| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182680379
Identifier: 182680379
GI number: 182680379
Start: 3955102
End: 3956112
Strand: Reverse
Name: 182680379
Synonym: Bind_3479
Alternate gene names: NA
Gene position: 3956112-3955102 (Counterclockwise)
Preceding gene: 182680380
Following gene: 182680377
Centisome position: 94.87
GC content: 55.29
Gene sequence:
>1011_bases ATGCATTCTTATTGGGCTGTGCTCCTCATCCTCGTGCTGATCGGCCTGCCCTTGCCCCTTGCCGCGCAAACGGCCGACAG GAGTGCTCAGGATGATGCGCAAGCGGCGCGGATCGATGCCCTTTTGGCCACGCCAGGGTCGAGAAATTCCCCTCTTGAAA ATTTGATCGCGACCGCTCCGGAGTTGGAGAGGCCGCTGCGGACCCCCCGCTTCACGTTCAATTCCTTGTCTCCCTTTGCG TTTAATTCCAATGCTGAATTGGCGAGACACGGGGGAACATCGACGCTGGAACTCAGCCCCACCCAGAATCTCTCCTGGGC AACGCCTGTGTTCGATCTGCCTCTGCGTCTGTCTTTGAATGCGCGTATGGAAACCGACCGATTCGCGTCATCGAGGGGAG CCGATCTCGATAAGGCTGTCGGTACGGTCCGGCTCCAATATATTAATCCGAATGATGATCAGGGTTTCGCGCCTTATTTC GTTTATGCGCCAAGAGCGGATTTTTTACCGACATTCGAGGATCGATTGGCGATCCGTCATGATTTGAATGTGGGGTTCAA TCAGAGATTCAATTTTGATGAACACATGCAAAGGATCACGCCGACCCGCAACACCAGTGCATCGGCGGTCTGGTCTCTCG GATTGACAATGTTCGGTCAGCGCAGGTTTAGAACTCCGGCGCCGGCATCCTCGGCTTTTTTCATCATCCCTTCGGCGTCC TATGTCATTTCGGAAGAATGGAATGCCAGTCTGGCCGTCCAGATGCTGGGACGATGGTTCGATGCCGATGCGATGGGGTT CTCGCGTCGCGATTTTGAAGTGGAGCCCATCGGCACGCTTGAATATACCGTTCCGGCCTGGGTATTCGGCTCGCCGGAAA CAGCGGCGTTTTTTGGAAGTCCCGCCCTCGATCTGCAAGGATCCTTTGTGCGAAACATCTCGAATCTGGCCGCTCGCAAC TACACCCAATGGACGGGAAGCCTTGTCATCAAAACCGCCTGGCGGTTTTGA
Upstream 100 bases:
>100_bases CCACACGTGCAACAGGACGTCTTGCCGAACCGGATTTTCGTGATTTAGGGTCGAAAGGACATAACCCTGTCGAGCCGGAC AAAGCCGATCCGAGTTTAAT
Downstream 100 bases:
>100_bases TGAATAATGATCGGAGCATCTGATCTTTCTCGTTCCAAGGGGGCCGGTCAGGACCGGCGCAGAACTATCCTGCCCTCGAT TTGCGGCGCTACTTGCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MHSYWAVLLILVLIGLPLPLAAQTADRSAQDDAQAARIDALLATPGSRNSPLENLIATAPELERPLRTPRFTFNSLSPFA FNSNAELARHGGTSTLELSPTQNLSWATPVFDLPLRLSLNARMETDRFASSRGADLDKAVGTVRLQYINPNDDQGFAPYF VYAPRADFLPTFEDRLAIRHDLNVGFNQRFNFDEHMQRITPTRNTSASAVWSLGLTMFGQRRFRTPAPASSAFFIIPSAS YVISEEWNASLAVQMLGRWFDADAMGFSRRDFEVEPIGTLEYTVPAWVFGSPETAAFFGSPALDLQGSFVRNISNLAARN YTQWTGSLVIKTAWRF
Sequences:
>Translated_336_residues MHSYWAVLLILVLIGLPLPLAAQTADRSAQDDAQAARIDALLATPGSRNSPLENLIATAPELERPLRTPRFTFNSLSPFA FNSNAELARHGGTSTLELSPTQNLSWATPVFDLPLRLSLNARMETDRFASSRGADLDKAVGTVRLQYINPNDDQGFAPYF VYAPRADFLPTFEDRLAIRHDLNVGFNQRFNFDEHMQRITPTRNTSASAVWSLGLTMFGQRRFRTPAPASSAFFIIPSAS YVISEEWNASLAVQMLGRWFDADAMGFSRRDFEVEPIGTLEYTVPAWVFGSPETAAFFGSPALDLQGSFVRNISNLAARN YTQWTGSLVIKTAWRF >Mature_336_residues MHSYWAVLLILVLIGLPLPLAAQTADRSAQDDAQAARIDALLATPGSRNSPLENLIATAPELERPLRTPRFTFNSLSPFA FNSNAELARHGGTSTLELSPTQNLSWATPVFDLPLRLSLNARMETDRFASSRGADLDKAVGTVRLQYINPNDDQGFAPYF VYAPRADFLPTFEDRLAIRHDLNVGFNQRFNFDEHMQRITPTRNTSASAVWSLGLTMFGQRRFRTPAPASSAFFIIPSAS YVISEEWNASLAVQMLGRWFDADAMGFSRRDFEVEPIGTLEYTVPAWVFGSPETAAFFGSPALDLQGSFVRNISNLAARN YTQWTGSLVIKTAWRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37409; Mature: 37409
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSYWAVLLILVLIGLPLPLAAQTADRSAQDDAQAARIDALLATPGSRNSPLENLIATAP CCHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHCCH ELERPLRTPRFTFNSLSPFAFNSNAELARHGGTSTLELSPTQNLSWATPVFDLPLRLSLN HHHHCCCCCCEECCCCCCEEECCCCHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEC ARMETDRFASSRGADLDKAVGTVRLQYINPNDDQGFAPYFVYAPRADFLPTFEDRLAIRH CCCCHHHHHCCCCCCHHHCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHEEEEE DLNVGFNQRFNFDEHMQRITPTRNTSASAVWSLGLTMFGQRRFRTPAPASSAFFIIPSAS CCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCCEEEEEECCC YVISEEWNASLAVQMLGRWFDADAMGFSRRDFEVEPIGTLEYTVPAWVFGSPETAAFFGS EEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEECCEEEECCCCCEEEECC PALDLQGSFVRNISNLAARNYTQWTGSLVIKTAWRF CCCCCCCHHHHHHHHHHHCCCCHHCCEEEEEEECCC >Mature Secondary Structure MHSYWAVLLILVLIGLPLPLAAQTADRSAQDDAQAARIDALLATPGSRNSPLENLIATAP CCHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHCCH ELERPLRTPRFTFNSLSPFAFNSNAELARHGGTSTLELSPTQNLSWATPVFDLPLRLSLN HHHHCCCCCCEECCCCCCEEECCCCHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEC ARMETDRFASSRGADLDKAVGTVRLQYINPNDDQGFAPYFVYAPRADFLPTFEDRLAIRH CCCCHHHHHCCCCCCHHHCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHEEEEE DLNVGFNQRFNFDEHMQRITPTRNTSASAVWSLGLTMFGQRRFRTPAPASSAFFIIPSAS CCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCCEEEEEECCC YVISEEWNASLAVQMLGRWFDADAMGFSRRDFEVEPIGTLEYTVPAWVFGSPETAAFFGS EEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEECCEEEECCCCCEEEECC PALDLQGSFVRNISNLAARNYTQWTGSLVIKTAWRF CCCCCCCHHHHHHHHHHHCCCCHHCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA