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The map label for this gene is ydhD [C]

Identifier: 182680021

GI number: 182680021

Start: 3562519

End: 3562860

Strand: Reverse

Name: ydhD [C]

Synonym: Bind_3117

Alternate gene names: 182680021

Gene position: 3562860-3562519 (Counterclockwise)

Preceding gene: 182680022

Following gene: 182680020

Centisome position: 85.44

GC content: 56.14

Gene sequence:

>342_bases
ATGTCTGCCATCAACGACCTCATCCAATCCATCGTCGACAAGAACGATGTCGTGCTTTTCATGAAGGGCACCCCGAACTT
CCCGCAATGCGGCTTCTCCGGCCAGCTCGTTCAGATCCTCGGCTATCTCGACGTCAACTACGAGCACGTGAACTGCCTCG
AAAATGACGAGATCCGTCAGGGCATCAAGGACTTCTCCAACTGGCCGACGATTCCCCAGCTGTATGTCAAGGGTGAGTTC
ATCGGCGGTTGCGACATTGTCCGCGAAATGTTCCAGTCGGGCGAACTGGCCACGCACTTCTCCGGTAAGGGCATCGACGT
CAAGCAGCCGACCAAGGCGTAA

Upstream 100 bases:

>100_bases
CACTCATTGACCAGGCGCCGGAACCGGTCCTAGATTTGCTTCGCCTCGACTTCACGCGTGCTGACGGAAGTCTTGACCCC
ACGCTCCAGAAAGGACTGCC

Downstream 100 bases:

>100_bases
GCCTTCGGGACGCCATTTCTGCCTGATGTGCTTTCGAGGCAGAGGTCTGATCATCATCAGGCCCCTGCCTTTGTTTTTTG
CTGTTTTGTAAACGCTTGTT

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSAINDLIQSIVDKNDVVLFMKGTPNFPQCGFSGQLVQILGYLDVNYEHVNCLENDEIRQGIKDFSNWPTIPQLYVKGEF
IGGCDIVREMFQSGELATHFSGKGIDVKQPTKA

Sequences:

>Translated_113_residues
MSAINDLIQSIVDKNDVVLFMKGTPNFPQCGFSGQLVQILGYLDVNYEHVNCLENDEIRQGIKDFSNWPTIPQLYVKGEF
IGGCDIVREMFQSGELATHFSGKGIDVKQPTKA
>Mature_112_residues
SAINDLIQSIVDKNDVVLFMKGTPNFPQCGFSGQLVQILGYLDVNYEHVNCLENDEIRQGIKDFSNWPTIPQLYVKGEFI
GGCDIVREMFQSGELATHFSGKGIDVKQPTKA

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=99, Percent_Identity=53.5353535353535, Blast_Score=114, Evalue=1e-26,
Organism=Homo sapiens, GI95113651, Length=100, Percent_Identity=47, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1787943, Length=96, Percent_Identity=47.9166666666667, Blast_Score=107, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17556042, Length=105, Percent_Identity=48.5714285714286, Blast_Score=109, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71988153, Length=98, Percent_Identity=43.8775510204082, Blast_Score=97, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71988159, Length=89, Percent_Identity=42.6966292134831, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6325198, Length=99, Percent_Identity=52.5252525252525, Blast_Score=112, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6320303, Length=89, Percent_Identity=47.1910112359551, Blast_Score=94, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6321022, Length=86, Percent_Identity=47.6744186046512, Blast_Score=93, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24642023, Length=98, Percent_Identity=47.9591836734694, Blast_Score=112, Evalue=4e-26,
Organism=Drosophila melanogaster, GI19921242, Length=99, Percent_Identity=41.4141414141414, Blast_Score=101, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12613; Mature: 12481

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAINDLIQSIVDKNDVVLFMKGTPNFPQCGFSGQLVQILGYLDVNYEHVNCLENDEIRQ
CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHH
GIKDFSNWPTIPQLYVKGEFIGGCDIVREMFQSGELATHFSGKGIDVKQPTKA
HHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SAINDLIQSIVDKNDVVLFMKGTPNFPQCGFSGQLVQILGYLDVNYEHVNCLENDEIRQ
CHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHH
GIKDFSNWPTIPQLYVKGEFIGGCDIVREMFQSGELATHFSGKGIDVKQPTKA
HHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]