGGTGCC
TTCGATCGGGTGGCGGAATC

Downstream 100 bases:

>100_bases
AATCTAGAAAAGAAGCCCGCCGACGCGCGCACCGCTTTGGCCTTTGGGCGGAATCGCTCGCCATCCTCTGGCTACGCATG
CGCTTCTATCGCATTCTCGA

Product: uroporphyrin-III C/tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNDIKEHKGDSPARGDFTALGLRAEAEPLRPGLYVVATPIGNLADISLRALSTLAAADAVLAEDTRVTKILLAHYGIATP
LVAYHEHNAAVMRPHLLARLERGAALALVSDAGTPLISDPGFKLVAEALERQIAVTSVPGASAVLAALVVAGLPTDRFFF
EGFLPVKSGPRRQRISALAAVPGTLVFFESPRRVAETLADLAAVLGDRPCALARELTKYFETVRRGTLSELATTLAEEPP
PKGEIVLLVGGPTETEEASAEDLDAQLGKALETLSVKDAAAVVAAATGQPRRKVYARALELTTRGS

Sequences:

>Translated_306_residues
MNDIKEHKGDSPARGDFTALGLRAEAEPLRPGLYVVATPIGNLADISLRALSTLAAADAVLAEDTRVTKILLAHYGIATP
LVAYHEHNAAVMRPHLLARLERGAALALVSDAGTPLISDPGFKLVAEALERQIAVTSVPGASAVLAALVVAGLPTDRFFF
EGFLPVKSGPRRQRISALAAVPGTLVFFESPRRVAETLADLAAVLGDRPCALARELTKYFETVRRGTLSELATTLAEEPP
PKGEIVLLVGGPTETEEASAEDLDAQLGKALETLSVKDAAAVVAAATGQPRRKVYARALELTTRGS
>Mature_306_residues
MNDIKEHKGDSPARGDFTALGLRAEAEPLRPGLYVVATPIGNLADISLRALSTLAAADAVLAEDTRVTKILLAHYGIATP
LVAYHEHNAAVMRPHLLARLERGAALALVSDAGTPLISDPGFKLVAEALERQIAVTSVPGASAVLAALVVAGLPTDRFFF
EGFLPVKSGPRRQRISALAAVPGTLVFFESPRRVAETLADLAAVLGDRPCALARELTKYFETVRRGTLSELATTLAEEPP
PKGEIVLLVGGPTETEEASAEDLDAQLGKALETLSVKDAAAVVAAATGQPRRKVYARALELTTRGS

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=249, Percent_Identity=50.2008032128514, Blast_Score=212, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32177; Mature: 32177

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDIKEHKGDSPARGDFTALGLRAEAEPLRPGLYVVATPIGNLADISLRALSTLAAADAV
CCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
LAEDTRVTKILLAHYGIATPLVAYHEHNAAVMRPHLLARLERGAALALVSDAGTPLISDP
HHCCHHHHHHHHHHHCHHHHHHEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
GFKLVAEALERQIAVTSVPGASAVLAALVVAGLPTDRFFFEGFLPVKSGPRRQRISALAA
CHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHH
VPGTLVFFESPRRVAETLADLAAVLGDRPCALARELTKYFETVRRGTLSELATTLAEEPP
CCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PKGEIVLLVGGPTETEEASAEDLDAQLGKALETLSVKDAAAVVAAATGQPRRKVYARALE
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LTTRGS
HHCCCC
>Mature Secondary Structure
MNDIKEHKGDSPARGDFTALGLRAEAEPLRPGLYVVATPIGNLADISLRALSTLAAADAV
CCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
LAEDTRVTKILLAHYGIATPLVAYHEHNAAVMRPHLLARLERGAALALVSDAGTPLISDP
HHCCHHHHHHHHHHHCHHHHHHEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
GFKLVAEALERQIAVTSVPGASAVLAALVVAGLPTDRFFFEGFLPVKSGPRRQRISALAA
CHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHH
VPGTLVFFESPRRVAETLADLAAVLGDRPCALARELTKYFETVRRGTLSELATTLAEEPP
CCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PKGEIVLLVGGPTETEEASAEDLDAQLGKALETLSVKDAAAVVAAATGQPRRKVYARALE
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LTTRGS
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]