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The map label for this gene is 182680396

Identifier: 182680396

GI number: 182680396

Start: 3973681

End: 3974058

Strand: Reverse

Name: 182680396

Synonym: Bind_3496

Alternate gene names: NA

Gene position: 3974058-3973681 (Counterclockwise)

Preceding gene: 182680397

Following gene: 182680395

Centisome position: 95.3

GC content: 61.64

Gene sequence:

>378_bases
GTGAAATCTAGAAAAGAAGCCCGCCGACGCGCGCACCGCTTTGGCCTTTGGGCGGAATCGCTCGCCATCCTCTGGCTACG
CATGCGCTTCTATCGCATTCTCGATCGTCGTTTTTTCGTCAAAGGCGGTGAAATCGACATTGTCGCGCACCGGGGCGATA
CGATCGCTTTTATCGAGGTCAAGGCGCGCCCGACCCTGGATGAGGCTTTGCTGGCGATTGATGCCGTCAAGCGCCGCCGC
CTGTCGCTCGCGGCCCGCTATTGGCTCGCCGCCCATCCTTGGGCCGCGTCCCATGTGTTGCGCGGTGATGCACTCTGCAT
TGCGCCCTGGTGCTGGCCGCGCCATATACCAGCCGCCATCCCGTTGGATATCGGCTAA

Upstream 100 bases:

>100_bases
CCCTGTCGGTCAAGGATGCCGCCGCTGTCGTGGCCGCGGCGACCGGCCAGCCGCGCCGCAAGGTCTATGCGCGGGCGCTC
GAACTGACGACGCGCGGCTC

Downstream 100 bases:

>100_bases
AACGGATGGTGCCGCGGCGCAAATTCTATCGTCCATGCGCCTAATGCGCTATGGTCTCTCCATCACGAGTCGAGATTTGG
GCACGAGGCTTGATTGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKSRKEARRRAHRFGLWAESLAILWLRMRFYRILDRRFFVKGGEIDIVAHRGDTIAFIEVKARPTLDEALLAIDAVKRRR
LSLAARYWLAAHPWAASHVLRGDALCIAPWCWPRHIPAAIPLDIG

Sequences:

>Translated_125_residues
MKSRKEARRRAHRFGLWAESLAILWLRMRFYRILDRRFFVKGGEIDIVAHRGDTIAFIEVKARPTLDEALLAIDAVKRRR
LSLAARYWLAAHPWAASHVLRGDALCIAPWCWPRHIPAAIPLDIG
>Mature_125_residues
MKSRKEARRRAHRFGLWAESLAILWLRMRFYRILDRRFFVKGGEIDIVAHRGDTIAFIEVKARPTLDEALLAIDAVKRRR
LSLAARYWLAAHPWAASHVLRGDALCIAPWCWPRHIPAAIPLDIG

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 14477; Mature: 14477

Theoretical pI: Translated: 11.55; Mature: 11.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRKEARRRAHRFGLWAESLAILWLRMRFYRILDRRFFVKGGEIDIVAHRGDTIAFIEV
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCEEEEEEE
KARPTLDEALLAIDAVKRRRLSLAARYWLAAHPWAASHVLRGDALCIAPWCWPRHIPAAI
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCEEEECCCCCCCCCCCC
PLDIG
CCCCC
>Mature Secondary Structure
MKSRKEARRRAHRFGLWAESLAILWLRMRFYRILDRRFFVKGGEIDIVAHRGDTIAFIEV
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCEEEEEEE
KARPTLDEALLAIDAVKRRRLSLAARYWLAAHPWAASHVLRGDALCIAPWCWPRHIPAAI
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCEEEECCCCCCCCCCCC
PLDIG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA