Click here to switch to the map view.

The map label for this gene is 182680077

Identifier: 182680077

GI number: 182680077

Start: 3621294

End: 3621572

Strand: Reverse

Name: 182680077

Synonym: Bind_3174

Alternate gene names: NA

Gene position: 3621572-3621294 (Counterclockwise)

Preceding gene: 182680078

Following gene: 182680066

Centisome position: 86.85

GC content: 56.63

Gene sequence:

>279_bases
GTGAAGAAAGAGCATATCACTCTCCCGGCTGATCCTGCCGACATCGAAGATTTCGATGTGAGCCCCGAGGCGATGGATCG
CGGCCAACGCGCCAGGATGATCCGCAAGACAAGGACAGCTCTAGGCCTATCGCAAGCTGAATTTGCCAGCCGCTTCCGTG
TTCCCGTCGGCACGTTGCGCGATTGGGAACAAGCCAGAGCTACAGCGCCAGATTTCGCTATCGCCTATATTCGGGTTATA
GGAATGCACCCGGATCTGGTCGCCAAGGTGATGGCTTGA

Upstream 100 bases:

>100_bases
GAGTTTGTCGAGGGAAAACAGAGGTAAAAGGGCCCTTGTGCGTCCTTTGTTTGGCGAAACGATCTTCCCCGCTTCATTTC
CGGGAGAAGGAGCAACAAAG

Downstream 100 bases:

>100_bases
TGACCGCCGTCTTCAGAGCCTCTTCGGCCCATTGATTGAGGCTCTTGCCAGACAGTTGAGCCGTTTCCTTCATCGCCACA
CGACTTTTCCGCCTCAAAAC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKKEHITLPADPADIEDFDVSPEAMDRGQRARMIRKTRTALGLSQAEFASRFRVPVGTLRDWEQARATAPDFAIAYIRVI
GMHPDLVAKVMA

Sequences:

>Translated_92_residues
MKKEHITLPADPADIEDFDVSPEAMDRGQRARMIRKTRTALGLSQAEFASRFRVPVGTLRDWEQARATAPDFAIAYIRVI
GMHPDLVAKVMA
>Mature_92_residues
MKKEHITLPADPADIEDFDVSPEAMDRGQRARMIRKTRTALGLSQAEFASRFRVPVGTLRDWEQARATAPDFAIAYIRVI
GMHPDLVAKVMA

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10324; Mature: 10324

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEHITLPADPADIEDFDVSPEAMDRGQRARMIRKTRTALGLSQAEFASRFRVPVGTLR
CCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHH
DWEQARATAPDFAIAYIRVIGMHPDLVAKVMA
HHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MKKEHITLPADPADIEDFDVSPEAMDRGQRARMIRKTRTALGLSQAEFASRFRVPVGTLR
CCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHH
DWEQARATAPDFAIAYIRVIGMHPDLVAKVMA
HHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA