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The map label for this gene is secB

Identifier: 182680103

GI number: 182680103

Start: 3640434

End: 3640916

Strand: Reverse

Name: secB

Synonym: Bind_3200

Alternate gene names: 182680103

Gene position: 3640916-3640434 (Counterclockwise)

Preceding gene: 182680105

Following gene: 182680098

Centisome position: 87.31

GC content: 55.69

Gene sequence:

>483_bases
ATGGCTGATGGTAACGGAACGCAAGAAACGCAAGATCAGGCACCCGCGATCAATGCGATGGTGCAATATACGAAGGATTT
TTCCTTCGAGAACCCGAACGCGCCGCGTTCCTTAGGGCCACAGGAAAAGGCCCCGAATATCGCGATTCAGGTTCATGTCA
ACGCGCAACAATTGGCCGAGTCCGATTTCGAGGTGAATATCGTCCTGGAAGGCTCGGCGGGCGAGGGCGCCAATACTCTG
TTCAAGTTCGAGCTCGATTATGCGGGCATGTTCCGCTTGCTCAATATCTCGCCGAATGACATGCATCCGGTCGTGATGAT
CGAATGTCCGCGCCTGTTGTTTCCCTTTGCCCGGCAGATCATTGCCGATGCAGTTCGCAGCGGCGGATTCCCGCCCCTCT
ATATTGATCCGATCGATTTCGCCGCGCTCTACCGCAAGCGGCTTGATGAAGTGGCCGCCAGCGCACCACAGCTGAAATCC
TGA

Upstream 100 bases:

>100_bases
AGACTTGCGCCAGGCTTGTGTGGGGTGCGGGCACGGCTCACCGCATTGGCTTGTGGAAGGCATTTATCCGTGCTAGGGGG
CTCGCCGCAGGAGACAAATC

Downstream 100 bases:

>100_bases
AAAAGCAGTAAAAGTTTAGACCCAAAAGTGGAGGACACTTTTGGGTCTGATGTTTAGGCGCTGCGCCGCCCCCATCCCAA
CAGACTCCAAACCGTCTGTT

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MADGNGTQETQDQAPAINAMVQYTKDFSFENPNAPRSLGPQEKAPNIAIQVHVNAQQLAESDFEVNIVLEGSAGEGANTL
FKFELDYAGMFRLLNISPNDMHPVVMIECPRLLFPFARQIIADAVRSGGFPPLYIDPIDFAALYRKRLDEVAASAPQLKS

Sequences:

>Translated_160_residues
MADGNGTQETQDQAPAINAMVQYTKDFSFENPNAPRSLGPQEKAPNIAIQVHVNAQQLAESDFEVNIVLEGSAGEGANTL
FKFELDYAGMFRLLNISPNDMHPVVMIECPRLLFPFARQIIADAVRSGGFPPLYIDPIDFAALYRKRLDEVAASAPQLKS
>Mature_159_residues
ADGNGTQETQDQAPAINAMVQYTKDFSFENPNAPRSLGPQEKAPNIAIQVHVNAQQLAESDFEVNIVLEGSAGEGANTLF
KFELDYAGMFRLLNISPNDMHPVVMIECPRLLFPFARQIIADAVRSGGFPPLYIDPIDFAALYRKRLDEVAASAPQLKS

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family

Homologues:

Organism=Escherichia coli, GI1790038, Length=135, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECB_BEII9 (B2ICZ5)

Other databases:

- EMBL:   CP001016
- RefSeq:   YP_001834249.1
- GeneID:   6199169
- GenomeReviews:   CP001016_GR
- KEGG:   bid:Bind_3200
- HOGENOM:   HBG294212
- OMA:   GFPPLMI
- ProtClustDB:   PRK05751
- GO:   GO:0005737
- HAMAP:   MF_00821
- InterPro:   IPR003708
- Gene3D:   G3DSA:3.10.420.10
- PRINTS:   PR01594
- TIGRFAMs:   TIGR00809

Pfam domain/function: PF02556 SecB; SSF54611 SecB

EC number: NA

Molecular weight: Translated: 17568; Mature: 17437

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGNGTQETQDQAPAINAMVQYTKDFSFENPNAPRSLGPQEKAPNIAIQVHVNAQQLAE
CCCCCCCCCCHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHCC
SDFEVNIVLEGSAGEGANTLFKFELDYAGMFRLLNISPNDMHPVVMIECPRLLFPFARQI
CCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHH
IADAVRSGGFPPLYIDPIDFAALYRKRLDEVAASAPQLKS
HHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ADGNGTQETQDQAPAINAMVQYTKDFSFENPNAPRSLGPQEKAPNIAIQVHVNAQQLAE
CCCCCCCCCHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHCC
SDFEVNIVLEGSAGEGANTLFKFELDYAGMFRLLNISPNDMHPVVMIECPRLLFPFARQI
CCCEEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHH
IADAVRSGGFPPLYIDPIDFAALYRKRLDEVAASAPQLKS
HHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA